Nvir010476.2
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- ttk
- Assembly
- GCA_951802705.1
- Location
- OX637865.1:35247095-35248747[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-10 7.2e-07 29.0 0.0 8 41 342 375 337 378 0.92
Sequence Information
- Coding Sequence
- ATGGGAGCCTCGGATCGTTACTGCCTACGCTGGAACAATCaccaacaaaattttctcACCGTAATGGACGATCTGTTCGAAAATCAGACTCTGACGGATGTGACGCTCGGTGTCGAGGATGGGCGTTTTCTCAAGTGtcacaaagtcatattggcgACTTGCTCGTCGTACTTTCGTTCGCTCTTCGTAAACGTACCGTGCAAACATCCGATAGTCGTTCTCAAAGATGTCAAGTATACGGAAATCAAGGCTATATTGGATTTTATGTACAAGGGCGAGGTAAGCGTGGCGCGAGACGAGATGACGGCTCTCTTGAAAGTCGCCGAGTTGTTGAAGGTCAAGGGTCTCATTGCCGGTAACGAATTGTCATCGGAAACTGCGATAGGATCGCCTCCAGGAGCGATCTGTAGCACGAGCAGCAGCCATCCTGGTGCTAgcgttcgaaattcgaacCATTATCGCGCCAATTCCGCGCGTCCTCATTCGACGAGTTCGCCATTTTGCGGTAGTGTTAAATCACCGGGTGATCAAGATGGCGTCGAGGCTAAATTTTCGATACCATCGTGGGCCTCGTCTCAAGCTTTGccactcgacgaaaaaaaacctgcaGGCTCTTTGACAAATTTCAATCCTTTCCTGGTGGCCAGACAATCTTTACTTTATCCCCAGTGCGACAACGCCTGCGAAGCTACTACCGATATTAGAAATATTTCTGGCAACAGTGTCGCTATACTGAGAACCATTCTTCATCAAGATCGCGACGATGGCTCGTGTCGGAATCGTAGTAACGGATCGGCGAACAACGAGTCCGATGAGAGACGAAGCAGTATGGATTTGTCTCATGGACCTCGAGCTCAAAGCCCTTACGAGACGGACGCTTCGTTGATGGACGATGACGAGAGGAGACCGTTTACTCAATCGTTCACCGAAGACGCAAAATCCGCAGCAACGACGAGTTACTCATCGTCCCAAAAGCTGGAGGGCAAACGTTACAAGAAGTACACGAGAAATGATGTATGGAACGCGATCGAGGCTGTTAAGGGAGGCTTAAGCGCGAATAAAGCCGCCGAGTTGTTCAACGTACCATCGAGAACCCTGTACGACAAGATTAAAAAACTCGGCATTGCTGCCGCGAAACATGGCAGACGCGGCGAAAATGTTAGAGCTGCCGGTTTTTCATACGAGATCGGTAACGTGAACAGAAGCTTATCTGAAAACGTATCGAACAAAACGGACGAGAGTAACAGCGCGACGCTGGAAAATCCTGCCTCGATCGTTGCCACGACGATCGCGGAGATTCCCGATGAGGAGACCGATCGCGCGATGACGTCGgacgtcgatcgaacgagcgCGAGTCCACCGATTTGCCTCGATAATTCTACCTTGCGATCTACGGAAGAATCATCATTTGCCGATAACGAGACCGAGGCCGAGGATCTTACGGTGAGTCGTAGAACCAACGTCGGTGTTTTAATTTCaccgaatatcgcgattaagTAA
- Protein Sequence
- MGASDRYCLRWNNHQQNFLTVMDDLFENQTLTDVTLGVEDGRFLKCHKVILATCSSYFRSLFVNVPCKHPIVVLKDVKYTEIKAILDFMYKGEVSVARDEMTALLKVAELLKVKGLIAGNELSSETAIGSPPGAICSTSSSHPGASVRNSNHYRANSARPHSTSSPFCGSVKSPGDQDGVEAKFSIPSWASSQALPLDEKKPAGSLTNFNPFLVARQSLLYPQCDNACEATTDIRNISGNSVAILRTILHQDRDDGSCRNRSNGSANNESDERRSSMDLSHGPRAQSPYETDASLMDDDERRPFTQSFTEDAKSAATTSYSSSQKLEGKRYKKYTRNDVWNAIEAVKGGLSANKAAELFNVPSRTLYDKIKKLGIAAAKHGRRGENVRAAGFSYEIGNVNRSLSENVSNKTDESNSATLENPASIVATTIAEIPDEETDRAMTSDVDRTSASPPICLDNSTLRSTEESSFADNETEAEDLTVSRRTNVGVLISPNIAIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057768; iTF_01056170; iTF_01055906; iTF_01056723; iTF_01057009;
- 90% Identity
- iTF_01057768; iTF_01056170; iTF_01055906; iTF_01056723; iTF_01057009;
- 80% Identity
- iTF_01057768;