Basic Information

Gene Symbol
TRERF1
Assembly
GCA_963457615.1
Location
OY735141.1:7751138-7773283[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-11 7.8e-08 32.6 0.1 2 46 1377 1421 1376 1421 0.97

Sequence Information

Coding Sequence
ATGTGTTCTTGTGCCTTCGctgccgccgctgccgcctccACCACTGAATCACCCGGGTCAAAGTCCATCGGTCCCCACGGAGTCCACGAGCTGGGAGTTCGACTGCCGCTGCAGCCGTACACCGGGGGTCATGCGGTCTTCATGTACAGCACCGCAGCCGATGGCAATGTCACTCTTCAGCTCAAGGAACCGGATGACCTGGACAGAGGAAGTCTGGCAGCGATGCTTGCCCGTCTTCAGGACGATACCACCTTCTCCATCTCCTACCAGGACACGGACATCCTCTCCGATGGCAGCATTGACGTCCTCCTCGGAAACaacaaccttcagacgactcCAGttggtGCAGAGGGTGATGGTGGTGCGACGGCGACGTCGGCGACGAGAGGAACACCGACGACCTTCGACCTGTTCGATTCGCCAACCGGACAAGACGTGACGCTTTCGCCGCAAACGTTCACCAACTCGGCTGAGCCCTTCGTCAATGACAGCTCGGACAGCATGGGCGTTCCCAACGAAGGACCCGACCCAGTTTCCTCGACGGACGACAAGAAAGTCGTGTCTACGTCCACATCTACGTCGGACGTCGTGAAGTTGAGCGTGAAGAGATCCCGACCGAAAGCGGCTTCGCCGAATCGTCAGGGTCCTCAGCAATGCCAGgTTTGCGCCAAGGTTTTCGGCAACGCTTCAGCTCTGGCGAAGCACAAGTTGACGCACAGCGATGAGAGGAAGTACGTTTGCAACATGTGCGGGAAGGCCTTTAAACGTCAAGACCATCTGAATGGTCACATGCTGACGCATCGGAACAAGAAACCGTACGAGTGCAAGGCCGAAGGATGCGGGAAGTCGTACTGCGACGCCCGATCGCTCCGAAGACACACGGAGAACCATCACAGCTCTTCATCGTCGTCTTCGTCGTCATCGTCCTCGTCGTCTTCCTCTTCGTCATCGTCGTCTTCCTCGTCCTCGTCATCATCTTCGTCGTCATCGtcatcatcttcatcgtcGACGCCGTCGCCACCGACCTTCTCCTCAGGTACCTCAACCTCTGCAGGTTCATCGACGATGACAACGGCGACGACGTCGAGCATTACCTTGGCGACGACGACTACGAGCACGTCGAGCGCATCTCCGACGACGACGTCGCCTAGATCTTCGCCGTCGGTTGCATCGACGACCGCAGCAGCTTCGAAGACAACGTCCACATCAACCACCGTAAACTCCCTGTCACCTGCGCAGGGAGCAGCAGCAGGAGACGCAGCTTCTCCGCACGGATCTAGCTGCATCCAGTACGCACCTCCACCGACCACCTCCACTAGCTCCACAAACTCCAACAAGAGCCATCTTCAGCAACTGCTGGCAACAGAACCAGTAAagAGCGTAAACGGAAGCGGCGGCAATAACGACGGCCTCACCAAGCAGCAACTCGACCTGATACATCAGATCATGGAGCAAACTCAGAGGCAGTCGCATGGCCATCAGCCGCAGCCGCAGCCGCATCACGCACCATCGAAATCCTCCAGGTCAAAATCGTCGAGCAAAAGCTCCAGCAAAAGCCAGAGGGCTTCATCGAGTTCGAACAAAGGGTCAAGTAACAGCAACAGTTCGACGTCCAGTACGACATCATCGTCGACGAGTTCCAAGGTGAGCTCCAGCAGTAATGCGACGAGCACGACGACGGTTGCAAAGGCCGACCAGAAACCAGTCGAGTGCAATCTCTGTCACAGGAAGTTCAAAAATATACCGGCTCTGAATGGACACATGCGTCTTCATGGAGGTTACTTCAAaaagGATGCGGACAGTAAAAAGTGCGAGAAGAAGGATAATTCCGGACCTCCGCTTCAGACTGCGAGTGTCAGCGTGAGGGCGCTGATCGAGGAGAAGATTATCAGCAAACGGATAACGAGCACATCGACCGTGGTCACCGCTTCTGCGATGGCAACGCCATCCGGCGAGGAGACTACGACCACCACGACGATGACGACAACGACGTCGACGACGGCGTTGGGAAAGGCGCCGCCTCTGTTCCCACTAACCGTGCATTCCTCGACCGATTTGGATACGAAGATCACATCGTTCGTGGTGCCTGCACCACCTGCACACGACAAAGCCCGCAGACATTCCGACGCAGACGTCTCCTTCACGATGCCCCGAGTCCTGCAGACGCACACGCATCACTACCAGacgcagcagcaacagcaagaGGCGGCAGACGCCCTTGCCGACCTCATCCTCAATAAGCGAGCGATGGAAACGAATCGAATAGTGAAACGGACAACTTCGGATCCAGGTCAGATCATACAATTCCAGAGCACCGGAGAGTCCACCTTCACTTTAGCATACCAATCGGATGATGGAGGATACATCAGTCCGAGTCTGCAAGATGAAGTTTTCACACAAGTGCAGGATACGATGCTTCTACAGAGTCAGCAGCTGATACAATTCCAAACGGAGACTTTTGATCAGAGCGAAGAGATGGCGTTAGATTATGCGACTTCTGTAGTTCACTCGACCATCCCTTATCAAGCGGGTCAAGTTAATCAGGATCTTCAGGCCGTTTTGGACTCGCCACTTCCAGAAAGTTTAGCGGAGTTCAGCACTTACCACTCGAGCGGTAACCTAGAGCTGCCTTCTCCAAACTACCATCACACGCAATCTCCTATACAATACTCTAACTCACCGCACACGTCATTACCGACGCAATCGCCGCTGCAGTCGCCTCTCATCAGGCACGATTCTCCTGGATTCGCATATCCAACACCTCCTGCGAGTCATGAGGGTCAAAGCCCTTGCTTCGCACATAACTCGCTCATGCCGATGGTTTCGCCGAAGCATAATGACTTTGTGGAGCCGCCGCAAGCATCTTCACCGCTCTCCGCGGCATTCTACACCTCCACCATGTCAACCTCGGCTGAAGTCGAAGAAGCTCTCGAAGAAGTGTTACCTGGTGAAAGCATCGCCGCTGATGAATTGTATCCATCTTTAACGAACTCTCCTCCGCCGCAATCTCCTCTCCTAACACCAGTTCCATCACCAAACATCCCAACATCAACAGTTCCTTCTCCTCAGACCTTCATCCCTAACGTTTTTCCTCAATACACTCTTCAATCGCAGATGCTTCCCAATTCCGATGATCCTCTTCTTTCGAGTAGTCCGAAAGATTTCAACGCTAAGAAGCGTTTCGAGTTTAACGGACTTCCGTTGAAGGTGATCAGTAATGGCTTCATCGACTTCAACAGTCCGAATTTGACGGGTATATTGGTGGAAACGAATGGAGAGATAAAGTTTATACAAACAGGACCTACTGCTTTTCATACGAAGAACATCTTGCTCACCGGTACACCAATCATCGCGCAAAACGCAAAAGTTTTGCAGACCATCGCCATGCCAACAACTGTTAAACAACAACCGGCGCAGattcagcagcagcagccggtGATACAGAGACCTCCGAAGCTGCAAGAGCAGGAGCAGGTCTTCCTCAGTCCAACCACGATTCCACCTGCAAGTCCTGTGAGAGCGTCGAGGAAGAGGCCTCGAGTCGAGCCGCTGCAGCCGCCCCATCAGAGCAGGTTACGATCGACTCGAAGTCGTCACCATCCTCCTCTGCAACAGAatcaacagcagcagcatctGCAGCAGTGTTCTACGTACACACCGCAACCGATCCTCAACCCTAGCCGCCCTGGATCAGGTCTCTACTTCTTTTTAAAGCAAAAGTCCAAGAACGATGATGGCCTGGAGATGGCGTTGGATCGGTCaacatcgtcgtcgtcgtcgccgACGCCCCCAGAGACGGACTCGACGCCGCACGTCAACGTCGGACCGCAGTTCCAGTGCGCGGTGCCCCCATTCCGGCCCGTCCGTAATCGCGTCACCCGCGACAGGAGTCACGAGGACCTCCTGTGGGATCCCGGCATAGCCGGCTGCACCGACGCAGAAGTTGACATGTACCTGGACTTTGCCTGCTGCGCCGCCATCCCAGGAGGCGGTAGGAATCAGGAATACGCCATCCACCTACTGCACATGTGCGGCGGCAACATTCACGAAGCGATGCTAAAACTGATGCAACCAACACCGTCTCTCCCATCGGACCATCCGCTCCTTTGCTACCAGTACTCGGAGAGCGACAAATGGACAGCGTCGGAAACAGAAATTTTCCATCTGGCACTTCAGAAACACGACAAAGACTTCTTCCTGATTTCCAAAGAGgtTGCCAGCAAAACAGTGAAGCAGTGTGTGCAATTCTATTACATGTGGAAAAAGGTCTGCACCGACGAGTACAGAAGATTGAAGGCGGGCCGCGAGCGTAGGCAACCGCACATCTTCAAACACGATTACGACGAGGACGTTAAAATGATGGTGATGGGAGACCACAAAACATTCGTATGCGAGATACAGGATTGTTCGGCCAGTTTTCATACGCGAGCCGCGATGAACAGCCACATTCGCGCACACTCGCGGCAATCTCCGACTCCCACGCATATTCACCATCACCATGGAAACAATCACTACCAGCAACAGCAGGTGTCAGAGCGGAAGACGTCTGTGACGTCTTCGACGCAAATACATCATAAAACAGTCCTCTGCCACACCGACTCCCACGAAGACTACCCCTGTAAGATCTGCGGGAAAGTATTCACGAAGATCAAGAGCCGCAGCGCGCATATGAAGTCCCACCGTCCACCGGATGCGGAAACGGCGGCGACGCGTCGCAAAGAGGCGGCGAACCGTACAACCGAACAACCGATGATCGTCTCCTCATCCACTTCCGTTTCCACCTCGTCGTCGTCATCGTCCTCCTTAGACTCCGTGCCGAGTCCATTCGATGCGTAG
Protein Sequence
MCSCAFAAAAAASTTESPGSKSIGPHGVHELGVRLPLQPYTGGHAVFMYSTAADGNVTLQLKEPDDLDRGSLAAMLARLQDDTTFSISYQDTDILSDGSIDVLLGNNNLQTTPVGAEGDGGATATSATRGTPTTFDLFDSPTGQDVTLSPQTFTNSAEPFVNDSSDSMGVPNEGPDPVSSTDDKKVVSTSTSTSDVVKLSVKRSRPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCNMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTPSPPTFSSGTSTSAGSSTMTTATTSSITLATTTTSTSSASPTTTSPRSSPSVASTTAAASKTTSTSTTVNSLSPAQGAAAGDAASPHGSSCIQYAPPPTTSTSSTNSNKSHLQQLLATEPVKSVNGSGGNNDGLTKQQLDLIHQIMEQTQRQSHGHQPQPQPHHAPSKSSRSKSSSKSSSKSQRASSSSNKGSSNSNSSTSSTTSSSTSSKVSSSSNATSTTTVAKADQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDADSKKCEKKDNSGPPLQTASVSVRALIEEKIISKRITSTSTVVTASAMATPSGEETTTTTTMTTTTSTTALGKAPPLFPLTVHSSTDLDTKITSFVVPAPPAHDKARRHSDADVSFTMPRVLQTHTHHYQTQQQQQEAADALADLILNKRAMETNRIVKRTTSDPGQIIQFQSTGESTFTLAYQSDDGGYISPSLQDEVFTQVQDTMLLQSQQLIQFQTETFDQSEEMALDYATSVVHSTIPYQAGQVNQDLQAVLDSPLPESLAEFSTYHSSGNLELPSPNYHHTQSPIQYSNSPHTSLPTQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFAHNSLMPMVSPKHNDFVEPPQASSPLSAAFYTSTMSTSAEVEEALEEVLPGESIAADELYPSLTNSPPPQSPLLTPVPSPNIPTSTVPSPQTFIPNVFPQYTLQSQMLPNSDDPLLSSSPKDFNAKKRFEFNGLPLKVISNGFIDFNSPNLTGILVETNGEIKFIQTGPTAFHTKNILLTGTPIIAQNAKVLQTIAMPTTVKQQPAQIQQQQPVIQRPPKLQEQEQVFLSPTTIPPASPVRASRKRPRVEPLQPPHQSRLRSTRSRHHPPLQQNQQQQHLQQCSTYTPQPILNPSRPGSGLYFFLKQKSKNDDGLEMALDRSTSSSSSPTPPETDSTPHVNVGPQFQCAVPPFRPVRNRVTRDRSHEDLLWDPGIAGCTDAEVDMYLDFACCAAIPGGGRNQEYAIHLLHMCGGNIHEAMLKLMQPTPSLPSDHPLLCYQYSESDKWTASETEIFHLALQKHDKDFFLISKEVASKTVKQCVQFYYMWKKVCTDEYRRLKAGRERRQPHIFKHDYDEDVKMMVMGDHKTFVCEIQDCSASFHTRAAMNSHIRAHSRQSPTPTHIHHHHGNNHYQQQQVSERKTSVTSSTQIHHKTVLCHTDSHEDYPCKICGKVFTKIKSRSAHMKSHRPPDAETAATRRKEAANRTTEQPMIVSSSTSVSTSSSSSSSLDSVPSPFDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01058650;
90% Identity
iTF_01058650;
80% Identity
iTF_01058650;