Ninv013864.1
Basic Information
- Insect
- Nicrophorus investigator
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963457615.1
- Location
- OY735144.1:1207022-1217389[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-18 1.9e-14 53.3 0.1 1 44 477 521 477 522 0.94 2 2 1.1e-18 2.4e-15 56.2 0.0 1 43 871 914 871 916 0.95
Sequence Information
- Coding Sequence
- ATGGGTAGGAGGAAATGGAAGCTGTATCAAGACTCGATGCAAAGGAATTACTTGCAGCCGCTGAACAACAACGTGAGGAAGAACGAGAAGTATCAGAAGcaggagcagcagcagcaggaggTGGAAGACGAGGAGCGAAGAGGTGCGAAGGAGCACTTCGAAGAAGCGGACGTAGAGCTGGGGGAGGAATTagcgaggaggaggaggtcgTCGACGACGGCGACCACTACGACGACGGCGCCCAGGGAGCGGGCGACCCGCGGGGACGGGGAAGAAGAGCagcaggaggaggaggagatcGAGGAGGCGGCGGTGGTGGCTGCGAAAACGGCGGTGGCGGTCGCTTCCGGTCGGGGGGAGGAAGAAGAGGACGACGAAGACGAGGAGGAAGTGGAAGAGGAAGAAGGGGAGGTGACTGCGACGGCGGCTTCTGCGAAGACGGCGCTCGCCAAGGAACAGGAGCAGGAtctggcggcggcggcggcggaagCGGCTGCCCTCGCGGCCACCGCGACCGCCAGCCCCACGACCggaacgacgacgacgacgactgCTGCCGACTGCAGGCGCGACTCGGACGACGTCACCGACGCCGACGACGAAGACAAACTCAAGGACTGGACGCCCCAGAGCAAGTGCTACTTTTGCGTGGACGGCAAACTGGATGAACACAACAATCACGGGGGTTTGAGTCCCCACCAGAGCGACTCGGATTCAAGTGACAGCCGGAGCGACCTGGAGGCGCCCCCTACACTGACGCCGACGGGGACGGCGTCGACGACGGCTTccgcggcggcggcggcgtcgcTGCTCAATAACCTGAACAGCCTTAACCATCCGAACAGCAGGAACATGACGGCCCTCGAGAGTGTCACCTCGATAGCGGCGATAGCGACGGTGGCGGCGATGACGGGGAACGGTGGTCCaggtggtggaggaggaggcgtCGGTGGCCACCACCAGCATCACCAGCCCCATCATCACCATCCTCATCTGTCGTTCTATCCGCCCAACCTGTTGTCTCAGAACTGGTTCCACCTGACCAATTTAGCCAGAAACTTCCATGCGAACTCCAACGATACGGAGaaggtggcggcggcggcaaccGCAGccgctgcagcagcagcagcagccgcaGCGGCAGCAGCATCCGCCTCCGCCGGCGAGCAGCCCCTCGATCTCAGCTCCAAAGGGACCACAGTAaccaataacaacaacaacacaaacAACACCATCATCACCAATAGCAACAACAATGCCGCctccaacaacaacagcatcaataacaacaacaacgccATCGTCGCCGCCTCCGTCGACAAACTCAACGTCAACGCGAGACTATCTTCTCTCGACAACAAACAGATATTCAATTCTGATTTTAGAGCGAAGCCTAGGATGTCAGCAGTTGCCGGAAGGAGGACCTACACGGAGGAGGAACTGCAGGCTGCGTTGAGGGACATCCAGTCGGGTAAATTGGGAACGAGAAGGGCGGCCGTCATCTACGGCATCCCCAGGTCGACGCTCCGAAACAAGGTGTACAAATTGGCGCTGGAACGAGAAAGGGAATCGCACCTGAACTCGTCCGCATCTGCTGCAGCCACGAATCTGTCCAAGCTGGACGACGAGGAAGCAATGGACGAGGATAAAGAGCTTTCCGGAGCtgaggaggagaaggaggtGGAACGGGCACTGCAACGCCCTCTTTTATCGATGGACGATCTCCTCTCGAATTTGGAAAATTCCGAAGCGATGAAGATGCTGCTGCGAAAATCTAAAGATCAGCAGCTTCCGCCCGGCGTCGCACTGctccagcagcagcaacagcagcacaATCTCAACATGAATCTGCATCAGCAGGAGAGCTTCGCCGAGCATGGTGCTCTTATACAGAATCTGCTGATGAGCGGTCTTCCTGCTCAGAAGTTGCTCGAAGGGGACGTCAGTTTGCCGGAGGTGGTGAAGAGGATGATCGCCGAAGAGCAGATGTTGATGGAGCAGGGGAAGAGCAACAACGGAGTGGAGAAGTCGACGGCGGAGACGACGAGTCCAGCGAACTCGGTGATCCTGCTGAAGGCCGAATCCGATATGGAGACGGAGGATTCCACCTCTAATGTGATACTGAAGATTCCGTCCTTTAAGCCGACGAGTAGCAAAAACGGTGATGCCTTTCGAGGGGGCCATCTGGAGACGCAGCTGCTTGTCTCTCCTCCTGTCACCACCAGCGAATCGGGATCACCACCAATACTTCCCGGAAAAGGGATGACCTTGAAGGACGTTAAGGACGTCATCGCGAAGAGCATCAGCCAGAAGTTCCAGCAGAGTCCGGAGCCGGCGCTGCGGCATCATCCCGCTTCGATCATCGACATGGAGTACAAGAGGTATACGCCGCCTCTCGGAGGCATCTCGGTTATCAAgacgcagcagcagcaacagcaggaGATAGCGTCCAGGTCGCAGTACCAACCGCAGGtgtcgcagcagcagcagcagcaacagcagaagcagcagcagcagcaacaacagcagAGCTCGGGTCAAGGACAGGTGGGGGGGTCATCTGGTGGAGGCAAAGGGACACGTCCGAAGCGGGGCAAATACAGGAACTACGATCGCGACAGTCTCGTGGAGGCGGTGAGGGCGGTGCAGAGGGGCGAGATGTCCGTTCATCGAGCCGGAAGTTACTACGGCGTTCCACATTCGACCCTGGAGTACAAGGTGAAGGAGAGGCATCTGATGAGGCCTCGCAAAAGAGACCCGAAACCGAATCCCGTCGACGAGAAGATCGCATCCCTGAAGCAGAACGACATCCGGAATGCTGCAGAATGCAAGCTGAAAACGCAGGCAACCATAAAAGCACCTCAAAAGTACCCGCCCACCTCGCCTAACGGTCTGAAATTGCCTATCTACGAGAACATGACGCCCATCGGTTACAACACGGCGCCATTTCCCTTCTGGCCACCACCCGGTTACCATCCTCTCTCGATGGACTACGCCAGATCCTCCACGTCCACCGCCTATCCGCAGAGTCCGGAGCAGTTCTTCGCCTCGCAGATGATGCAGAAGCTGCACGAGGATTCCAGGGCGAACGCAAACGCCCCCGGCGGACAGCAGCTCGCCAAAAGCGCCCGACAGATGGCGGAATCCCTGCTCGACGGAGGCGGATCGAACGGCTTCCTCGACGGCATCATCCGCTCCAGCCTCGAATCCGGCGTCCCCGTCGGCGGTGGAGACGATCGCAAAGAGGACCTGAAGAACGTCGCCCCCGAGAACATGTCCAACAAGGCCCTCCTCGATCAGTTGTGTCGCAACAGCCGCCTCCCGCCGCTCACCAAACCGGAACCGAGCAGCAGTTCCGGCGACGACGATCGGAAAGAGGACACGAATTCGCGCGATTCCGCAGGGATCCACACCATCGAGCTCTCCAACGACTCCTCCCCCAGGTCCCCAGCAGGATCGCAGGACCACGACACCCACAACGAGATCAAACCGCCCCCGGGTCGCATCTATCTCAAGCAGGAGCTCACCAAACCGGAAAACCTCAAACCGGAAATGCTTGTCCGATACAGCAGATCCATCCTCCAGCAGCAGGAGGACATCCGCAACAACGGCACCGTCGAAGGCAGCAATTCCGAGTCGGACGCCGCGCAGGACTGA
- Protein Sequence
- MGRRKWKLYQDSMQRNYLQPLNNNVRKNEKYQKQEQQQQEVEDEERRGAKEHFEEADVELGEELARRRRSSTTATTTTTAPRERATRGDGEEEQQEEEEIEEAAVVAAKTAVAVASGRGEEEEDDEDEEEVEEEEGEVTATAASAKTALAKEQEQDLAAAAAEAAALAATATASPTTGTTTTTTAADCRRDSDDVTDADDEDKLKDWTPQSKCYFCVDGKLDEHNNHGGLSPHQSDSDSSDSRSDLEAPPTLTPTGTASTTASAAAAASLLNNLNSLNHPNSRNMTALESVTSIAAIATVAAMTGNGGPGGGGGGVGGHHQHHQPHHHHPHLSFYPPNLLSQNWFHLTNLARNFHANSNDTEKVAAAATAAAAAAAAAAAAAASASAGEQPLDLSSKGTTVTNNNNNTNNTIITNSNNNAASNNNSINNNNNAIVAASVDKLNVNARLSSLDNKQIFNSDFRAKPRMSAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSASAAATNLSKLDDEEAMDEDKELSGAEEEKEVERALQRPLLSMDDLLSNLENSEAMKMLLRKSKDQQLPPGVALLQQQQQQHNLNMNLHQQESFAEHGALIQNLLMSGLPAQKLLEGDVSLPEVVKRMIAEEQMLMEQGKSNNGVEKSTAETTSPANSVILLKAESDMETEDSTSNVILKIPSFKPTSSKNGDAFRGGHLETQLLVSPPVTTSESGSPPILPGKGMTLKDVKDVIAKSISQKFQQSPEPALRHHPASIIDMEYKRYTPPLGGISVIKTQQQQQQEIASRSQYQPQVSQQQQQQQQKQQQQQQQQSSGQGQVGGSSGGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNAAECKLKTQATIKAPQKYPPTSPNGLKLPIYENMTPIGYNTAPFPFWPPPGYHPLSMDYARSSTSTAYPQSPEQFFASQMMQKLHEDSRANANAPGGQQLAKSARQMAESLLDGGGSNGFLDGIIRSSLESGVPVGGGDDRKEDLKNVAPENMSNKALLDQLCRNSRLPPLTKPEPSSSSGDDDRKEDTNSRDSAGIHTIELSNDSSPRSPAGSQDHDTHNEIKPPPGRIYLKQELTKPENLKPEMLVRYSRSILQQQEDIRNNGTVEGSNSESDAAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -