Basic Information

Insect: Netelia virgata
Gene Symbol: stc
Assembly: GCA_951802705.1
Location: OX637867.1:32639611-32644283[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 2e+04 -4.4 1.6 15 19 539 543 538 543 0.81

2 15 0.17 1.7e+03 -0.7 0.3 4 10 572 578 571 578 0.94

3 15 2.7e-06 0.027 14.7 10.4 3 18 588 603 587 604 0.94

4 15 2.7e-06 0.028 14.6 14.5 1 18 640 657 640 658 0.91

5 15 0.77 7.9e+03 -2.8 0.3 1 4 667 670 667 671 0.91

6 15 2 2e+04 -4.4 1.6 6 10 686 690 686 690 0.97

7 15 2.3e-09 2.3e-05 24.5 12.8 1 19 696 714 696 714 0.97

8 15 8.8e-06 0.089 13.0 13.5 4 18 761 775 754 776 0.86

9 15 2 2e+04 -4.7 1.6 5 10 805 810 805 810 0.90

10 15 0.0054 55 4.1 11.9 1 11 816 826 816 838 0.88

11 15 1.9e-07 0.002 18.3 19.5 1 19 843 861 843 861 0.98

12 15 0.37 3.8e+03 -1.8 0.6 5 10 889 894 887 894 0.95

13 15 2 2e+04 -8.4 11.3 10 19 908 918 897 918 0.71

14 15 2.2e-07 0.0022 18.1 12.7 1 16 954 969 954 980 0.84

15 15 8e-06 0.082 13.1 13.6 1 19 986 1005 986 1005 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	2e+04	-4.4	1.6	15	19	539	543	538	543	0.81
2	15	0.17	1.7e+03	-0.7	0.3	4	10	572	578	571	578	0.94
3	15	2.7e-06	0.027	14.7	10.4	3	18	588	603	587	604	0.94
4	15	2.7e-06	0.028	14.6	14.5	1	18	640	657	640	658	0.91
5	15	0.77	7.9e+03	-2.8	0.3	1	4	667	670	667	671	0.91
6	15	2	2e+04	-4.4	1.6	6	10	686	690	686	690	0.97
7	15	2.3e-09	2.3e-05	24.5	12.8	1	19	696	714	696	714	0.97
8	15	8.8e-06	0.089	13.0	13.5	4	18	761	775	754	776	0.86
9	15	2	2e+04	-4.7	1.6	5	10	805	810	805	810	0.90
10	15	0.0054	55	4.1	11.9	1	11	816	826	816	838	0.88
11	15	1.9e-07	0.002	18.3	19.5	1	19	843	861	843	861	0.98
12	15	0.37	3.8e+03	-1.8	0.6	5	10	889	894	887	894	0.95
13	15	2	2e+04	-8.4	11.3	10	19	908	918	897	918	0.71
14	15	2.2e-07	0.0022	18.1	12.7	1	16	954	969	954	980	0.84
15	15	8e-06	0.082	13.1	13.6	1	19	986	1005	986	1005	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGGTCGGATCACCCTGGTCCACCCGACGATCCAAATTTCTATTTGTTAGCTCATGCGATAAATGCAGCTGCGAATCCACGCACCTGGGACTACTATTCCACACCTGAAAACGGGTCTTATCCTCACAGTTCGATGGGCTTATACGCTCAAAACAATCTTCCAAATGCTGCGACGAATCAGGGATTTCAAAGTGCCACTTATCAGGAGGGAATTTTTGTACCACCTATTCATGATAATGCTGTCTCGATTGTCGATGACCGGCCATGTTTCTTTGAGAACAATAGACCGTCGCAAAAACTTCAACCCTACAGTGTTCGCGGCGTCAATTACGTCCAAGACGAAAGGGATGCGAGTAAAACGAGATACTCGAGTCCGAAGCGTGAAACAACTCTGGCTCAGTATTCGAATCTTCATCCAGGTGCGAGCGAATTCGTACCGACAACGAAGAATGTACAAAAGACTTCGTCCGTGCCGTCGTGCAACGGAACCGAGGGTCAATACAACGACGGTATGACCGAAAATTCTCAGGGTTCATCTTCGTCTCATATCTTCTTCAGTGATAATAGAAATCGTGCTAACGACCGACGCTACGATGCTACCAAGGCGGGCAATTCTTATCGCGGGTCTTCGTACAAATCTCAGCGTTCTCGTAATTACGAACAGACGTACAGTGGACAATGGGGAGGTGGTGGCAACGATTCCGGCTCGATGAATCAAGACACCTCATCGACAAACGTTCAAACGGACGAGAATGCCTACAGAAGCAATAACAAAAGTCAGAAAACTCGCAGTTATGGTAGATTTCAGAATGATAGATACGTTAACAATCGTCAGCAacagaataatgaaaaatctcgatcggatagaaaaaaaatgcaagtcGATGCTTGGCAAAATCTTGGCGAATCTCACAGAGACGCAGTGACAACAAGTAACGAGGACAATCGTGAAAACACTAATCAGCCTGGGCAGCACAATAATCGTGGCAAATGGCCGAGAAACGATAGACGATATGACAGAAATGATCGATATCAATCGGGCAATCGTCagttaaacgaaaaatctcatCAACCGACGAACGATTATGATGAGCAGCAGATTTACGATTCAACAACATCGGGCCATTCATCAACGGGAGGgcgacgagaaatttcacaagGGTACAGAAACGATCGTGGACGTGGTAAGCATAGAAATGgttcgacgaatttcgatGTCAGCGGACATTCTTATTACGATCACGAGGGACACGAAGATAATCACGAGAGTACAAGATTTGAGAGATCACGGGATGATGGGAAGAAATCGAGAGATCCGCGGGACGATGAACCGCAAAATTGGCGACAGAAGGATAATAAAGCGCCGCATCGCAGTGTGGTGACAAAGagaaataacaagaaaattgaattcgATGACGATGCGAGTCAGAGAGAACGATTGACCGAACTATTGAATCAAGGTCACTTAGAGTGTCTCATTTGTTGTGACTATATAAGGCAAAATGATCCGGTTTGGTGCTGTAACAATTGTTATCACGTGCTGCATCTCAAGTGTTTGAAGAAATGGGCACATTCATCACAAGACGAGAACGGTTGGCGCTGTCCAGCCTGCCAAAACGTGAGCTTGACTGTTCCCGAGATTTATCACTGTTTCTGTGGCAAAGCGCGAGCTCCCGAGTGGAATCGTCGCGACGTTGCTCATTCTTGTGGCGAAATTTGCGCTCGTCTTAGAGCAAAGAATAATTGCATTCACAAATGCACCTTGTTCTGTCATCCGGGTGCATGTCCTGAGTGCAATGCAATGGTGACAAGACACTGTGGTTGCGGAAGAACTTCACAGAGCCTCAAATGCAGTACAACGACATTAGTCGTTTGCGACGCTATTTGCGAAAAGGACCTCAATTGCAAAATTCACAAATGTGAAAAAACTTGCCATCACGGTGATTGTGGAGTTTGCGAAAAGACTTTACATCAAGaATGTTACTGCGGCAAACACGCGCGAGACGTAACTTGCAACGCAGATGTGGCATCGACCTACGGTTGCGAGGAGATATGCGATAAATTACTCGAGTGTGGCAATCATCGATGCAAAGAAATGTGCCATCCTGGCAGTTGCGATTCGTGTACACTGCAGCCCGCGATGGTGACGCACTGTTGCTGTGGACAAACGTCTCTGACCATCGCCCgtgaaaattgtctcgatcCAATCCCAACGTGTGACAAAATGTGTTCCAAAAAGTATAAATGTGGTCAACCGagCGATCCTCATACCTGCAAAGCTGATTGTCATCCAGGCGATTGTCCAGAGTGCGAGTTGACGACTAAGGTCCGTTGCCGTTGTGGCAACATGGACCGCGAAATCGCTTGCAAAGAATTACGAACCAAAGCTGACGACGCACGTTGTGAAAAGAGATGCACGAAAAAACGATCATGCGGCAAGCACAAGTGCAATCAGCCTTGTTGCATCGATATCGAGCACATATGCCCTATGCCGTGCTCGAAATCACTTAATTGCGGCAGACATCGATGCCAATTATGCTGCCACAAAGGTAGATGCCAGCCTTGTCAGCAAATGAGCTTCGACGAGTTGCACTGCGAATGCGGCTCCTCGGTGATTTATCCCCCGGTGCCATGTGGTACGAGACGACCCACTTGCAATCGTCCGTGTACTCGTCAACACTCGTGCGGTCACGAGGTACTTCACAATTGTCACAGCGATCCAACATGTCCACCTTGCACGGTTCTTACACAGCGATGGTGTTACGGCAAGCATGAGCTAAGAAAAGCCGTGCCTTGTCACGTCAATGAAATATCCTGTGGCCTACCATGTAACAAACCTATCTCGTGCGGTAGACACAAGTGTATAACGCTTTGTCATTCTGGTCCTTGTGAGAAAGCCAGTCAGGTATGCACACAGCCGTGCACAACACCGCGGGAAATGTGCGGACACATTTGTGCCGCACCGTGTCACGAGGGAAAATGTCCGGACACTCCTTGTAAGGAAATGGTCAAGGTTACTTGTACCTGCGGTCATAGAAGCATGACGCGTCCCTGTGCAGAAAATTCTCGCGACTTTCAGAGAATAGCGAGTGGCATATTGGCGAGTAAAATGGCTGATATGCAACTCGGACATTCGGTGGATCTGGAGGAGGTCTTCGGTCAgggagcaaaaaaacaaaatcaattgaAGACACTCGAGTGCAACGATGAGTGTAAGATAATAGCGAGAAATCGGAGACTCGCACTTGGTCTACAGATCGTAAATCCCGATTTCAGCGGTAAACTAATGCCCCGTTATACCGAATCGATGAAACAATGGGCCAAGAAAGATCCTCACTTTTGCCAAATGGTAcatgacagactgacagaatTGGTACAATTGACAAAAACGTCGAAACCAAAATCGCGCAGTTACTCGTTCGACAGCATGAATCGTGACAAGCGCAATTTCGTACACGAGAGCTGTGAGCATTTCGGTTGTAAGAGTCAAGCTTACGATCAGGAACCCAAGAGAAATGTTGTTGCAACAGCGTTTAAAGATAAGTGTTGGCTGCCGAGCTACAGCTTATTGGAAATAGTGCAACGAGAAAATGGTCAGCGGAAAGTGCCTGGACCGATGCTCAATACGACAAAACCGAAATCTACTCAACGatCATCGGAAGTGCTATCCTCAACTGCCAGAGCGAGTCAGAAGCTTCAGCCAGCAGCTTCGTCCTCAGCCTCCAAGTCACCGGAGCCtgaaattgattattttgattatcCAAATGGCAAAGCTAACAAATGGGCCAACATTTAA
Protein Sequence: MATWDGSDHPGPPDDPNFYLLAHAINAAANPRTWDYYSTPENGSYPHSSMGLYAQNNLPNAATNQGFQSATYQEGIFVPPIHDNAVSIVDDRPCFFENNRPSQKLQPYSVRGVNYVQDERDASKTRYSSPKRETTLAQYSNLHPGASEFVPTTKNVQKTSSVPSCNGTEGQYNDGMTENSQGSSSSHIFFSDNRNRANDRRYDATKAGNSYRGSSYKSQRSRNYEQTYSGQWGGGGNDSGSMNQDTSSTNVQTDENAYRSNNKSQKTRSYGRFQNDRYVNNRQQQNNEKSRSDRKKMQVDAWQNLGESHRDAVTTSNEDNRENTNQPGQHNNRGKWPRNDRRYDRNDRYQSGNRQLNEKSHQPTNDYDEQQIYDSTTSGHSSTGGRREISQGYRNDRGRGKHRNGSTNFDVSGHSYYDHEGHEDNHESTRFERSRDDGKKSRDPRDDEPQNWRQKDNKAPHRSVVTKRNNKKIEFDDDASQRERLTELLNQGHLECLICCDYIRQNDPVWCCNNCYHVLHLKCLKKWAHSSQDENGWRCPACQNVSLTVPEIYHCFCGKARAPEWNRRDVAHSCGEICARLRAKNNCIHKCTLFCHPGACPECNAMVTRHCGCGRTSQSLKCSTTTLVVCDAICEKDLNCKIHKCEKTCHHGDCGVCEKTLHQECYCGKHARDVTCNADVASTYGCEEICDKLLECGNHRCKEMCHPGSCDSCTLQPAMVTHCCCGQTSLTIARENCLDPIPTCDKMCSKKYKCGQPSDPHTCKADCHPGDCPECELTTKVRCRCGNMDREIACKELRTKADDARCEKRCTKKRSCGKHKCNQPCCIDIEHICPMPCSKSLNCGRHRCQLCCHKGRCQPCQQMSFDELHCECGSSVIYPPVPCGTRRPTCNRPCTRQHSCGHEVLHNCHSDPTCPPCTVLTQRWCYGKHELRKAVPCHVNEISCGLPCNKPISCGRHKCITLCHSGPCEKASQVCTQPCTTPREMCGHICAAPCHEGKCPDTPCKEMVKVTCTCGHRSMTRPCAENSRDFQRIASGILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIARNRRLALGLQIVNPDFSGKLMPRYTESMKQWAKKDPHFCQMVHDRLTELVQLTKTSKPKSRSYSFDSMNRDKRNFVHESCEHFGCKSQAYDQEPKRNVVATAFKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKPKSTQRSSEVLSSTARASQKLQPAASSSASKSPEPEIDYFDYPNGKANKWANI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057318;
90% Identity: iTF_01056474;
80% Identity: -