Basic Information

Insect: Nilaparvata lugens
Gene Symbol: -
Assembly: GCA_014356525.1
Location: chr12:23153358-23171255[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2e-09 3.8e-07 30.2 0.0 2 40 121 159 120 164 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2e-09	3.8e-07	30.2	0.0	2	40	121	159	120	164	0.90

Sequence Information

Coding Sequence: ATGGCCGACATTCTCAAAGGCCTTGAGCTCCATGGCGACGCGGAGGGGCGCGTGAATGCCCTGGGTGTTTCGCATTACGGCCATGTGGAGGCGCTGCTGGTTCTTCTGATAGTTTCGTTCGGATGTCTCCAGGGGGTGCTGGTAGAGGGTGGGCCTCGCCGCACCCAGGCCAAACGTCATCGGGTCCGGGATGCCGTACTCGTTCTGCTTGTCGGCATTTGGCTGGCGGTGGAAGCCTGTCGACTTCTCTTTCAGTGGAGAAGAGTGGTATGGTATCAGATAGCAGCTGTAAGAGCCAAATATTGGATTCATTGGGATTCCAAGATGCCTGGAGCCAAGAGTACATTTTTAAGCTACAATGAAGATGCTATGAAAGCTGCAGTTGAAGATGTGCTCCTGCACAAAACATCTATCCGGACAGCTGCAAAGAAATTTGGAGCTCCTAGAACAACATTGAAGTATAAATTGGAGGGTAAATCACCGATGGAAAGAAGAATGGGCCCACCTTCCATTCTATCAAAAGAAGAGGAGGCTAAAATAAGCAGATGGGTGGAGAACATGGCAAAAGCTGGTTTTCCAATCACTATTGAACAGTTATGCATCAGTGTGGAGAGATGCTTAAAAGCTGTGAAACGTGATTCACCCTTCAAAGATGGAAGACCGGGCAGAACATGGGTCAAGAGTTTTCTTCGAAGAAATCCTCTTATTTCAAAAAGGGTCTCTCAAAATTTGACTGTCTCACGGGCAGCAGTTACTAGGGAAAGCATAATCAACTGGTTTTCAGAAGTGGAGCTCATGGTGATGAAAAGCTTTTGGAAGACCCGTCTCGAATATTTGAGTCAGCTTTTTTTTTTAAATCCAAAAGGCCCTAAAGTGCTTACCAGGAAAGGTGATAAAACAGTTTATCAGAAAGTTAATGCTGATGAGAAAGAGTGCATCACAGTATTGGTAACTGGTAGTGCAAGTGGTGTTGTAGCTCCAACAACCTGTTTGTTCAAATACAAACGTATTCCTCAAGAAATTGCAGATAATTATCCAAAGGAGTGGGGGCTAGGAAAAACTGATTCAGGGTGGATGACTTGTGAAGCATTCTTTGAATTCATTGCTGATATTTTTCATCCATGGTTTGTGGAAAAACAAATCACTTTACCAGTTATCCTTTTCATTGATGGCCATGCTTCACATTTATCTTTCCAGACAAGCAAATTCTGTGAAGAAAATGGGATAATTCTGGTGGCTTTGCTACCCAATGCCACTCACATTTTGCAGCCCATGGATGTTGCTGTTTTTAGAAGTCTCAAAGAAGGATGGAAGAATAAAGTACACAAGTGGAGGCTGGAAAACATTATTAAAGACGGTTCTCATCTCTTGAAAAAGAATGATTTTGCAAAGCTATTACAAGAAGTGATAGATGAGAACGTTACAGAATCGATGTTGTCCAATGGATTCAAGAAATGTGGATTGTACCCATGGAATCCTCAAATAATTGAGGTACCAGGCCAAGGATCATTCAAAGAGCAAGATGAAAGTGACTCAACTGAGCTGAAAATACAGTATTTTAAGCAAGGATTACGTTTCTTGAATGACATGATAGGGAAAGAAAAGCTCTCTGTTTTTGAAGCATCAACTGAAACATGTTGTGGAGATCCACTGGACACATCTTTGTTCAAGTGCTGGAAAAAAACAAAAATGGAACTGGAGAGACTTGAGCTGGATGTTAGGAACAATATAATTTCTGCCAACCTGTCACTGAATGATGATGCTGTAGAGTCGCCTGCTGATGGAAACAACGTTGATGAAACCCCTCCAACAGATATTGATGTAATTTTTGAGTTGTCTGGAACTGAGCCATGTGATTTGGGGAACAACGTTTCTGCCAACATATCACTGAATAATGCTGCTGTGGAGTTTCCTGATGATGAAAACAACATTAATGAAGCATGTTTAACAGATATAGATAACAATAAGAGAAGAAGGGTCGGAAGAGAAAGAGTACCAACAATAGTCTCAGGAAAACTTTGTCAACAATATTTTGAGAATAAAAGGAAGAAGAGAGAAGAATTTGAGCGATTGAAGATAGAGAGAGCCAACGAGAGAAAACGAAAGAAGGAAGAGATTGAGAAGCAGAAACAGAATAAACTTGAGTTTAAAAAGTTGAAAAGTAAGCAGAAGAAAATTCTACCAAACACTGATAGCTCTGATTCAAGTGTTGAATTTTCATGTGAAGAAAGTGAGTTCTCAGAGCCCTCAGATCATGTGGACCCTGATAATCATGCTTGGAAGCCTTTGCTGAAGAATATTGATGAGCATGTTATTTTTGAGTATGACAGTGATTATTATCCTGGAAAAATAATTAATTTCACTGAAGCTACAGCAAAAATCTCATCAATGGTTAAGTGTGGTCGCCTATGGAAATGGCCAGAGAGGCCTGATGTGCTAGAATACCAGTGGAAGTGTGTTAAATCTCACATAGATGAGCCCAAAAAAACCAGTAAAACTCGTAATGTCTACTCTGTTCCAGAGTTGGATTTCCCGAATACCTCTGTTCAATGTGATGATTGCTCGGCAGTATTTGTAGGGGCGTTGGATGTTTCGTTGGTTGGAGGATCTTTAGGCGTTGTTTCTTTACTTTCAACCACTGGTTTCACTTCTTTTGATGGAACAGAAGCAGCAACAGCATCTGGAGCATTCTTGGTTGCTGGTGTATTTGTAGATGCAACGGGAGCATTTTTCGGTGCAGCAGCCGTTGCAGATGTCTTTGTAGATGTTGCAACTGTATCATTTTTCGGTGCAGCAACAGTTGCAGATGCATTACTGGATTTTGCAACTGTATCATTTTTCTGTGCAACAGTTGCAGATGTCTTTGTAGATGTTGCAACTGTATCATTTTTCGGTGCAGCAGCCGTTGCAGATGGAGCAACAGTTGAACGTACTGGACAAAACGCACTCACTTTTCAAGTCACCTCCAAAATCAGCATACCATTTGCTGCTCGCGGCCTGCTTGCCCATGGACCCGGATCTCGTCCGACCCGACCCTATCGAGTCGGCTCGCTTGCGGGGCACCTGTTGGCCTTGACCTTGAGTCGCTTGTCCTTGACCTTGAGCGGGCTGACCTTGACCTCCAGACATGCGGCGCTGCCTGCCATGCACTGA
Protein Sequence: MADILKGLELHGDAEGRVNALGVSHYGHVEALLVLLIVSFGCLQGVLVEGGPRRTQAKRHRVRDAVLVLLVGIWLAVEACRLLFQWRRVVWYQIAAVRAKYWIHWDSKMPGAKSTFLSYNEDAMKAAVEDVLLHKTSIRTAAKKFGAPRTTLKYKLEGKSPMERRMGPPSILSKEEEAKISRWVENMAKAGFPITIEQLCISVERCLKAVKRDSPFKDGRPGRTWVKSFLRRNPLISKRVSQNLTVSRAAVTRESIINWFSEVELMVMKSFWKTRLEYLSQLFFLNPKGPKVLTRKGDKTVYQKVNADEKECITVLVTGSASGVVAPTTCLFKYKRIPQEIADNYPKEWGLGKTDSGWMTCEAFFEFIADIFHPWFVEKQITLPVILFIDGHASHLSFQTSKFCEENGIILVALLPNATHILQPMDVAVFRSLKEGWKNKVHKWRLENIIKDGSHLLKKNDFAKLLQEVIDENVTESMLSNGFKKCGLYPWNPQIIEVPGQGSFKEQDESDSTELKIQYFKQGLRFLNDMIGKEKLSVFEASTETCCGDPLDTSLFKCWKKTKMELERLELDVRNNIISANLSLNDDAVESPADGNNVDETPPTDIDVIFELSGTEPCDLGNNVSANISLNNAAVEFPDDENNINEACLTDIDNNKRRRVGRERVPTIVSGKLCQQYFENKRKKREEFERLKIERANERKRKKEEIEKQKQNKLEFKKLKSKQKKILPNTDSSDSSVEFSCEESEFSEPSDHVDPDNHAWKPLLKNIDEHVIFEYDSDYYPGKIINFTEATAKISSMVKCGRLWKWPERPDVLEYQWKCVKSHIDEPKKTSKTRNVYSVPELDFPNTSVQCDDCSAVFVGALDVSLVGGSLGVVSLLSTTGFTSFDGTEAATASGAFLVAGVFVDATGAFFGAAAVADVFVDVATVSFFGAATVADALLDFATVSFFCATVADVFVDVATVSFFGAAAVADGATVERTGQNALTFQVTSKISIPFAARGLLAHGPGSRPTRPYRVGSLAGHLLALTLSRLSLTLSGLTLTSRHAALPAMH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -