Basic Information

Insect: Nicrophorus vespilloides
Gene Symbol: SMARCC2
Assembly: GCA_001412225.1
Location: NW:159265-164886[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 8 5.8e+03 -3.1 0.0 32 43 204 215 202 216 0.85

2 2 8.8e-15 6.4e-12 44.8 0.1 3 44 629 670 627 672 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	8	5.8e+03	-3.1	0.0	32	43	204	215	202	216	0.85
2	2	8.8e-15	6.4e-12	44.8	0.1	3	44	629	670	627	672	0.95

Sequence Information

Coding Sequence: ATGATTGCCTTCGGCCCAAAGAAGGACGGCAGTCCaaacgtaaaatattttgaatccCCCGAGACGCTGAGTGCCTTGGAGGTGGTAAAACTATGGCTTCAAAAGACCGCGAAAAAGTTTATTCAGTCAGATCCTCCAACAAACAAATCATTATCTTcgttaataattcaaatgctACAATTCCAAGAAGACAACTTGGGAAAGAACATACAGAAACCAACAATGTCTAGGATACCAGTGAAATATTTCATGGATTTTAAACCTGGCGGTGCACTCTGTTATATGTTGAGTACAGCTTACAGGTTTAAAATGGAACAGGGCTGGAGAAGATTTGAATTTCAAGCTGCCAAAGATCCTTGTTTGCAGACCCCAGCTAGGATATCATCCTTGATAGAAATGTTTCAAATGATGGAGAAAACATTGGTCCagaataaattgtatattttgccTGTGATCTATGTTAAGCCAGAAATTGACAAAAATCTTGCAATGAAATTGAAGGATATTATTAAGAAGAGGAATGGCCAAGTTGTTGAATCTGAGATGAGTGCTACCCACATTCTTTATCCACACTGTGACCCACTAGAAGAGGAATATGCCAGACCTGGTATGAGACAAGATAAAATGATCATGATGCACTGGTATTATTTCCCAGATTCATATGATACCTGGGTAAATGTTGAGGGTGCTCTAGaagGAATGTCAACAGAAACTCCACCTCTGCACACGGGTACCTGGCGTGTTTCTTCCACGTGGCTTGTGGATTCTGATCAATACAACGAATGGATGAGCGAAGAAGACTACGAGGTCGACGAAACTGGTAGAAAGAAAACACATAAGCTCCGGCTCTCTGTTGAAGACCTGATGAACCCAATGGGTGATCCGGATAAGAACAAGGGTGACAAAGAAATGGCTGAATGCTCAAATCTTTGCAACAGATGGAACAACCAGGACTTTGCTGAGCAACATGAGCACTTTTGTTCATCTATAAAGAAAGCTGGAAAACGGAAGAGATCGCCATCACCACAGATGAAGGGCGGAAAGAGGAAAAGCGGCAGAAGTCCAGCGGTTGGGAAGAAAACTAGGCCAGAGGATGCTGAATCGGAAGATCTAACGAAGGAGATGGAGGATCCACCACCAGAACCGAACGTGCTAGAGGTGAATCCTTCGACGTCGGCGCAATTAGGTAAAAAGGATCACGAGTTGCAACCTTTGAAGGGAGGTTCCATCACGGACATGGATGATACTGAGGAACGTTGTGAGGATTCCCAAACCGGAAAGAATTCCGATACAACGACGCAAGACGAAGGGCAGGAAGATAATGTGACTGAGCAGACGCATCATATAATTGTACCGTCATATTCTTCATGGTTTGATTATAATTCGATTCATGAGGTCGAGAAAAGAGCGCTTCCCGAGTTTTTCAACGGCAAAAATAAATCGAAGACACCGGAGATTTACTTGGCTTACCGGAATTTTATGGTAGACACATACAGGCTTAACCCAACTGAGTATATTACCAGCACGGCTTGTAGGAGAAACCTGGCTGGTGATGTATGCGCTATAATGCGAGTTCATGCATTTCTAGAGCAATGGGGTCTGATAAATTATCAGGTTGATACGGAATCGAGACCGACGCCAATAGGGCCACCACCGACGTCTCATTTCCATATCCTCTCAGATACCCCATCGGGTTTACAGCCGGTTAATCCGCCAAAGACTCCTCAGCCGAGTGCCGCTAAAACACTTCTTGACTTGGACAGAGCGCAGGAAATcaagaaaactgaaaatatagaaTCAATATCAAGCTTTGGTCTGAAACTAGACCAATACTCGAAGAAACCAGGTGCGCTGAAGAACAAAAGCGCTGCTTCCTTAGCCAGGGATTGGACAGAACAGGAAACATTACTTCTCTTAGAAGGTTTGGAAATGTACAAAGATGATTGGAACAAAGTCTGCGAGCACGTCGGTTCCCGTACACAGGACGAGTGCATTCTGCATTTTCTCCGCCTACCAATCGAGGATCCCTATTTAGAAGATCCTGAAGCCGGAGGAGCATTGGGACCGCTTGCATACCAACCTATTCCGTTCAGCAAAGCTGGTAACCCAATCATGTCCACAGTCGCTTTCCTTGCATCAATTGTGGATCCACGCGTTGCCGCTGCGGCCGCTAAATCAGCAATGAATGAATTCGCAAGTATCAAAGATGAAGTTCCCGCTGTCCTAATGGATGCTCATCTGAAAAATGTAGAAGCATCCTCCACTGATGGTAAATACGATCCAGCCGCCGGGTTAGCGTTGAGTGGTATTGCGGGAACTGTGCCTGagaaagaagaagatgaaaataagATCAAGAAAGAAGagGGTAAAGAGGACGAGAAAGTTGAAGATCAGAAAAAGAACGGAATCGAGAGCGCCGATGAGAAACCCGAAGACAAGGTCATGAAGGTGGAATCTCAGGATGAAAAGGACGATAAATTAGATACGGCCGACGTGAAGCCGGAAAAGGTAGTCAGAGACAGTGAAATGCAAAGCGCCGCCGCCGCAGCATTAGCTGCAGCCGCCGTCAAGGCAAAGCACCTAGCAGCTGTCGAAGAACGGAAGATCAAGTCTCTGGTTGCCTTGCTGGTTGAAACGCAGATGAAAAAATTAGAGATTAAGCTAAGACACTTCGAGGAACTGGAGACGACTATGGAACGGGAACGCGAGGGACTTGAATACCAGAGGCAACAGCTTATCACTGAAAGACAACAATTCCATTTGGAGCAACTGAAGGCTGCCGAATTCAGGGCGAGACAACAGGCCCATCAGAGGATGCAGGCAGAGCAAGGGCAACAATGGCCTCAGCAGCAGCCTGCTGCGTCGCACACTTCATCCTCTGAAACTGGACCAAATTCCACCCCGACGCCGCCGTCTCCTCAAGCTGCCGCCGTAGCGTCTCCGGCTCCGCCGCATCACCACATTTAA
Protein Sequence: MIAFGPKKDGSPNVKYFESPETLSALEVVKLWLQKTAKKFIQSDPPTNKSLSSLIIQMLQFQEDNLGKNIQKPTMSRIPVKYFMDFKPGGALCYMLSTAYRFKMEQGWRRFEFQAAKDPCLQTPARISSLIEMFQMMEKTLVQNKLYILPVIYVKPEIDKNLAMKLKDIIKKRNGQVVESEMSATHILYPHCDPLEEEYARPGMRQDKMIMMHWYYFPDSYDTWVNVEGALEGMSTETPPLHTGTWRVSSTWLVDSDQYNEWMSEEDYEVDETGRKKTHKLRLSVEDLMNPMGDPDKNKGDKEMAECSNLCNRWNNQDFAEQHEHFCSSIKKAGKRKRSPSPQMKGGKRKSGRSPAVGKKTRPEDAESEDLTKEMEDPPPEPNVLEVNPSTSAQLGKKDHELQPLKGGSITDMDDTEERCEDSQTGKNSDTTTQDEGQEDNVTEQTHHIIVPSYSSWFDYNSIHEVEKRALPEFFNGKNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTPIGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRAQEIKKTENIESISSFGLKLDQYSKKPGALKNKSAASLARDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAVLMDAHLKNVEASSTDGKYDPAAGLALSGIAGTVPEKEEDENKIKKEEGKEDEKVEDQKKNGIESADEKPEDKVMKVESQDEKDDKLDTADVKPEKVVRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRMQAEQGQQWPQQQPAASHTSSSETGPNSTPTPPSPQAAAVASPAPPHHHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00902171;
90% Identity: iTF_01058353;
80% Identity: -