Nves003961.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nicrophorus vespilloides
Gene Symbol
-
Assembly
GCA_001412225.1
Location
NW:11600-23121[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.00011 0.0074 16.1 0.5 2 23 239 260 239 260 0.97
2 36 0.069 4.7 7.3 0.4 1 23 266 289 266 289 0.94
3 36 8.4e-05 0.0057 16.4 2.7 1 23 294 316 294 317 0.95
4 36 2.8e-06 0.00019 21.1 4.6 1 23 326 348 326 348 0.99
5 36 8.2e-06 0.00056 19.6 0.1 1 23 354 376 354 376 0.98
6 36 0.00066 0.045 13.6 3.2 1 23 382 404 382 404 0.97
7 36 0.00027 0.019 14.8 3.6 1 23 410 433 410 433 0.98
8 36 6.5e-07 4.4e-05 23.1 1.7 1 23 439 461 439 461 0.98
9 36 0.3 21 5.2 0.2 1 19 502 520 502 523 0.84
10 36 8.5 5.8e+02 0.7 1.3 5 21 581 597 580 598 0.90
11 36 0.0061 0.41 10.6 1.7 2 21 637 656 636 660 0.90
12 36 0.54 37 4.5 0.4 2 21 663 682 662 683 0.92
13 36 1.2 82 3.4 0.7 2 21 754 773 753 774 0.93
14 36 0.028 1.9 8.5 0.8 1 23 860 882 860 882 0.97
15 36 0.91 62 3.7 2.1 1 22 1207 1228 1207 1228 0.95
16 36 0.71 48 4.1 0.9 2 23 1257 1279 1257 1279 0.96
17 36 1.4 96 3.2 0.3 3 12 1281 1290 1281 1293 0.88
18 36 1.9 1.3e+02 2.8 1.3 2 22 1326 1346 1325 1348 0.87
19 36 5.5e-05 0.0037 17.0 2.6 1 23 1506 1528 1506 1528 0.98
20 36 1.3e-05 0.0009 19.0 6.8 1 23 1533 1555 1533 1555 0.99
21 36 7.5e-05 0.0051 16.6 2.2 3 23 1563 1583 1562 1584 0.95
22 36 0.0055 0.38 10.7 2.0 1 23 1589 1611 1589 1611 0.96
23 36 3.4e-05 0.0023 17.7 1.6 1 23 1621 1643 1621 1643 0.98
24 36 0.0002 0.014 15.2 0.3 1 23 1649 1671 1649 1671 0.98
25 36 0.00017 0.011 15.5 0.6 1 23 1677 1699 1677 1699 0.98
26 36 8.5e-05 0.0058 16.4 3.2 1 21 1705 1725 1705 1727 0.96
27 36 0.0016 0.11 12.5 6.7 5 23 1736 1754 1725 1754 0.89
28 36 2.9 2e+02 2.2 2.2 2 23 1856 1877 1855 1877 0.87
29 36 0.0012 0.081 12.8 3.9 1 23 1883 1905 1883 1905 0.98
30 36 0.0077 0.52 10.3 1.7 1 23 1911 1933 1911 1933 0.94
31 36 0.00029 0.02 14.8 3.4 1 23 1939 1962 1939 1962 0.98
32 36 0.00029 0.02 14.7 2.5 1 23 1974 1997 1974 1997 0.95
33 36 0.0027 0.18 11.7 1.0 3 23 2008 2028 2007 2028 0.98
34 36 1.8e-06 0.00012 21.7 1.9 1 23 2034 2056 2034 2056 0.98
35 36 4.3e-06 0.00029 20.5 0.9 1 23 2062 2084 2062 2084 0.98
36 36 0.022 1.5 8.8 0.1 1 21 2090 2110 2090 2111 0.94

Sequence Information

Coding Sequence
ATGGCTAGCACAGTGGAATTGATGCATTTGTGTAGGCTGTGCTTAGTCAAAGAACAAGTAAATGTGCCCATATTCGAGGATCAGGACGAGGATAGCcagattttcatgaaaatcgtTACTTGTCTGCCGGTCAAGATAAATAAAGATGATAAATTACCCAAGAAAATATGTGGTGGCTGCTCTTACAAGCTGGACCTGTTCTACCAATTCTGCAATTCTACAACAAATGCAGAGAAACAGTTACTGCAATGGTTTAACAAAGTTGGATTTGATGATGCAGATAATGTTGACAGCCAACCAGAGGCATCAAAAGACATAGTTGATGAAGCACAGGCAGATTCAATTTCAACAGAAACGCAGAGTTACAtattgcagcagcagcagctacCATATGGACCAGTGGAGTTCTTCCAGGATGACTTTGATGATTCTCAACCTGCTTCTGGTGCTAGTGAAAGTGAATTAGTTGAGGAATCTGCAGTGAAAAAACGTAAACGTGCCACAAAGAATGTATCTAATAAAAAGAGTAAAACTGTGGTCACAACTAAGACTGATGCcagtgatgatgatgatgatgatgaagacgaTGATGATGTTAATGACCCTAATGTGATGACATTTGAAGATTCCAAATTCTCAATTTCATGTGACCGTGATGTTGAAGAAGCTGGTCCCTCAGGAATTGGAAAACCTGACACACCTTGTGGTGAGAATGTGTGCGATGTTTGTGCGAAAGTGTTTTCTGTTCCGTGTATGTTAAGGATCCACATGCGGAGGCATTTTAAAGAGTACACGTATAACTGTGACAAATGCGATTTCGGAACGTTTCGGAGGGACGTACTGAGGAGGCACGAAGAGGTCGTGCATAACGGGATGAGGTTCATATGCAAGGTGTGCGGAAAGAAATTCACGAGCAAGTACTCGCAGATCGCGCACGAGAAGATGCATCATCGCCAAATCCTCGACTGCGAGAAGTTCAAATGCGAGATCTGTAACAAGGTGTTTGTCCACAAGAAGACGCTGGTTCATCACATGAAGATACACAGCGGGAATAACAAGTTCGTGTGCGATGTTTGCGGTAAAACCGTGGCCTCTGCGGATAGCCTGAAGCATCACCTGATGGTGCATTCAGGTTCAAAACCATACACTTGTCCGGTGTGCGGCAAACGATTCAACAAGAAACAACTTTGCACCATCCACGAGAGGACCCACGGAAAGTCGAAGCCGTACAGTTGCACTATATGCCACAGCAATTTTACCCAAAGATCGTCCCTCGTGGTTCACACTCGCCGTTTCCACACCTCCATCAGACCGTTTACCTGTAACGTTTGTAACAAAAGCTTTGCAACGAAATCTGCCTTAACAGTGCACAAGAAAAGACATATAGTAACttGTGATATCGAGAACATCGACAGTAAGAAGTATTCGTTAGTGAAAACGAAGAGGAAAAAACAACAGGTCTCCTTGAaccatgtaaatattatagataaCCCGAGAACGAAGTACAAATGTGCCGATTGCAACGAACGATTTCAAGACTACCAAATTCTGCAGTCACACAAGGAAGTAtgtcttaataaaaatgatgacgaagaagaggaagaagacaAGGATGATCATAAAGCCTCTCCCACAAACACCATCACGTCTTCAGAAGCCGCTACGACTGTCGTCACCAGCCCGACAGATGAATCTAATAACCAGGATGCTGATTTCGACCAGAACAAGTCGTACTTGTGCAAGTGCGGCAAGAATTTCTACAAAACATGCATGTACATTGCGCACACGAAGTTATGCAGGGTATACGCAATGGCAAAGAATACGGATCATTTCCAATGCAAGAACTGCCACAGGTTCATTTACAGTCTACAGTTTCATAATCACACATGCGCCCCGGCGCCCAAATGGAACTGTCACGACTGTGACGAGAATTTCAAATCGTTTAACGAACTGGTTCAGCACTACAAGGACTATAAGCATTCGATGACCTGCGGCACGTGTCTAAAGGAATGCACCAGTTACGGCAGTTTGGCGGCTCATAAGATGTCTTGCAATCCGAAATTTGCTGCAAAGATTACAAAGGCTGTAACGtctacgacgacgacgacgacaacaacaacaaataccACTGGCGCCACTTTGTCTACAACTCAATCGTCCTGCAAAACAGTCAAAGTGCAGCAGGCTACACAAATACCTGCTGAAACTAAAACCACCacttcaaacaaaacaaaaatcaattccACCGGAAAAACCAAGACCTGTAAAATTTGCAACGTGATATTACCTTCggatgaaaaattaaagaagcATACGTGCGTCGCACCGTCTACTGCGGCGACTACTACCACAACTAAATGCGATCTCTGTTCGGTCCGGCTGCCTCCGGAAGCTCTCATTAGTCACATCGAAAGTCATTTTTCCATTGTTCAAGTAAAGAACGTAACTGGCTCAACGTCTACGGAAATGAAAGCTCAGGAATCGCCTGCGGAGCCAAAGGCAtcggataataataatgtagaaTTGATGTTATCGGAATTGAATAAGATTATATCGGACACAAAGAACCTAAAGTGCTTTAAGTGTacgatttgtaataaaattgaaacgacGGAGAAGAAGTTACAAGAACATTTGGAACAGCATATAACTGTTCACCAAAAGCCCAACCACGATCATTCTGCGCATCCACCGACGACCACTACGAAGGTAGTGAAACCCTCGGAAATTCTACCAAAAACCGTAGATGTAACGACAAAGAACAGCACAAATCAGATACCACTGCAAAGGATGATCCCACTGATGAACAACCAAAATCCACCGAAATTATTCTTGATAATGACGCCTACGGGTGGGACGTCCAGTGTGACCCCTGTATACACAACCATGACGAATCTTAATCTGATGACGCAGAGCTTGAGCACCTTTGCCATACAACCTCAACTTAATTTAAACACCACTCATACAACCGCTCAGATGCCTATAAGAATGCAGATAACGCCATCCAGCGTCAAACAGCCGATCGCCAATAGTATTAGCAATTTTGTGATAAGCGATGTCACGTCTGGACCTGCTGCACAGTCTATGATAGAACAGCAATCGCCGGCAATTGCAGTTCCACCCGTCGAAGGTGCAGTTTCATCAGGTGCTCCCGCTATTGGAGATTCTATTGATGCTGCTGCAGTATCGAATAATATTGATGACGATACCGCTActaaaaatgttgatgaaaCGATCGATGATGGATCGACTGAAAATGCTATTGATGTATCTAGTAATCCAAACTATAAGCCAAAGATATTTGTAAAGCCCCTAAGTCAGTTGCTGAAAAGCCCGGTTAAAACGCTTGTAAATGAAGCTTTAAGCAGTGAGAGCCAAAAGCAAAATGTTGATGGCAGTCAGGTGAAGAAAATAATCGATACAGATACAGGCACGGTGATCAAGAAAAATGTTGCTGAAGCCGAGAAAACTGTAACGAACGTGGTGTTAGCCGAACCTGGCAAGCTAGAAGCAATAGGCAGTGCTTCTAGtgttaaaactattatagaaGTTGTTAGTCCGAGCACGAGTATGCTGCCGAATATAAGTCTAGTGAAAACCAAGGGCGTGAAGAAGTTCTTTAAGTGCTCCATGTGCAACATTCTTCAGAGAAAGTCTTACCAGCTGAAACAACATCAGAAGAAGTACAACTGCAGGGTGTGCCCTtactattgctgcaagcaggCCATGATGGATAAGCATTACATAGACGTGCACAATTACAAGAATCGATGCGCGCTTTGTGACATGCAATTCGATACTATAAAAGACCAGAAGTTACACAAGAGGAAAGTGCATTGGTGTTCTCTGTGCGGTCGATGTTTTGCGGATTTGGAGCTGCACGAAAAGGCTTACACCTGTAAATCCTGCCAGTTTACAGCATGCAACAACGTCATCCTGGATAAACATTACAAGAAGATGCATTGCGTGACGATGCGCTGTACACCCTGCAACGAGGTCTTCTACTCTCACACCACCTTTACCGATCACAAGGACGCAAtacattattgtaaaaaatgcaAAACCTACAAGATGGATCTGAACATCCACCAGACGTTCTGCAAGGGCGTCCCAATAAGACCCTCGCCGCCTGTACTCAACACCCCTCAAGTGATTCTAAATAGCCCTACGATTGCAGTCAAaaatttccaAGAAGCCATGTATAGCCAATCGAACTTTGGCTTGGAAAGCTGCGACTTGCAGGTCaggcaacagcagcagcagtacaTGCTGTGCGTGAAGCAGGAGGGAGAGTACAATCTGCTGGACAGCGCCGTCGACCAACTGAGCGATCCGGACCTGCTGAACCTCTTGGCCACCGAAGACTGTACGTCCATCCTGCAGAACATCGAAAGCAATGAGAACTTCGAGAGACTCATTAGTAACGATGTGGACGATGGAAATTTGAACTTCCTGGATGCGAACTACTGCGAAAATATCTTGAAGGAGGAATGCTATTTCTCGGAAGTTAGGCCGTACGCTTGCGAGGTCTGTAACAAGAGGTTCAAGCAGAGGCACGAGGTGAACGCGCACAAGCGCAGCCATAGCAATCCGTCTTTCCAGTGCGATATCTGTTCGAAGATGTTCGTGCACAAATCGCATCTCACCAGCCACAGAAAGAAACACTTGTGCGAGTTCTCAGAGTTCTGCAAGGATTGCAACAAGGGTTTCGTTACGAAATCGGCATACTTGAAGCACGTGAAGGTGCATCACGAGAAGGTGTCGCACATTTGCGACATCTGCGGACATCGTCTGAGCACGATGAGCGCCCTTAACGAGCACAAGACTACGCACGATCCCAATTATGGAAAGGAGAGGTCGCACGTTTGCGACATATGCGGAAAAAGCTACTTGACCGCGCGCAATCTCAAGACTCACCTGAAAACGCATCTTCAGCTCAGCTCGTACGTCTGCAACATTTGCGGCAAATCATTGAGCAGCAAGAAAATTCTCGAGACGCACGTGAAAATGCACATCGGCGAGAAAGATTTTGTCTGCGAATTTTGCACTAAAAGCTTTGCGGCGAAGGAGTATCTGGTGAGTCACAGAAGGATCCACACCGGTGATAAACCTTTCAAATGCCATCTCTGCGAGAAAGCGTTTACTCAAAGAACAACCCTCACTGTGCATCTGCGATGTCACACAGGTGAAAGACCCTACAAATGCCATTGCGGAAAGGCTTTCATCACGAAGAACCATCTGACTAACCATTACAAAACACACGATCTGCCCAATTTGGATTTCTCATACGAATTTGCGgagcaaaaaataataactcaaGAATTgtACAGTGATGAAGCGAAGTCGGTTTTAGTGAGTGTTGTTGCTTTGGAAGAGAAGGCtgaaaaagaaacgaagaagTTGAGTAGTAGTGATGTTGGGAAGAAAGTAACGGCGAAGAGCAGGAAGACGAGGGAAACACCGAGGACTAAGAGGAAGACGAGAAGCGTGAAGAAAGATGAGGATTTCGAGTACGTTCCTGGTGACGGTGACAGCAGCAGCAAGACGGAAGAGGATGAGCCCATCCATTGTGATACGTGTGACACTATCTTTAAAAATCATCTCACCTTTGGGCTTCACTCGCTCATCCACAACGCCGATGACAAATATTCGTGTCACATGTGCAATTACAAGAGTTCCTCGAAGTACAACTTCGAGATGCACATCAAAGCGCACCAGGGGAAGACAGGCTACAAGTGCGAGATTTGCAACAAGGCGTTCACCATAAGCACGCACGCCGTCGAACACAAGAACTTCCATACCGGCGAGAAACCGTTCCAGTGCGAAATATGCGGTAAGCACTTCATGTTCTCGTGGTTCCTGACATCGCACAGACGATCCCAGCACTGGGAAATAATGACCGGGAAGCCACTGGTCAAGTACGATTGCACCATCTGCAACAAGCACTATACCAGTGCCACCGGTCTACGCAGACACAAGATCAGCAAGCACAATTACCAGGGAATAGATGCGAGCGTTCTGTGCGACATCTGCGGCAAGAGTTTATCTAGCAAGGAGAAGCTCAAGTTCCATAGGCGCATCCACACCGGGTACAAACCGTACTCGTGTCAGATGTGTTCGAAGAGCTTTACCAGGAAGGAGCAGCTCAAGGAACACGAGAGAGTGCATACAGGCGAGAAACCGTTCATCTGCAAGTTCTGCGGAAAGGGTTTCACCCAGCGGAGTCCTCTGAGGATTCACGAGAGGACTCACACGGGCGAGAGGCCGTACATCTGCAGACTTTGCGGCAAGGGATTCATCTCGAAGGGTGTCATGGACACGCACATGAAGAACTGCGAGGGTGGTCAACATTCGACATTCATgcagtga
Protein Sequence
MASTVELMHLCRLCLVKEQVNVPIFEDQDEDSQIFMKIVTCLPVKINKDDKLPKKICGGCSYKLDLFYQFCNSTTNAEKQLLQWFNKVGFDDADNVDSQPEASKDIVDEAQADSISTETQSYILQQQQLPYGPVEFFQDDFDDSQPASGASESELVEESAVKKRKRATKNVSNKKSKTVVTTKTDASDDDDDDEDDDDVNDPNVMTFEDSKFSISCDRDVEEAGPSGIGKPDTPCGENVCDVCAKVFSVPCMLRIHMRRHFKEYTYNCDKCDFGTFRRDVLRRHEEVVHNGMRFICKVCGKKFTSKYSQIAHEKMHHRQILDCEKFKCEICNKVFVHKKTLVHHMKIHSGNNKFVCDVCGKTVASADSLKHHLMVHSGSKPYTCPVCGKRFNKKQLCTIHERTHGKSKPYSCTICHSNFTQRSSLVVHTRRFHTSIRPFTCNVCNKSFATKSALTVHKKRHIVTCDIENIDSKKYSLVKTKRKKQQVSLNHVNIIDNPRTKYKCADCNERFQDYQILQSHKEVCLNKNDDEEEEEDKDDHKASPTNTITSSEAATTVVTSPTDESNNQDADFDQNKSYLCKCGKNFYKTCMYIAHTKLCRVYAMAKNTDHFQCKNCHRFIYSLQFHNHTCAPAPKWNCHDCDENFKSFNELVQHYKDYKHSMTCGTCLKECTSYGSLAAHKMSCNPKFAAKITKAVTSTTTTTTTTTNTTGATLSTTQSSCKTVKVQQATQIPAETKTTTSNKTKINSTGKTKTCKICNVILPSDEKLKKHTCVAPSTAATTTTTKCDLCSVRLPPEALISHIESHFSIVQVKNVTGSTSTEMKAQESPAEPKASDNNNVELMLSELNKIISDTKNLKCFKCTICNKIETTEKKLQEHLEQHITVHQKPNHDHSAHPPTTTTKVVKPSEILPKTVDVTTKNSTNQIPLQRMIPLMNNQNPPKLFLIMTPTGGTSSVTPVYTTMTNLNLMTQSLSTFAIQPQLNLNTTHTTAQMPIRMQITPSSVKQPIANSISNFVISDVTSGPAAQSMIEQQSPAIAVPPVEGAVSSGAPAIGDSIDAAAVSNNIDDDTATKNVDETIDDGSTENAIDVSSNPNYKPKIFVKPLSQLLKSPVKTLVNEALSSESQKQNVDGSQVKKIIDTDTGTVIKKNVAEAEKTVTNVVLAEPGKLEAIGSASSVKTIIEVVSPSTSMLPNISLVKTKGVKKFFKCSMCNILQRKSYQLKQHQKKYNCRVCPYYCCKQAMMDKHYIDVHNYKNRCALCDMQFDTIKDQKLHKRKVHWCSLCGRCFADLELHEKAYTCKSCQFTACNNVILDKHYKKMHCVTMRCTPCNEVFYSHTTFTDHKDAIHYCKKCKTYKMDLNIHQTFCKGVPIRPSPPVLNTPQVILNSPTIAVKNFQEAMYSQSNFGLESCDLQVRQQQQQYMLCVKQEGEYNLLDSAVDQLSDPDLLNLLATEDCTSILQNIESNENFERLISNDVDDGNLNFLDANYCENILKEECYFSEVRPYACEVCNKRFKQRHEVNAHKRSHSNPSFQCDICSKMFVHKSHLTSHRKKHLCEFSEFCKDCNKGFVTKSAYLKHVKVHHEKVSHICDICGHRLSTMSALNEHKTTHDPNYGKERSHVCDICGKSYLTARNLKTHLKTHLQLSSYVCNICGKSLSSKKILETHVKMHIGEKDFVCEFCTKSFAAKEYLVSHRRIHTGDKPFKCHLCEKAFTQRTTLTVHLRCHTGERPYKCHCGKAFITKNHLTNHYKTHDLPNLDFSYEFAEQKIITQELYSDEAKSVLVSVVALEEKAEKETKKLSSSDVGKKVTAKSRKTRETPRTKRKTRSVKKDEDFEYVPGDGDSSSKTEEDEPIHCDTCDTIFKNHLTFGLHSLIHNADDKYSCHMCNYKSSSKYNFEMHIKAHQGKTGYKCEICNKAFTISTHAVEHKNFHTGEKPFQCEICGKHFMFSWFLTSHRRSQHWEIMTGKPLVKYDCTICNKHYTSATGLRRHKISKHNYQGIDASVLCDICGKSLSSKEKLKFHRRIHTGYKPYSCQMCSKSFTRKEQLKEHERVHTGEKPFICKFCGKGFTQRSPLRIHERTHTGERPYICRLCGKGFISKGVMDTHMKNCEGGQHSTFMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-