Ninv007942.1
Basic Information
- Insect
- Nicrophorus investigator
- Gene Symbol
- bab2
- Assembly
- GCA_963457615.1
- Location
- OY735142.1:1692317-1695914[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-17 9.5e-14 51.1 0.0 2 45 398 442 397 442 0.95
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAGTACTGTCTCAGATGGAACAATCACCAGCCGAACTTCATTTCAGTGTTCTCCAGCCTCCTTAACAATGAGTCCCTCGTGGATGTCACACTGTCTGCTGAGGGAAGACATCTGCAAGCGCACAAGTTGGTTCTTTCCGCTTGCAGCTCCTACTTCCAATCTTTGTTTACAATCAACCCATGTCAGCACCCTATTGTCATACTTAAAGATGTCAAGTTCATAGACTTGAAAGTGATAATCGATTTCATGTATTATGGGGAGGTGAATGTGTCTCAGGATCAGCTGCCACACATCCTGAAAACAGCTGAAATGCTGaaaattaaagGACTCGCAGAAATCCCTGTAGAACCTTCAGGTAAAAGCCAGAATAATTTATCAGAGAAAGCAGAGCTTCTCACACCCAACGATCCAAACTGGAACAGTACAGACAATCAGCATAGGCAATCTCTATCCCCATCCCCATGTCCTTTATCACCTGGAAGTAAaagGAAACGTTTGAGGAAGTCTTCGACGGGTTCGGGGTCCGGGTCGACGGATCGAACGACAGTTGTCGAAGACCATGGACCTAATGAAGTAACCTTGACGTCCCCTCTGGGGACGGCAGTTATAAAACCCGATCCAGGCGGTTTCTCCTCGGATATGAACAACGCAGGCGGCACCCCTCAACGAAAATCGCAACAACATGGATCCGACTCGGACATGCATCGTGGCAGCTCCCACGAGAGCATGGACAGCGAATCATCTCCCCATCAGATCACCCTGCAAATCCCGCAGCAGGAAATGCCAGTCCAGCACTCCGTGGAACCGCCCACCGCCATCGAAATGCCCGGCCCATCATCGACGACCACCCAAACTGTCACCGGTTACCAATGGGGTATAGTCGACCACAGCTATCCACATTTCACCCAAGCCACCCTAACATTACCCCAAGAACTACAGTACACCAACAATCCCCCACCAATAACAACTCACAATTACCATCACACTAACATATGCACGAACGGTGCGACAGCCGGCTCAACCTCCGCTGCGACGGCCTCCTCGAATCATCCGATGGAGGCGCGGCCgacgccgcctccgccgcagCCGCCTCATGCACCACAACCGCCGCAGCAGCAGGTGCCCGCCTCGCCGCCGCAGACGGTGCAGAAGCGCAAGAGGAGCGTCAACCCGCAGGCTGATGAGAACTTCGTGCGAGCGCTCGAGGCCGTCCGGTTCGGTGGAATCGGGTTCTGCAAGGCGGCCCGCATGTACGGCGTCAACAATCGCACATTGTGGTTAGAGTACAAGAAGCGAGGATATCCGATCAGCAGACTAAGCATCAAAAACAGAAAGCCTGAGAACAATCAGCTGCAGAGTCAGGAGAACGATAGTCCGCCTCCGACGGAGCCCTCTGAGGAGTcccaacagcagcagcaacagcaacaacaacagcagcaacaacaacagcatcaGCAACAGCACGCAGTTAACAATCCGATAGCTATGATCAGCGGGGCCTTCATCGACGGGCGACCCGTGGAGATATCTCCGGTGCTTCAGAGGTCGCGATATTTCGATAACGGCCTTCTGCACACGACTCCCATCAACCTGCAAGGGCTTAACTTCGATCAGATGTAA
- Protein Sequence
- MSMQQYCLRWNNHQPNFISVFSSLLNNESLVDVTLSAEGRHLQAHKLVLSACSSYFQSLFTINPCQHPIVILKDVKFIDLKVIIDFMYYGEVNVSQDQLPHILKTAEMLKIKGLAEIPVEPSGKSQNNLSEKAELLTPNDPNWNSTDNQHRQSLSPSPCPLSPGSKRKRLRKSSTGSGSGSTDRTTVVEDHGPNEVTLTSPLGTAVIKPDPGGFSSDMNNAGGTPQRKSQQHGSDSDMHRGSSHESMDSESSPHQITLQIPQQEMPVQHSVEPPTAIEMPGPSSTTTQTVTGYQWGIVDHSYPHFTQATLTLPQELQYTNNPPPITTHNYHHTNICTNGATAGSTSAATASSNHPMEARPTPPPPQPPHAPQPPQQQVPASPPQTVQKRKRSVNPQADENFVRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPISRLSIKNRKPENNQLQSQENDSPPPTEPSEESQQQQQQQQQQQQQQQHQQQHAVNNPIAMISGAFIDGRPVEISPVLQRSRYFDNGLLHTTPINLQGLNFDQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058528;
- 90% Identity
- iTF_01058528;
- 80% Identity
- iTF_01058528;