Nlug012704.1
Basic Information
- Insect
- Nilaparvata lugens
- Gene Symbol
- Kdm5
- Assembly
- GCA_014356525.1
- Location
- chrX:11217753-11258541[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-19 1.6e-15 57.7 0.1 2 84 253 331 252 336 0.88
Sequence Information
- Coding Sequence
- ATGGTAAATGTGTTCACAGGTGTTACTGCTGTTTGGAATGCAAAAGCCAAATTCAAAGTCAAAGCTCTTGAGAAGGGTGTCTCTGAAGAAGTGTCTTTCAATCATACGGAAGACAAAGAATACAACAAACCTAAAGAATACATATTGCTATTACAAACCTGGTGGCATGCTTGGTTTAGCGATTTCGAAGAGAACAGTGCCAGTTTCAAGATCCCTGATTTTGAATCTAACAAAATCGATGTCATAAATGTTTGCATCAGTGATGCAGCAGCGTTTGTGGACTTCTTCAAAGTGTTCACCGAGAAGGAAAGAAAGAAATGCGCTACCTCTATTGCATTCTGCCTGGCCTGCTGTATCAGAGCATCCAATGTGCAGGAGACTATGGACAGTTGTATGAATGAGTTCTCTGTTCCGCACCACACTCACATAGTGTTGAAGAAAGGTGACTCAAGAGCATTTTTTCCGAGAACATGCTTAGAGCGTTGTTTGAAGGCTCAGAACGAGGTTCCTGCCCCGAATTCTGATAATTCTTCCAATTTCATTAGACCACTGGAAGCACCGATATTTTATCCCACGGAAGATGAATTCTTAGATCTAACCGGCTACATTAATTCCATCAAACCTCTAGCAGAAAATTTTGGGATCTGCAAAATAATACCTCCACTGGAAACTGCTTTTCCTATTTCGCTAGGAACCTCATTCAGGATCATCACCAGCTCACAGCATCTGAACAAGATTGACGCCGTTTTAAGAAGTAGAGAGATTTTCTTGGGTAGATTGACTAAATTTTTTGAACTAAGAGGCTTAGTATTGAAGACCCCTGTTTTGGAATGCCGAAAAGTGGATTTACACTCACTTCACCACGCCGTGGCTAGACAAGGAGGGTACTGCAAAGTCTCTGAACAAAACAAATGGGTGGAGGTGGCCAAGGAATTGCATTACAAGGATATCGAGCCTATGGCCTTGGCCCTGCAAGAACATTACAAAAAATTATACTCCCATATGTGTGACCCAGGAGCTGAGCTTCATCCTCTTAATGTGAGTAGCTATGAAAAAGAGCGCATCAATTGTGTGGATTTACAGATCCAGGAAGCTTCGAATAAATTGGAAGAAATACGAGGCAACGTTACTGAATTGCCCGCTCAAGAACAGGAGAATCCTACATTAGAAACGGTCGAGCAGTTTTGGAAAATTGTTGGTGAAAAAAATACAACGGTTGACACGGTGGTCGAGTATGGAGCCGAGTATCAAAGCATTGGCTCACCCTCACACATCGCTGCTCGAATGCACATCACACGTTTGCCGGATGAAGTGCTCGGTAGATACTTAGACGGTAGATATCCGTGGTGTTTGGATAACTTCGTAGATAGCTCTGTCTCTGCACTGACCTATCAATACCTCAGCTATCAGGCATGGATGTGTGTTGGTATGATTTTCTCGACATTTGGTTGGCATAATGAGCCTCACTGGAGCTACTGTGTCGACCACTTACACTTTGGTAATTCTAAAACGTGGTACGCTGTTCCTGGCCAGTATGCTGAGAAATTCGAAGAAACTATGAAAGAGCTGGCGCCAGAGCTATTCGAAGATCAACCGGACACTCTGCTACTTCACGACTCTCTTGTCAACCCAAACGCCTTGATGGAAAAAGGTGTTCCCGTTTACAGGATGGATCAAAACGTGGGAGAATTCGTGATTACATTTCCGAGAGCCTACATTTGCAGTTTCAACCATGGCTTCAACGTGGCTGAAGCTATTAAAATCGGCCGAAAATGCGTGGAAGAATACGCTCTATTAAAAAAGTACTGTCTCTTCTCACACGATGAGTTGATGTTTAAAATTGCAAAAGATGCTGCAAATTCTGATGTACGCCTAGCTGCTGCAGTTTATCACGACCTGTACTACTCTATAAAAACAGAACTCAAACTTCGACAATTCGTCGTTGGTCAATGGGGCTGTAGTAAGGATGATCATTTTAGATTCAACTTTGAACGGATGCCGGATGACAGGCAATGCTTCCACTGTAAAACAACAATTTATTTGTCAGCTGTCACATGCAAATGTGCGATAGATGCCGGTATCCGGAGAATGGTGTGCATCAAACATTATGACAAATTGTGTACAACATGCACACCGCAAAATCACTTGCTCATAATACATATTTATTCCTATCTAAAATTGATCAATTTTGATTTGAATGAAAGATATTTTTCAAATGAGATGTACGGGCTTTTCAAAAACCTCCGAGACGTGGTGGATAATTATGAAAAATGGGTGAAGAGTATGAGACTCCTTCTTCGCAAGAGCCCAGAATTAGGTTCCTGCGAAAAAGAAGAGCTAGAGAATCTATTAGATAAAGGAGAGCAGAGCAACTACTTGAATCCGCAATTTTTGAGCATTTTCAAGTCTTGCTTACTCCTCCTACCAACAAGCAGTTTGGATGTATTTGGTAAATATAAATGCTATATTATAAGTATAAGTCAGTATAAGTGTATATTATTTGAATTATAA
- Protein Sequence
- MVNVFTGVTAVWNAKAKFKVKALEKGVSEEVSFNHTEDKEYNKPKEYILLLQTWWHAWFSDFEENSASFKIPDFESNKIDVINVCISDAAAFVDFFKVFTEKERKKCATSIAFCLACCIRASNVQETMDSCMNEFSVPHHTHIVLKKGDSRAFFPRTCLERCLKAQNEVPAPNSDNSSNFIRPLEAPIFYPTEDEFLDLTGYINSIKPLAENFGICKIIPPLETAFPISLGTSFRIITSSQHLNKIDAVLRSREIFLGRLTKFFELRGLVLKTPVLECRKVDLHSLHHAVARQGGYCKVSEQNKWVEVAKELHYKDIEPMALALQEHYKKLYSHMCDPGAELHPLNVSSYEKERINCVDLQIQEASNKLEEIRGNVTELPAQEQENPTLETVEQFWKIVGEKNTTVDTVVEYGAEYQSIGSPSHIAARMHITRLPDEVLGRYLDGRYPWCLDNFVDSSVSALTYQYLSYQAWMCVGMIFSTFGWHNEPHWSYCVDHLHFGNSKTWYAVPGQYAEKFEETMKELAPELFEDQPDTLLLHDSLVNPNALMEKGVPVYRMDQNVGEFVITFPRAYICSFNHGFNVAEAIKIGRKCVEEYALLKKYCLFSHDELMFKIAKDAANSDVRLAAAVYHDLYYSIKTELKLRQFVVGQWGCSKDDHFRFNFERMPDDRQCFHCKTTIYLSAVTCKCAIDAGIRRMVCIKHYDKLCTTCTPQNHLLIIHIYSYLKLINFDLNERYFSNEMYGLFKNLRDVVDNYEKWVKSMRLLLRKSPELGSCEKEELENLLDKGEQSNYLNPQFLSIFKSCLLLLPTSSLDVFGKYKCYIISISQYKCILFEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -