Nvir005308.1
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_951802705.1
- Location
- OX637864.1:21771111-21776044[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.76 1.5e+04 -4.3 1.0 92 98 410 416 357 442 0.49 2 2 3.6e-100 7.4e-96 320.4 7.6 2 218 739 948 738 948 0.91
Sequence Information
- Coding Sequence
- atGGAATCGTCTTCGGCCCGGGAAAGTCCTCTCGTCGTGGCTCGAGAAGATTTTAACTCAAATGAGGAACATAAGCTCCGTTCGCCGCCGTCAGAGCCGACGCTGCCCGTGGAAGTTGTGCCAAACGCTCGAGACAACGACAAGTCGGATGGAAAAATCACAGAGCCGGATACCTCGGGCTTGGAGATCGGTTCGAGCCTTGGCAACGAACTCAAAGAAACTCCGATTGTTCCGCAAATTGAAAGAGGACCGGGATGTACGTCGGACGTGAGAGAGAATgttgaaaattctcgagaaaCGCTGGCACCGAGTCGAACGTTCGATTCGGACGGGAACAAGGTAGTTGCGGGGAACGACCGTGAAAACGTCGAGAGCGCGATGTGCGACGACTCTTTTACCGACGAGGCACTTGCGGCGTCGCCATCGAACGAGTCTACACCGTCGAGAAAGAGGCCGGCTGCTGAATTTTTGCCGATAAACGCAGAAATGAAGAGAATCGGCGTCGAGATATCCGAGGAGCACGCTAAACAGTTGAAGAACGACATTAGGAGGCTATCGCCCGTTCTGGTTAGTTTGCGAGAGCGTACACTCGGCGAGATATCGTTGACCTCGGATTCCGGTCTCTTCGAGGACGAAGATCAGATATTGAGACTCGAGATAAACGAGGAAAGCATCGAGTCCGATGTGCCCTTAATTCCGGAAGAGCCCGAGGAAAATCGTATCGCGATACAGCCGGAGGTTCGATCGAGGGTGGCTGACTCGACGCCCGAGGAAGCTTCGGTTGGTGCGAGCTGCGAAGCTTCGATGGACACAGCGAGTTCCGACGAattatcctcgtcgtcgtcgtcgtcgtcgtcgatgacGATCGAGACAAACGAGAGGTTGAAGAACGTCGAGTCCACTAGACCGCGTTCCCACGAATTTGATCTCGCCGTTTCTCCTTCACCCACGATGCTCGTCGTCGCGAGCCCAGCGAGCGAGCGGTCGAAAGCTCAGCGCGAACTCATGATAGTTTTGTCGCGCGTTGACGACGGCGATGTGGAGATCGGTAGCCCGAGATCGAAGACATCGACGAATAAAGAAACGAGTAATCGGAGAACCGATAGCGACGAAAGTGTCGCTGGTGCAGCGAACGAGACGATTAACGAGAGGATCGTCGCGAGGGCCGACACGTCGGTCATCGACGACGAATGCGGCAAGAATTTGGCGTCGAGCGTcgtcgaatcgtcgacgatgGAGGATTTAAATGCGAACGATAAGAACGAAGGGGAACAACAGCAGAGGGAAAAATTGCTCGTAAAGGAAGCTCAGGCTACGAGCTCGGCTTCTCCGGTGTTGCTCGATAACATTTATCTCTCGTCAAAGTATCACGACAACGATCAGCTGACTCGCAAGAGTCCAAAAGTCATAATCGAGAGAACGTTGGAGAATGGTCAATCGCCGAGGAGCGAGGGGACTCCGATGACGGTGGAACGGATCGATCTCGACTGCGTTCGAAGAACGTCGGAAGACGATCTCATCGAGAACGACGGGGACGAGGACGTCTCGTCGAGCGATCCACTGGCGATCAGTGACGAGACCCTGCGAGCGATCACCCCTGACGAGGTCACCGATGTCCCGAGTGACCTTCAGGAGTCGCTCGACACGGAGACCGAGACCGAGACCGGCTCGGACAATTCCGAGCTCGTTTCCATCGCCTCGATAAATCTCGACTGCGTCGAGCCGGATAACGGGGAGCCCTCGGCATGTCCGGAAACGGATTCGATAGTGTCTGACGATGTACAGACCGAGGTGATAACGAGACTGGAGCCGGAGAGACCCGAGCCATTTACCGAAGACTCTGCCGAGAGTTTAGCGCTTGCTACAGGAGCCAGGGACGAGGTACGCTCGGACGGAAGCGATTCCGGGCTCGGCAGTGAGATCCCCGGCGATCCTGGACCCGCTCCCGCCCCCGAGAGCGACTCCGAGACctcttttctcgatcgaatacCCGACGATATACTCTCGGACAAGGACAAAGCAGTGAATCCACTGGAGGCCTTTGTACCGGACGCTGACACTTCGGAGACTCAGCAACAGACTCAGCATCAGCAGCAACAAATACCACTGCCGAGCTTTCCGTCTCCTCCTAAGAGCAGCCTCAAGCGAAGGCTCACCGATTGTATGGAGGGTGAACCTAGTCCGAAGAGACCCAACGCCGATGATTCGATCAGAAAGAAACGCAACATACAATTCGACGCTGTCACGGTTTATTACTTTCCGAGAGCTCAAGGCTTCACGTGCGTACCTTCGCAGGGTGGCAGTACATTGGGAATGAGCGCTACGCACACGCACGCTGAGAGATTTTCACTGACGGAACACGCTGCCGAGCAAAGACGAATTCATCGGGCCAGACTCGCGCAATTAAGATCGGAACGCGCCGCAAATTGCGTAACGGAGGCCGCGTCAAGCTCGGAGGATCCGAGCGACGATACCGACGAAGAGCCCAGCGATACCGAAGAGTTGGATATCGATAgttattattttctccaaCCTGTACCGACGTGGCAGCGAAGGGCTTTGCTGAGAGCCGCGGGCGTTAGAAGAATAGACGCGATTGAAAAAGACGATTGTCGAGACATAAGGGCGAGCAGAGAGCACTGTGGTTGCGGATGCAAGGGTTACTGCGATCCTGAGAGTTGTCCCTGCTCGAGAGCAAACGTGAAATGCCAGGTTGATCGAGCTGGTTTTCCCTGTGGTTGTTCACGCGATGGCTGTGCCAACAGTTCCGGCCGTATCGAGTTCAATCCCGTTCGGGTGCGTACTCACTTCATTCACACGCTGATGCGTCTTCAACTGGAGAAGAAGCAGCGAGACGAGGATCGTACGGACCACGATCTATTGATTAACAGTCAGGTCGGACGTGGTCCAATGCGAGAAGTGAGTGGCCTGATAGGAACTGGCCTAGGTCCTATGGAACATCCGAACGTAATAACCGGTGATCCAGTATCTTGCATAAACGGGGGTGGTTTTACGACCCTTCACTATGAGACTCACGATCCGACAGCCGCGACGTGTCAATCGAGTGTTGTACACGCCGGAAGAGAGGACAGTCTAGATCTCTACGCGATAAGGGACGATTGTTATCCCAGCGAACAGGATGTCGAGAACGGACAAAATTCTCAGAACAAATTACACCCCGAATTCGGACAAGCCTTTCAAACGTTTCCCGGTCAACAGGTGGGCGTGGCTTTTCCACAAAGCTCTTATCAGGATTATCAAGGATATCAGACGCTCGCATCGACGTCGAGATCACAATTTCAACCCCAGTTTCAAGGGATGCCACCCGCGAACGCGGCTTTTTCGCACTACTCTTACGGACAAGACGCGAGTGTCATGCAGACAGCTTCGTGTCAACCCCACTCGGCGGTTTCCTCGCATCATCCCTCGGTCTACGAGACAGCCTTTACCCAGGAAGATCCGAGTGGATCCCAGCAACAATACACAAATCTCAATTCCGTACAACCGATGAACGCCGTCGTTCAACAAATGGGCAAACTCGAGCCGTTCTCCGAATTATTAGCCGGCAGATACTCTTACTACGGTGAGGTCGAGCCTCAGCCTATCGGTGGTTATCACAATAATGGTGGGGCGAAAATCGAGCCGGAGAAAAATCAGGTGCTCGAACAACAAACGGTCGAAGCTACCACGGACGATTGCGACGAGAATTTTGGTGAAATCATCAAGAAATCTATGGTCGAGACCGTTTCGGCTTAA
- Protein Sequence
- MESSSARESPLVVAREDFNSNEEHKLRSPPSEPTLPVEVVPNARDNDKSDGKITEPDTSGLEIGSSLGNELKETPIVPQIERGPGCTSDVRENVENSRETLAPSRTFDSDGNKVVAGNDRENVESAMCDDSFTDEALAASPSNESTPSRKRPAAEFLPINAEMKRIGVEISEEHAKQLKNDIRRLSPVLVSLRERTLGEISLTSDSGLFEDEDQILRLEINEESIESDVPLIPEEPEENRIAIQPEVRSRVADSTPEEASVGASCEASMDTASSDELSSSSSSSSSMTIETNERLKNVESTRPRSHEFDLAVSPSPTMLVVASPASERSKAQRELMIVLSRVDDGDVEIGSPRSKTSTNKETSNRRTDSDESVAGAANETINERIVARADTSVIDDECGKNLASSVVESSTMEDLNANDKNEGEQQQREKLLVKEAQATSSASPVLLDNIYLSSKYHDNDQLTRKSPKVIIERTLENGQSPRSEGTPMTVERIDLDCVRRTSEDDLIENDGDEDVSSSDPLAISDETLRAITPDEVTDVPSDLQESLDTETETETGSDNSELVSIASINLDCVEPDNGEPSACPETDSIVSDDVQTEVITRLEPERPEPFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKDKAVNPLEAFVPDADTSETQQQTQHQQQQIPLPSFPSPPKSSLKRRLTDCMEGEPSPKRPNADDSIRKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLTEHAAEQRRIHRARLAQLRSERAANCVTEAASSSEDPSDDTDEEPSDTEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAIEKDDCRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLQLEKKQRDEDRTDHDLLINSQVGRGPMREVSGLIGTGLGPMEHPNVITGDPVSCINGGGFTTLHYETHDPTAATCQSSVVHAGREDSLDLYAIRDDCYPSEQDVENGQNSQNKLHPEFGQAFQTFPGQQVGVAFPQSSYQDYQGYQTLASTSRSQFQPQFQGMPPANAAFSHYSYGQDASVMQTASCQPHSAVSSHHPSVYETAFTQEDPSGSQQQYTNLNSVQPMNAVVQQMGKLEPFSELLAGRYSYYGEVEPQPIGGYHNNGGAKIEPEKNQVLEQQTVEATTDDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055981;
- 90% Identity
- -
- 80% Identity
- -