Basic Information

Insect: Nicrophorus vespilloides
Gene Symbol: su(Hw)
Assembly: GCA_001412225.1
Location: NW:282719-285748[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.013 25 4.4 0.1 13 43 185 212 180 213 0.84

2 10 7.3e-05 0.14 11.6 0.4 14 44 242 270 235 270 0.88

3 10 0.079 1.5e+02 1.9 0.2 16 29 303 316 289 326 0.71

4 10 0.00014 0.27 10.7 0.3 17 40 336 356 331 359 0.89

5 10 0.00093 1.8 8.1 1.3 6 29 358 380 356 391 0.80

6 10 0.047 90 2.6 2.0 14 41 421 445 410 447 0.81

7 10 0.063 1.2e+02 2.2 0.7 18 26 453 461 447 471 0.86

8 10 0.002 3.9 7.0 1.8 13 39 476 499 465 504 0.75

9 10 0.077 1.5e+02 1.9 1.6 17 29 539 551 528 561 0.79

10 10 0.00022 0.43 10.0 4.4 12 44 562 591 552 591 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.013	25	4.4	0.1	13	43	185	212	180	213	0.84
2	10	7.3e-05	0.14	11.6	0.4	14	44	242	270	235	270	0.88
3	10	0.079	1.5e+02	1.9	0.2	16	29	303	316	289	326	0.71
4	10	0.00014	0.27	10.7	0.3	17	40	336	356	331	359	0.89
5	10	0.00093	1.8	8.1	1.3	6	29	358	380	356	391	0.80
6	10	0.047	90	2.6	2.0	14	41	421	445	410	447	0.81
7	10	0.063	1.2e+02	2.2	0.7	18	26	453	461	447	471	0.86
8	10	0.002	3.9	7.0	1.8	13	39	476	499	465	504	0.75
9	10	0.077	1.5e+02	1.9	1.6	17	29	539	551	528	561	0.79
10	10	0.00022	0.43	10.0	4.4	12	44	562	591	552	591	0.86

Sequence Information

Coding Sequence: ATGCAGATTATGGAGGAGACTTCGCAAGCGACCCAACTGCAGGTAATAGGAAAACTGGAGCCAGTGGCCTGTGAGGAAGATGATGCAGAGGAAGTTGGCATGAAAGAAATGGAAATCTACAATCACTCTGATCAGCAAGTGATTGAAGAAATCCATGTATCCAATACAGATGGAAATCTTCATATCAACACTTATGAAGTTCAAGAGGAAGTAATTGACAACAgtgAATATGAAGAAGGCAGTGAGACTCATCATGTAATCATTACTGAAGATGGGACATTCCTAGAGCAACATCAAGTCTACGTAGAGGAAGAAGTCCAAGATTATGAAGAGGAAGCTCAGGAATTTGAGGAAGCACAATATGAAGAAGCTGAATATGTAGAAGGAGAAGAAATGGAAGAGGATGACCCTGATGAGGATGCACAGTATGTACAGGAAGAAGATGAAGTGGAGACAATATATATGGAGCAGGATGATCATGATAGTGATACTGCTGGTGATGAGGACCCTGATGATCCAGATTTTAATGTGGAAGAAGAAGATCAAGATCAAAAAGATGAGATAAACCCATGTACAATTTGCTTAAGATCCTTTAAAACTACAGCTagCTTAAAACGCCATATAACAGTAGCACATGGTCAAGAGGAATATACCAATGATGAAGATCCTTTGGCATTTGAGCTTTGTGCTTGCTGTGGGGAGCCAATTGACTCAGCACATACAACTGGTTCTATAAAGTGCACCCATtgtgataataaattgtttgatatGCAAAGCAATTTATCACGTCACATAAGTTTAGAGCATCCCGACGAGAAAGGCGTGTACAAGTGCTGCGAATGCGCTCGAACATTCCTTAGTCATGCTGCTATACTTAAACATATGCAATCACATCCGCTGGCAAAGCCATATTCGTGCAAAGCTTGCAACAGGGATTTCACTCGGAAATACCATTTGGAACGCCATGTCGCTCAGACCGGTTGCGATGGTCAACCGAGAAGCTTATTCAAATGCGAAGTATGCAAAAAGACGTTTACTCGAAAGGATAACTTGAGAGATCATCTGCGAGCTCACGCTGGTCAgattaagaagaagaaggtgtTTACTTGCTCCTATTGTAAAAAGGAATTTATGGGTTCTGCACTTTTAGCTGTACACGTCCGTACTCATACAGgCGAAAAACCTTATCCTTGTGACCTTTGTCCTAAGCGTTTTCCATCGAGTGGAGCTATGAAGAAACATCGTAGAATGCATACCGGTGAAAAACCATATCAATGTATGCAGTGTAAGAGAAGATTTGCCGCCAAAGAAACTTTGAATCGTCATATGAGAACTCACACTGGTGACAAACCTCACAAATGTACCTATTGCGGAAAAGCTTTCATACAGGCTGCACAATTAAGGGCGCACATTTTCCATCATACTGGAGAAAACGCGTTTACTTGCCCCCACTGCAATCGAGCCTTCAATAGGCGAATCCGTCTTACCACCCACATCAAGTTTGTGCACGAGGGAGCTGAACCGATGAACTGTCCTGAAGACAATTGTGACAAGACTTTCTATAGGAAGGAAGATTTGGCCAGACATTTGAACCTTCACTCTGGCGAAAAAcCATACGAGTGTGAACATTGCAAGAAACGTTTTGCTGTTAAGGCTTCTTTGAAACTCCACGCTTTAACGCATCGCAAAGAACAACCTTGCTCCTGTGACGAATGCGGTAGAGCTTTCATACGACAAGATTGTCTTATGCGTCATATGCGTTCCAAGCATCGCGATGTTCTCGAAGACATCTTAGCTGGCGCAGAGAAACGTCGGTTGCAGCAGCAGCTTCTTTACGCAGCCACTGATGCTTCTTCAGTGACCAAGAAGGAAATTACCGAATCTCAAATCTGGACTGAGCTAACTTTGACAGATTCGATCAAGGAACTTTTGGGTTTGCTTGTTGATGAGAAGACTCTACTAGGATTCGGATGGCCAGATGCCCCGATCGACAAGATCTTGGATTCCGTGATCAAGCGGTGCGGCCACGAACCGGCTTCTGACAAGGAGTTCGATTACATAAGCAAGATGCGCGAGAACGCAAAATTGTTGTTCACCGTTGTTATCGATGATCAAGCTGTTAAATCGTTGCTGAACAATCAGACTGTCGATGAGGTCATCCAACATGTTCTGAGGCTCGCGAAGAACGAATGA
Protein Sequence: MQIMEETSQATQLQVIGKLEPVACEEDDAEEVGMKEMEIYNHSDQQVIEEIHVSNTDGNLHINTYEVQEEVIDNSEYEEGSETHHVIITEDGTFLEQHQVYVEEEVQDYEEEAQEFEEAQYEEAEYVEGEEMEEDDPDEDAQYVQEEDEVETIYMEQDDHDSDTAGDEDPDDPDFNVEEEDQDQKDEINPCTICLRSFKTTASLKRHITVAHGQEEYTNDEDPLAFELCACCGEPIDSAHTTGSIKCTHCDNKLFDMQSNLSRHISLEHPDEKGVYKCCECARTFLSHAAILKHMQSHPLAKPYSCKACNRDFTRKYHLERHVAQTGCDGQPRSLFKCEVCKKTFTRKDNLRDHLRAHAGQIKKKKVFTCSYCKKEFMGSALLAVHVRTHTGEKPYPCDLCPKRFPSSGAMKKHRRMHTGEKPYQCMQCKRRFAAKETLNRHMRTHTGDKPHKCTYCGKAFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRIRLTTHIKFVHEGAEPMNCPEDNCDKTFYRKEDLARHLNLHSGEKPYECEHCKKRFAVKASLKLHALTHRKEQPCSCDECGRAFIRQDCLMRHMRSKHRDVLEDILAGAEKRRLQQQLLYAATDASSVTKKEITESQIWTELTLTDSIKELLGLLVDEKTLLGFGWPDAPIDKILDSVIKRCGHEPASDKEFDYISKMRENAKLLFTVVIDDQAVKSLLNNQTVDEVIQHVLRLAKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01058575; iTF_01059256;
90% Identity: iTF_01058575; iTF_01059256;
80% Identity: iTF_01059256;