Nlug004359.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- pnr_3
- Assembly
- GCA_014356525.1
- Location
- chr8:5688774-5726362[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5 2.5e+04 -7.2 4.2 21 26 43 48 41 48 0.80 2 3 1.4 6.7e+03 -2.8 0.1 20 26 85 91 84 93 0.80 3 3 2.9e-16 1.4e-12 47.4 6.0 1 35 575 608 575 609 0.97
Sequence Information
- Coding Sequence
- TGCCTAGCAAAATTCCAGTTAAACCAAGGAAAATGCTCAGGAATTGCTCGCATGCTAGTTGCATTGAGAAGCGTCATGACAAATATCAGCATGTGTTCTGTGCCTCCAAAGTTTTATGAACTTTGTCGCCTTTGTTTATCATGCGAAGGTGCAAAGGTGTCTATTTTCGACGATTCTGGAACTCAACGTAATTTTCCAATGAAGATAAGCGCTTGTCTATCTATCTTAGTGACGGAACAAGATATGCTTCCCTCTTCATTGTGTCATCGCTGTGTTTATAAGCTGGACGTTCTTAATGAGTTCAGGGAAGTTTCGAGAAAGACTGATGCTATCCTCAAGCAATATTTAAACAGATCTGAGGGACTGACACACGACGAGCATAGTAATACACTGCAGAAAAGCGCGATCCCCGAGCTAAATGGATGTAATAGCGGTCAAAATGTGACAATGTTCCATGCGGACGATCAGTTGGAAAACCTGAAAAGTCTCGCCACAATAGCAGCTTCGAATTGTTTCCTGCCCGCCAAGCCGAAATGCAACGATCACGGGGGATCACTGATCGTGAATAACGGCACAATCAACCTTGAAGAGAAAGAACCCGAAACGGGAGAGAGATATCGGCCCGCCGAGGAGAAGGAGAGAGACAGAGTCCAGAGAGAGCGAGAGCTGGAAACAACGGTAGTGAAGAGAAATAATGACTACGCAGTGGAAACTACGGTCGACCATGTGGTAGTGAGGAAAAACAATGAGTACACAGTGGAAAATACGGTCGACCATGTGGAAGTGAGGAAAAATAATGATTATGGAGTGGAAAATACGGTCGACCATGTGGTAGTGAGGAAAAATAATGATTATGGAGTGGAAAATATGGTCGACCGTGTGGTAGTGAGGAAAAACAATGACTATGCAATGGAAAATACGGTCGACCGTGTGGTGGTGAAGAAAAATAATGACTACAGTACTGGCAACTTCACAATAAAATGTGAGCCGGATGAAGAGGAAGCAGAGTTGTACATTCAGAAGACGGATTCTATGAGTAGTGACGATGAGAGCGGGGAGGACTCGGATGGGAGGACTACACCGGTCCAAAATGGCCGCCGCCGTGATGAGTCAAGGGTTGCAGAGAGAGAGAACAACGAGTCCAAGATTGACACGAAAAGTTTGTTGAGAACACTGATGTCGGCCGCTTCATTGTTTAGCGCGCAACAGAATTCGTTCGCGACGGATATCGCGTCGCATTGCACCAAACTGCCGCCTGCGTCTTTGTCACCTCAGACTCCTGGAAGCCGTGGTGAAACACAGCGTCACAGCAGCGGTCGACGGAAACAGAGTTGTCCTCTGCGCTCGACAGAGGTGCCCTTCCTCAAGACCAAACCCACCTCAACCACCCCCAGTCGCAGTCCCAGCCCCACACCTCCGCCACCCACACACCACCACCAGCAGCAGCCGCCCCCGGGGGCAGTGCGGCCGGTCAGCCGCTCCACGGAGGCCATCAGTCGGTTGCTGGAGGCGGCGCACTACACAGAGCGCAGCGAGCGAGGCGAGATCTCGGACAATGAGGCTGATGATGACATCGAGGAGGTGGAGATTGAGTCTGAGATGGATGTCGAGATAGAGCAGGATGCCGTCGGCAGCGCCCAGTGGTACACTAAGTCTGTGTTTCGGCCTAATTCACGGCAGCAGCAACAGCAACCATCGCTAGCGAAACGCGTGGACCTGGCTTGCAGCAACTGTGGCACCCGAACTACGACCATCTGGCGTCGCAACCGGTTGGGTGAGATGGTGTGCAACGCATGCGGTCTCTACTACAAGCTGCACAATGTCAACCGGCCGGCCACCATGCGTCGAGACACTATCCACACAAGGCGGCGACGCCCCAAGGGAGAGAAGATCACATTAAGGCGCAACAGCAAAAAAGCCAACAGCGATTGTGCAAGTGGTGGCAACAGTGGCAGCGACGAATGTTGCGACGATATGTTGGCAGCACTGCGTCGACAAATCCAGCCGCACCTCATGTTGGCAGCACTGCAGCAACAGTCGCCACCCTTCTCCCCCGCCGCCCATCACTCTCCCTCCATCATCTACAAAAAAGAACTCGCCAGCGACGAAACGCCTCTAAATCTCGTCGCTAGCGATCTAAAAAACATCCTAGAAATTGCCCAATATGTCAGGATACTTGTCGACAAGGTTGTGTAG
- Protein Sequence
- CLAKFQLNQGKCSGIARMLVALRSVMTNISMCSVPPKFYELCRLCLSCEGAKVSIFDDSGTQRNFPMKISACLSILVTEQDMLPSSLCHRCVYKLDVLNEFREVSRKTDAILKQYLNRSEGLTHDEHSNTLQKSAIPELNGCNSGQNVTMFHADDQLENLKSLATIAASNCFLPAKPKCNDHGGSLIVNNGTINLEEKEPETGERYRPAEEKERDRVQRERELETTVVKRNNDYAVETTVDHVVVRKNNEYTVENTVDHVEVRKNNDYGVENTVDHVVVRKNNDYGVENMVDRVVVRKNNDYAMENTVDRVVVKKNNDYSTGNFTIKCEPDEEEAELYIQKTDSMSSDDESGEDSDGRTTPVQNGRRRDESRVAERENNESKIDTKSLLRTLMSAASLFSAQQNSFATDIASHCTKLPPASLSPQTPGSRGETQRHSSGRRKQSCPLRSTEVPFLKTKPTSTTPSRSPSPTPPPPTHHHQQQPPPGAVRPVSRSTEAISRLLEAAHYTERSERGEISDNEADDDIEEVEIESEMDVEIEQDAVGSAQWYTKSVFRPNSRQQQQQPSLAKRVDLACSNCGTRTTTIWRRNRLGEMVCNACGLYYKLHNVNRPATMRRDTIHTRRRRPKGEKITLRRNSKKANSDCASGGNSGSDECCDDMLAALRRQIQPHLMLAALQQQSPPFSPAAHHSPSIIYKKELASDETPLNLVASDLKNILEIAQYVRILVDKVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -