Nlug002352.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- RCOR3
- Assembly
- GCA_014356525.1
- Location
- chr11:23970763-23998942[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1 6.1e+03 -2.1 0.0 20 41 25 49 23 51 0.77 2 3 9.3e-09 9.3e-06 26.1 0.0 3 46 110 153 108 153 0.96 3 3 1.1e-11 1e-08 35.6 0.0 3 46 385 428 384 428 0.98
Sequence Information
- Coding Sequence
- ATGGGCAGGAAAAGACCGAATGACGTTTTTGACGTTCTCTTGGAGCCGTGGACAGGCGAGAAAATAAGAGTCGGTCGAGACTTTCAAGCTGTATGTCCTGAATTAATCCCAGTTCCAGATCGCAGACTAGAACAATGTCCAGACAGAGCTCTACTCGTCTGGTCACCCACCTCAGACATCTCAGACACAAAATTGGACGAATACATATCGCTGGCCAAAGAGAAGTACGGCTACAATGGAGAACAAGCGCTGGGCATGCTGTTCTGGCACAAACATGACCTGGAGCGCGCCATCTTGGATCTGGCCAACTTCACCCCGTTCCCCGACGAGTGGACGGTCGAGGACAAGGTGCTATTCGAGCAAGCCTTTCAGTTCCATGGCAAGAGCTTTCACAGGATACGACAGATGTTGCCAGACAAATCGATAGCCACACTGGTGAAGTACTACTACTCGTGGAAGAAGACACGCAGCAGAACCAGCCTGATGGACCGCCAGGCGAGGAAGCTGGCAGGAAGGGGTGGCCAGGGGGTGGGGGGTGAGGAGGGGGGTGCCGCCTCCGATGCCAACTCTGAGATGGGCTCCAACACAGACTCTGACTCCGACGAAAAGAAATGGACAATCCATAGAGGAATTCGTCGCAAAAGTGGGTCACCACCACGAACCTCCGCCTCCGAGGATCCAGCCAAAGAAAAGGAAGGTTCTGAAGGCAAGTCGAATGTTTGTTCGAATTGTGGCGTGAGCTGCACCAATTTGCAGCAGGCTGCCGGAAAAGGGGGCATGTGTGGTACTTGCCATACTCACTGGAGACGCACAGGCAACGTCCGGCCGACACATGGGCCGGTGAAGCCACGCGACCGCCACAGTCACATGGCGATGCTGCGGCACAAGCGCAAGCCACCACGTGGCATGTACATCAACCACGACGACCTCCTCGCCATGGCCACCACCAGTCACGGCCACGGCCACGGCCAAGGTCACGGCCAAGGTCACGCGGCCAGTGGCGAAAACATGCTCAAGGCCATGGATCGCGAGATCGTGTCGCTCAAACGACAGGTTCAAAACAACAAGCAAGTGCTGTCATCTCTGAAAAGGAAGACTAGTGAAGGAATTGAGACAATGCGACCCCCGGACACCAACAACAGGATCAACGCCCGCTGGACTAACGATGAACTCCTCTTAGCTGTGCAAGGTATGCGCAAATATGGCAAGGACTTCAGCGCCATTGCAGAGGTGATTGGTACCAAGACGGAAGCGCATCTGAGGTCGTTCTTTGTCAACTACCGGCGACGCTACAATTTGGACGCTGTTCTTGCCGAGTATGAAGCTGAGCATGGCCCTATTGTCGATCCTACCGAAAAGATGGAAGTGGACAGCAGTACACCAGTGGCCAGTAGCGACGCGACGCCAGTAGCGGCGTCTAGCGCCAGTTCGGTGCCGCTAGCATCTGCTGGTGTAGTCAGTACTGGCAGTTCACCTGCGGCCACGCTGCCCAAATCGGTCGCCAGTAGCGCTAGTGTCACCGCCAAAACGCCAGTCGCTACTAAGTGA
- Protein Sequence
- MGRKRPNDVFDVLLEPWTGEKIRVGRDFQAVCPELIPVPDRRLEQCPDRALLVWSPTSDISDTKLDEYISLAKEKYGYNGEQALGMLFWHKHDLERAILDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIATLVKYYYSWKKTRSRTSLMDRQARKLAGRGGQGVGGEEGGAASDANSEMGSNTDSDSDEKKWTIHRGIRRKSGSPPRTSASEDPAKEKEGSEGKSNVCSNCGVSCTNLQQAAGKGGMCGTCHTHWRRTGNVRPTHGPVKPRDRHSHMAMLRHKRKPPRGMYINHDDLLAMATTSHGHGHGQGHGQGHAASGENMLKAMDREIVSLKRQVQNNKQVLSSLKRKTSEGIETMRPPDTNNRINARWTNDELLLAVQGMRKYGKDFSAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLAEYEAEHGPIVDPTEKMEVDSSTPVASSDATPVAASSASSVPLASAGVVSTGSSPAATLPKSVASSASVTAKTPVATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -