Basic Information

Gene Symbol
Kdm5
Assembly
GCA_014356525.1
Location
chrX:11217753-11258541[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.9e-19 1.6e-15 57.7 0.1 2 84 253 331 252 336 0.88

Sequence Information

Coding Sequence
ATGGTAAATGTGTTCACAGGTGTTACTGCTGTTTGGAATGCAAAAGCCAAATTCAAAGTCAAAGCTCTTGAGAAGGGTGTCTCTGAAGAAGTGTCTTTCAATCATACGGAAGACAAAGAATACAACAAACCTAAAGAATACATATTGCTATTACAAACCTGGTGGCATGCTTGGTTTAGCGATTTCGAAGAGAACAGTGCCAGTTTCAAGATCCCTGATTTTGAATCTAACAAAATCGATGTCATAAATGTTTGCATCAGTGATGCAGCAGCGTTTGTGGACTTCTTCAAAGTGTTCACCGAGAAGGAAAGAAAGAAATGCGCTACCTCTATTGCATTCTGCCTGGCCTGCTGTATCAGAGCATCCAATGTGCAGGAGACTATGGACAGTTGTATGAATGAGTTCTCTGTTCCGCACCACACTCACATAGTGTTGAAGAAAGGTGACTCAAGAGCATTTTTTCCGAGAACATGCTTAGAGCGTTGTTTGAAGGCTCAGAACGAGGTTCCTGCCCCGAATTCTGATAATTCTTCCAATTTCATTAGACCACTGGAAGCACCGATATTTTATCCCACGGAAGATGAATTCTTAGATCTAACCGGCTACATTAATTCCATCAAACCTCTAGCAGAAAATTTTGGGATCTGCAAAATAATACCTCCACTGGAAACTGCTTTTCCTATTTCGCTAGGAACCTCATTCAGGATCATCACCAGCTCACAGCATCTGAACAAGATTGACGCCGTTTTAAGAAGTAGAGAGATTTTCTTGGGTAGATTGACTAAATTTTTTGAACTAAGAGGCTTAGTATTGAAGACCCCTGTTTTGGAATGCCGAAAAGTGGATTTACACTCACTTCACCACGCCGTGGCTAGACAAGGAGGGTACTGCAAAGTCTCTGAACAAAACAAATGGGTGGAGGTGGCCAAGGAATTGCATTACAAGGATATCGAGCCTATGGCCTTGGCCCTGCAAGAACATTACAAAAAATTATACTCCCATATGTGTGACCCAGGAGCTGAGCTTCATCCTCTTAATGTGAGTAGCTATGAAAAAGAGCGCATCAATTGTGTGGATTTACAGATCCAGGAAGCTTCGAATAAATTGGAAGAAATACGAGGCAACGTTACTGAATTGCCCGCTCAAGAACAGGAGAATCCTACATTAGAAACGGTCGAGCAGTTTTGGAAAATTGTTGGTGAAAAAAATACAACGGTTGACACGGTGGTCGAGTATGGAGCCGAGTATCAAAGCATTGGCTCACCCTCACACATCGCTGCTCGAATGCACATCACACGTTTGCCGGATGAAGTGCTCGGTAGATACTTAGACGGTAGATATCCGTGGTGTTTGGATAACTTCGTAGATAGCTCTGTCTCTGCACTGACCTATCAATACCTCAGCTATCAGGCATGGATGTGTGTTGGTATGATTTTCTCGACATTTGGTTGGCATAATGAGCCTCACTGGAGCTACTGTGTCGACCACTTACACTTTGGTAATTCTAAAACGTGGTACGCTGTTCCTGGCCAGTATGCTGAGAAATTCGAAGAAACTATGAAAGAGCTGGCGCCAGAGCTATTCGAAGATCAACCGGACACTCTGCTACTTCACGACTCTCTTGTCAACCCAAACGCCTTGATGGAAAAAGGTGTTCCCGTTTACAGGATGGATCAAAACGTGGGAGAATTCGTGATTACATTTCCGAGAGCCTACATTTGCAGTTTCAACCATGGCTTCAACGTGGCTGAAGCTATTAAAATCGGCCGAAAATGCGTGGAAGAATACGCTCTATTAAAAAAGTACTGTCTCTTCTCACACGATGAGTTGATGTTTAAAATTGCAAAAGATGCTGCAAATTCTGATGTACGCCTAGCTGCTGCAGTTTATCACGACCTGTACTACTCTATAAAAACAGAACTCAAACTTCGACAATTCGTCGTTGGTCAATGGGGCTGTAGTAAGGATGATCATTTTAGATTCAACTTTGAACGGATGCCGGATGACAGGCAATGCTTCCACTGTAAAACAACAATTTATTTGTCAGCTGTCACATGCAAATGTGCGATAGATGCCGGTATCCGGAGAATGGTGTGCATCAAACATTATGACAAATTGTGTACAACATGCACACCGCAAAATCACTTGCTCATAATACATATTTATTCCTATCTAAAATTGATCAATTTTGATTTGAATGAAAGATATTTTTCAAATGAGATGTACGGGCTTTTCAAAAACCTCCGAGACGTGGTGGATAATTATGAAAAATGGGTGAAGAGTATGAGACTCCTTCTTCGCAAGAGCCCAGAATTAGGTTCCTGCGAAAAAGAAGAGCTAGAGAATCTATTAGATAAAGGAGAGCAGAGCAACTACTTGAATCCGCAATTTTTGAGCATTTTCAAGTCTTGCTTACTCCTCCTACCAACAAGCAGTTTGGATGTATTTGGTAAATATAAATGCTATATTATAAGTATAAGTCAGTATAAGTGTATATTATTTGAATTATAA
Protein Sequence
MVNVFTGVTAVWNAKAKFKVKALEKGVSEEVSFNHTEDKEYNKPKEYILLLQTWWHAWFSDFEENSASFKIPDFESNKIDVINVCISDAAAFVDFFKVFTEKERKKCATSIAFCLACCIRASNVQETMDSCMNEFSVPHHTHIVLKKGDSRAFFPRTCLERCLKAQNEVPAPNSDNSSNFIRPLEAPIFYPTEDEFLDLTGYINSIKPLAENFGICKIIPPLETAFPISLGTSFRIITSSQHLNKIDAVLRSREIFLGRLTKFFELRGLVLKTPVLECRKVDLHSLHHAVARQGGYCKVSEQNKWVEVAKELHYKDIEPMALALQEHYKKLYSHMCDPGAELHPLNVSSYEKERINCVDLQIQEASNKLEEIRGNVTELPAQEQENPTLETVEQFWKIVGEKNTTVDTVVEYGAEYQSIGSPSHIAARMHITRLPDEVLGRYLDGRYPWCLDNFVDSSVSALTYQYLSYQAWMCVGMIFSTFGWHNEPHWSYCVDHLHFGNSKTWYAVPGQYAEKFEETMKELAPELFEDQPDTLLLHDSLVNPNALMEKGVPVYRMDQNVGEFVITFPRAYICSFNHGFNVAEAIKIGRKCVEEYALLKKYCLFSHDELMFKIAKDAANSDVRLAAAVYHDLYYSIKTELKLRQFVVGQWGCSKDDHFRFNFERMPDDRQCFHCKTTIYLSAVTCKCAIDAGIRRMVCIKHYDKLCTTCTPQNHLLIIHIYSYLKLINFDLNERYFSNEMYGLFKNLRDVVDNYEKWVKSMRLLLRKSPELGSCEKEELENLLDKGEQSNYLNPQFLSIFKSCLLLLPTSSLDVFGKYKCYIISISQYKCILFEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-