Nves003781.1
Basic Information
- Insect
- Nicrophorus vespilloides
- Gene Symbol
- nfxl1
- Assembly
- GCA_001412225.1
- Location
- NW:37191-40814[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.2e+04 -5.0 1.9 15 19 158 162 158 162 0.85 2 19 0.15 8.5e+02 -0.5 0.8 4 10 193 199 192 199 0.95 3 19 1.3e-06 0.0073 15.7 18.1 1 19 207 224 207 224 0.99 4 19 1.3 7.5e+03 -3.5 0.4 6 10 250 254 249 255 0.76 5 19 9.9e-10 5.8e-06 25.6 14.0 1 19 260 278 260 278 0.98 6 19 0.69 4e+03 -2.6 1.9 6 10 303 307 302 307 0.90 7 19 2.3e-08 0.00013 21.2 10.0 1 19 313 331 313 331 0.97 8 19 2.1e-05 0.12 11.8 8.9 1 18 366 383 366 384 0.97 9 19 2 1.2e+04 -4.2 2.9 1 5 393 397 393 404 0.80 10 19 0.057 3.3e+02 0.8 15.3 1 18 418 436 418 437 0.91 11 19 3.6e-07 0.0021 17.5 12.6 1 18 446 463 440 464 0.85 12 19 0.94 5.4e+03 -3.1 0.9 5 10 492 497 492 497 0.93 13 19 0.002 12 5.4 6.8 9 19 512 522 510 522 0.90 14 19 0.0034 20 4.7 7.0 1 12 532 542 532 542 0.90 15 19 2 1.2e+04 -6.1 4.9 14 18 570 574 567 574 0.86 16 19 4e-05 0.23 10.9 7.2 1 12 611 622 611 622 0.96 17 19 1.5e-05 0.085 12.3 19.7 3 19 652 668 651 668 0.92 18 19 4.7e-05 0.27 10.7 11.5 1 16 710 724 710 730 0.90 19 19 0.95 5.5e+03 -3.1 0.9 6 10 760 764 759 764 0.89
Sequence Information
- Coding Sequence
- ATGAATTCCAAACCGAACGACAATAAAAACCCGTGGAACAAGAACACCAAATCGAAAATACCCACTGCAAAGAACAGCAAGAATCCTGAGGAAAAATTCAAGGAGGCCCAGCAGAAGCTCCAAGCAGCTGTACAGAAATTTACCAAAGACTATGAATCCTCTGAAGAGGAAGAAGAGTTGGAAGTAGATAATGTtatagGAACAATTTTGAAAGACTATGATACAAGTGGTGCTGGAAAGGAATTGTTAAGAACCCGAGGATTCTTAGAGGAAGCATTTCAATCTGGAGCTTGCACCTGCCTAATATGTATTTCATCTATTAAAAGAACTGATGCAATATGGAGTTGTGAAAAATGCTATTGTTTCTTCCATTTGATGTGTATACAGAGATGGTCGAAGGATACCATTTTCCAACAGAAACAGGCACTGGAAGCGCCAGTCCAAGTGCGtcgcattaaattaaaatgggGTTGTCCTAAGTGCAGACACGAGTACGAGCCGGAACAAATTCCAAACGAGTATCGGTGTTTCTGCAAAAAGATCACAAATCCTAAGTTCCAATCACTGATAGTGCCCCATTCTTGCGGAGAAACATGTCGCAAGGATTTGCAGCCGTATTGCGGCCACGGCTGCTTATTGCTATGCCATCCCGGACCATGTCCACCCTGCCCGGTGATGGTTAAAGTCACCTGCTTCTGCGGACACTCCGAACCGAAAATCCAAAGATGCAGCAACAAAGAATGGAGCTGCTCGGCACCTTGCAACAAACTCTTGAGCTGCGGCAAGCACAAATGCTCTCAACCTTGCCATGCGGGTGATTGCTTACCCTGCTCCAAGAAAAGCGTGCAGAAATGCGTCTGCGGAAGTACTCAGAAACTCAGGGATTGCTCCACGCCAGTCTGGCAGTGCGAAAAgGTGTGTAGGAAAGATTTGAAGTGCGGTTTCCACAAATGCGACGAGATATGTCACACGGGCGTTTGTGGTTCCTGTAAACTTTCCGAAATTAGAACTTGCCCTTGTGGTAAGTCCAATTACCAGCTACCTTGTACCGAGGATACTCCGACCTGCGGCGACACTTGCGGTAAAGTTCTGGAGTGCGGTATGCACATTTGTAATAGAAGGTGTCATAAAGATAAATGCAGTCagTGCCTTGAAACAGTTACTAAATCATGTAGATGTGGTTTGCATAAAAAACAGATCCAATGCTGTAAGCCTTATGTATGTGAGACGAAATGCAAGCAGATGAGAGACTGCAACAAACATCCATGTAATAAAAAGTGCTGCGATGGTAAAGATTGTCCATCGTGCGAGAAACCTTGTGGAAAAACTTTGACGTGTCGAAAACACGCGTGTGCTTCGGTTTGCCATCGAGGTCCTTGCTATCCATGTAACTTAACAGAAACTCTGAAATGCTTCTGTGGAGCCACATCGATTGTAGTACCATGCGGTAAGAAGAAATCCACGAAGCCACCAAAATGTTCGAAGATATGTAAGAAATCTACAGAATGTCATCACAAGAAGAGCGTGCCGCATAAGTGCCATTTCGGCGACTGCCCACAATGCAAGCAAATATGCGACAAACCAAGAGATACTTGCTCCCACAAGTGTCCGTCCACTTGTCACTCCTCGGTTTTGATGAAATTCGAAGCTCCAAGAGCGTCAACCCCTTGGGAGCAGGAAGCTCCAACTATAACTAAATGTGCGTTACCATGTCCCAATTGTATCGTCCCAGTTCCTGTTACGTGTTTGGGCGGCCACGAAACCGCGGATTATGCGTGTTACTTAGCAATACCTTCGAGTTGCTACAAACCTTGCAAAAGAGAGTTACCATGTGGAAACCACACTTGCTCAAAAGATTGTCATACAGTTGAAGAAGCCCCAAATAGTTTAAAGGCTGGTAAGAATTGCGAAGAATGCAACAGTGGCTGTACCAAGCCAAGACCAGAAGGTTGCACTCACCAGTGCCCCAAACCTTGCCACCCAGGCTCATGTCCACCATGTCAGTTGATGGTCAGGATCAAATGTCATTGTAACTTGAGCCAACCGTACGTTTCCTGTAAAGACTGGACAACGGGAGATCGTGATGCTCTGCAGAGTTGCGGAAATCGATGCCCTAGCAAGtatCCGTGCGGACATCAATGCAGAGCAAACTGTCACCAAGGCGATTGTCCGAACGCCGAAgattgtaaaaagaaaatgaaaatatcctGTCCGTGCAAAAGGATCAAAAAGGATATCACCTGCGACGTTCAGAGAAAGACCGGAGGTGTCTTGGAATGCGACGAAGTTTGCGCCGAGAAAAAGCTGGAGGAGAGAAAGCTGAAAGATTTGGAGAACGAGAAGCGGAAGAAAGAGGAGGAGATAAAGAACCAAAAGGAGTTGGAGAAGTACGAGAAAATGATGCAAGGCAAGAAGAAATCCAAAGAGCGAAAAAACGTCGAAATCGTCGAGCAGAAAAGTTTCATGCAAAAGTATTGGATGTTTATTGTCGGTTTTGTTGTTGTGGCGATCGGTATTTATCTCAGTCTTTCGTGA
- Protein Sequence
- MNSKPNDNKNPWNKNTKSKIPTAKNSKNPEEKFKEAQQKLQAAVQKFTKDYESSEEEEELEVDNVIGTILKDYDTSGAGKELLRTRGFLEEAFQSGACTCLICISSIKRTDAIWSCEKCYCFFHLMCIQRWSKDTIFQQKQALEAPVQVRRIKLKWGCPKCRHEYEPEQIPNEYRCFCKKITNPKFQSLIVPHSCGETCRKDLQPYCGHGCLLLCHPGPCPPCPVMVKVTCFCGHSEPKIQRCSNKEWSCSAPCNKLLSCGKHKCSQPCHAGDCLPCSKKSVQKCVCGSTQKLRDCSTPVWQCEKVCRKDLKCGFHKCDEICHTGVCGSCKLSEIRTCPCGKSNYQLPCTEDTPTCGDTCGKVLECGMHICNRRCHKDKCSQCLETVTKSCRCGLHKKQIQCCKPYVCETKCKQMRDCNKHPCNKKCCDGKDCPSCEKPCGKTLTCRKHACASVCHRGPCYPCNLTETLKCFCGATSIVVPCGKKKSTKPPKCSKICKKSTECHHKKSVPHKCHFGDCPQCKQICDKPRDTCSHKCPSTCHSSVLMKFEAPRASTPWEQEAPTITKCALPCPNCIVPVPVTCLGGHETADYACYLAIPSSCYKPCKRELPCGNHTCSKDCHTVEEAPNSLKAGKNCEECNSGCTKPRPEGCTHQCPKPCHPGSCPPCQLMVRIKCHCNLSQPYVSCKDWTTGDRDALQSCGNRCPSKYPCGHQCRANCHQGDCPNAEDCKKKMKISCPCKRIKKDITCDVQRKTGGVLECDEVCAEKKLEERKLKDLENEKRKKEEEIKNQKELEKYEKMMQGKKKSKERKNVEIVEQKSFMQKYWMFIVGFVVVAIGIYLSLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058798;
- 90% Identity
- iTF_01058798;
- 80% Identity
- -