Nves000290.1
Basic Information
- Insect
- Nicrophorus vespilloides
- Gene Symbol
- cnc_1
- Assembly
- GCA_001412225.1
- Location
- NW:50909-51930[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 1.5e+03 -1.3 0.2 19 28 6 15 6 23 0.72 2 2 1.3e-17 7.3e-15 54.1 1.7 3 64 64 125 62 126 0.95
Sequence Information
- Coding Sequence
- ATGCAACGACCCATCTCCAGGGATAAGAGGAAGATTAGGAAGGCCGAGGAGGAAGATCTAACTACGGATGAGAAGCGCGCTCGTGCCTTGAGCGTGCCAATCTCCGTTGACGAGATCATCAATTTGCCATTATATGAATTCAACGAGCGTCTTTCCAGGTGCCACCTGAGTGAGGCACAGCTTAGCCTGATCAGAGACATTCGCCGTCGAGGCaagaataaaGTAGCAGCACATAACTGCAGAAAGCGCAAATTGGATCAGATTTTGAACTTGACTGATGAGGTGAAAGACATGCACGACAGGAAGTTTCGACTCCTCAACGAGCACGAGTTTCTCTCAGGCGAATGCCAACGCGTAAAAGACAAGTACCTGCAGCTTTACCGTCACGTATTTCAGAATCTACGAGATCCTGAAGGTAACCAGTATTCGCCCCATCAATACAGCCTGCAAACATTCGCGGATGGTTCGATCCTGGTCGTGCCTCGCGCTATCTCGAGCATCACGAATCCAGAGAGAAAGAAACTACACCCGCCTGGTCGCAAGGAGTGA
- Protein Sequence
- MQRPISRDKRKIRKAEEEDLTTDEKRARALSVPISVDEIINLPLYEFNERLSRCHLSEAQLSLIRDIRRRGKNKVAAHNCRKRKLDQILNLTDEVKDMHDRKFRLLNEHEFLSGECQRVKDKYLQLYRHVFQNLRDPEGNQYSPHQYSLQTFADGSILVVPRAISSITNPERKKLHPPGRKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -