Basic Information

Insect: Nicrophorus vespilloides
Gene Symbol: HINFP
Assembly: GCA_001412225.1
Location: NW:41351-43841[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.061 4.2 7.4 0.6 2 23 82 105 81 105 0.91

2 8 0.00083 0.056 13.3 0.8 3 23 219 241 217 241 0.91

3 8 0.00064 0.044 13.7 1.1 3 21 249 267 248 268 0.94

4 8 0.0019 0.13 12.2 3.4 1 23 277 299 277 299 0.98

5 8 2.7e-05 0.0019 18.0 1.8 1 23 303 326 303 326 0.96

6 8 0.0016 0.11 12.4 1.4 1 23 332 354 332 354 0.98

7 8 0.0026 0.18 11.7 1.7 3 23 362 383 360 383 0.95

8 8 0.00069 0.047 13.6 2.4 1 23 391 414 391 414 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.061	4.2	7.4	0.6	2	23	82	105	81	105	0.91
2	8	0.00083	0.056	13.3	0.8	3	23	219	241	217	241	0.91
3	8	0.00064	0.044	13.7	1.1	3	21	249	267	248	268	0.94
4	8	0.0019	0.13	12.2	3.4	1	23	277	299	277	299	0.98
5	8	2.7e-05	0.0019	18.0	1.8	1	23	303	326	303	326	0.96
6	8	0.0016	0.11	12.4	1.4	1	23	332	354	332	354	0.98
7	8	0.0026	0.18	11.7	1.7	3	23	362	383	360	383	0.95
8	8	0.00069	0.047	13.6	2.4	1	23	391	414	391	414	0.96

Sequence Information

Coding Sequence: ATGATGGCAAGTAAACGTGACATCAAAACGGTTCTCGAGGAAATCAAGCACCGTGAGCGTATGAACAAGAGGAGCAAGGAGTCGTTTGATAAAAACTTATTGACTCCGGACACGGATTGCGGTTTGGTGATCGACGAGGAATACGATGATAACATAGCTGTAAGCTACACTTTATCCAGAAgcacgaagaagaaaaagaaagagttGCAGAACATTAAGTTCATTGATGAACCAGTGGATCTAACCTGTGAATGGTTGTCTTGTAAAGAGAATTTTAAGTCTGAGAAGAAATTCACTGAACATTTGCTAGAACATTCATTGGAGGCTGAAATAGATGAGGAAAAAGGTTTATATCTATGTTGCTTTGGCGATTGCCAAtgtgaaaataacaatttgcaaTCTCTTGTTAAGCATGTTTCTTTTCATGCGTATCATGAGAGGCTCAAAAACATTGGGAAGAATGTTGCAGATAGATGTAATTTCACCAAGTGCACTTCTGATAAGATGTATGAAGTGCCAGCAATATATGCAGATTACATGTGCGAGTGGCACAGTTGCAATACATTGCATGGGACTGTTAATGAATACTTGTTGCATATTAAATTGCACTTAAATGAACTCCCGAAAGTGAGTGCAAAGGGGAGTTACTTGTATTGTGGTTTTAAAGgCTGCAAGGCTAAATTCAGTAGCCAGAGTAAATTGTCTGATCATGTTCGATCCCATACCAAAGAGAAAGTCGTTGCATGTCACTATTGTGGAAACATGTTTGCttcgaaaacaaaattgaatgatCACACTAAAAGGCAGATACCTGCAGAGaTGCTAACATATCAATGTTCAACctgttgtaaattattttctactgAGAGATTGTTGAGAGATCATATGAGAGGTCacataaacaattacaaatgcAGCATGTGTGATATGACTTGTTCGAAGCCTTCAATGTTAGCCATCCATATACGATTTAGGCATGTGAACGAACGTCCCTTTAAATGCCATCTGTGTGCTTTTGCGACTGTAACGAAAATGAACCTCGAGGATCATTTGACCACGCATTGTCCGGACAAGTTGATGGCTTGTGAAGAGTGCGATTTCAGTTGTCGATCTTTTTACGGCTTGGAGAAGCATTACATAAAAAAGCACGGAActGGTGATTTGTCGCAGTATGAATGTCACTTGTGCCAGAAGACCTTTTCTAGGGGAGGAATCTTAACGAAGCACTTGACCAGGACGCACGATTATACTTGGCCGGCCGGACATTCTAGATTCAAGTATCGAGAAGAAGCCGATGGGAAGTTCCGATTGCAAACTGTGCGTTACGAGAGTTTGGAAGCCACGCAAGACATGATGGCAAAGAAACAACCtctaattaatgataatatcaAATACGATTTGGAAAAAGTTGTGAATAAAGACGATGGGGATGATACGCCGAAATACGTTTTAACTGTTTCGACAAAGAAAGCTGCACCGTTGAATACAGATGCTAACATTGATGAACCTGAGGATGTGAGCAACGATGAGATTGAATCgaacattataattacaatagacGATGTGGACTTCAAAGGCAACGTCATTAAATCCGAGACTATAGAACAATCGAAAGAGATTAGCAAAAGCAAAACGTGA
Protein Sequence: MMASKRDIKTVLEEIKHRERMNKRSKESFDKNLLTPDTDCGLVIDEEYDDNIAVSYTLSRSTKKKKKELQNIKFIDEPVDLTCEWLSCKENFKSEKKFTEHLLEHSLEAEIDEEKGLYLCCFGDCQCENNNLQSLVKHVSFHAYHERLKNIGKNVADRCNFTKCTSDKMYEVPAIYADYMCEWHSCNTLHGTVNEYLLHIKLHLNELPKVSAKGSYLYCGFKGCKAKFSSQSKLSDHVRSHTKEKVVACHYCGNMFASKTKLNDHTKRQIPAEMLTYQCSTCCKLFSTERLLRDHMRGHINNYKCSMCDMTCSKPSMLAIHIRFRHVNERPFKCHLCAFATVTKMNLEDHLTTHCPDKLMACEECDFSCRSFYGLEKHYIKKHGTGDLSQYECHLCQKTFSRGGILTKHLTRTHDYTWPAGHSRFKYREEADGKFRLQTVRYESLEATQDMMAKKQPLINDNIKYDLEKVVNKDDGDDTPKYVLTVSTKKAAPLNTDANIDEPEDVSNDEIESNIIITIDDVDFKGNVIKSETIEQSKEISKSKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01058702;
90% Identity: -
80% Identity: -