Nlug002607.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- bab2
- Assembly
- GCA_014356525.1
- Location
- chr6:64410575-64446067[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00031 0.057 13.6 0.1 2 40 270 307 269 312 0.87 2 3 9.5e-11 1.8e-08 34.4 0.0 3 39 321 357 320 361 0.90 3 3 0.27 50 4.2 0.0 16 34 393 411 389 417 0.88
Sequence Information
- Coding Sequence
- ATGGCAGCCCAATCTTTCTACAGTATGAAATGGGAAAATTACTTGTATCATGTCAGTGATCTTTTTAATCAACTTCTACAAACTGGCTCTATGTCTGATATTACTCTGTATGCCGAAGGAACAAAGATAAACTGTCATAAAATACTTTTGTCAGCCTGCAGTCCATATTTCCAGGAAATTTTATCAGACGTCGGCTCAGAAAAAACAGCAATTGTAATAAGTGGTATAGAAGGCGAAGATGTGAAATCGTGCATTGAGTTTATCTACAAAGGAGAGATCAATGTAAAGGCTGATCGTTTATGCTCAGTTTTAAAAGCAGCTCAAGTTCTGAAGATTTGCGGACTCACTGATGTGAAGTGCGAAACCACCAACGACACTAGCTCATCGGTGGGAGGAGCACAGCTGACTGTAAACAACCAATCAGAGAAGGAGGGAGGAGCCAAACTAGTGTTGAAGTGCAAAACTCCAGCGGCACAACCCAAATCCAAGGAGGTCACCACCAACCCTGAGGATAAAGATAACCTTGAGGTAGCAGAGGATGGAGATAGCGAAGAAGAGACTGAAATTATTGTGCTGCCCGATCATATGATGTTGGAAGAGGCGGTGGTAGTGGGAGGGAAAAGTGGATCGGAGGGGAGAAAAGAGAAAACGAAGATAGGCAATGAGAAAAGTGAGATAGAACACAATTTGACGATTGAGGAGGATACCGATTACGAGGCCAAGGATGTGAGTTGTGATGCTCTAAAATTTCGTAAGGCGAGAAAGAAGGTTTTAAAAGGGAAGGATACAAGGAAAAGATCTTACAGTGAAGCAGCAATGCAGGCGGCCATTGAAGACATGCGGGCCGGTAAGAATCTTGTCAAGTCAGCACGAGAGCACTGTGTCCCGAAGACAACACTGTACTGTCGAGCCAGGCGGATCGGCGCCTGCCACAGGATTCACCGCAAGGGATATCCCATGGAGCAGATGAATGGTGCACTGGAAGCTGTTGCAAATGGTAGCAGCCTACAGTACGCGTCGACACAGTTCGGTATACCGAAAACAGTGCTTTGGCGAAGGGTGAAGAAGGAATTCGAGGAAAGAAATATGGCGGAAATTGAACAGTTATGCAGTGACTTGATAACGCCGACTTCTGTCAAAGTGGTCCATCCTGACGCGAATACGGCCGCCGAGGATAGTGTGTCGATAAGGAGGGTGTCGCCTCAGTATCAGATTCCAAAAGCAACATTATTTAGGTGGGAAAAAGTTGAGAAAATTAATACAGAAGACTTGGGTAGTGGTTCAAGCACGCTGAGTGCTGATGAAGAAATCAAATGTGAGCTGCTGCCTGTTGAAAATGAGCAGGGCATTGTTGAGGTGGCCTCTTCTAGTAATGAGGAACAGAGTAACACTGATGTACAAGATTGA
- Protein Sequence
- MAAQSFYSMKWENYLYHVSDLFNQLLQTGSMSDITLYAEGTKINCHKILLSACSPYFQEILSDVGSEKTAIVISGIEGEDVKSCIEFIYKGEINVKADRLCSVLKAAQVLKICGLTDVKCETTNDTSSSVGGAQLTVNNQSEKEGGAKLVLKCKTPAAQPKSKEVTTNPEDKDNLEVAEDGDSEEETEIIVLPDHMMLEEAVVVGGKSGSEGRKEKTKIGNEKSEIEHNLTIEEDTDYEAKDVSCDALKFRKARKKVLKGKDTRKRSYSEAAMQAAIEDMRAGKNLVKSAREHCVPKTTLYCRARRIGACHRIHRKGYPMEQMNGALEAVANGSSLQYASTQFGIPKTVLWRRVKKEFEERNMAEIEQLCSDLITPTSVKVVHPDANTAAEDSVSIRRVSPQYQIPKATLFRWEKVEKINTEDLGSGSSTLSADEEIKCELLPVENEQGIVEVASSSNEEQSNTDVQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01060048;
- 90% Identity
- iTF_01060048;
- 80% Identity
- iTF_01060048;