Nvir004626.2
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- ct
- Assembly
- GCA_951802705.1
- Location
- OX637864.1:10843792-10865840[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-27 6e-24 84.0 0.0 2 72 541 612 540 617 0.95 2 3 2.1e-32 1.1e-28 99.2 0.0 2 77 950 1026 949 1028 0.96 3 3 6.7e-30 3.4e-26 91.2 0.0 3 76 1190 1264 1188 1267 0.95
Sequence Information
- Coding Sequence
- ATGCATTCTCGCCTCAACGACGATACGACCGATTCCGGGGGTCAATTGCTCGATGAGATCTCTAGGTTACAGCAGAGCCTGCAGCGTCTACAGGAAACGAGCTCGCAGGCTACGTCGCGCCTCGAGGAGGAGCTCGAGGCACGACGACAGCACATCAGCCGTTTGGAGAGCAAACTCGAGCGTCAGCGTGACTACGACGATATCAAGCGTGAGATAAGCGTTTTGAGATCCGTCGATCTGTCGCAAATACCGACGGGCGAGCCCGGCAAGAGCCTCGAACATCTCCTAATGGAACGGTCGAAGGCTCTACAGCAAGCCGAGACACTCAAACCACCGACTACTCCCGATGCTCTCGGTGGACTAGCCTCACCCCTTCAGCGCGCCGCGACCGCTTCACCCCAGCACGCTGTTGGTGGTGTAGGTGGTGCTGCGAGTGTCGTTACTGGTGGGAGTGCTGCGCCGCCACCCGCGTCACTCATCTCCTCTTCCCAACAAGCGATCCCGACGCGCTCGACCCCGACACCCTCGTCGGCTACCTCGACCGCCTCGAGTCTCCTATTCCCACCACCTCTCCAGAACGTCGAGACCTTTGGCTCTTTCCTCGGTGAGGAGATCGTTGCTAACTGGAGGCGTTCCCTGGAGAGAACGATCATgagccagcagcagcagcaacagcaacagcaacagcaacagcaacatcagCATCAagcacaacaacaacaacaacaacaacaacaacaacacctCCCGCAGCAACAATCGCACCAACAGCAACAACCATTACCGTCACAATCACAAACCCAAACTCTCTCCCATCTCCAGCAATCACAGCCCGTTGCTGCCGCTGTCGCGGTTCACCAAGCGTTGCAACAGCAACATcaacaacatcaacaacaacaacaacatcaacaacagcaacaacaacaacaacaacagcaacaacaacagaccATGCACTCGTTGCATCAATCAACGACAACGAACCTAAATCACCTAAATCACCTTCCATCACCAACAGATAATCCATCGTCGTCGGCCTCGTTAACGAACACACCGGCCAAATCGAATACGCCGCAATTGGGCGGTAGCGGTGTAATGAGCGCCGGATGTCTGGAAGCTACGGAAAAGGCACCAACGCCGATACCTGGCCACGAAACACCCGCGCCACCGACGCCATCGTCGACCGTCGCTCTCACCTCACCCTTGGCACCGATGATCGTCAGTGCTCTTCAACCATCGCAAtcggcaacgacgacgacgaccacgacgatCCTCGACACGTTGCACACGAGCAACAACTGCGGCACGAACGGTCCGAGCATAGGAATGTTGCCCGGTATAATGCCAACGTCGCTTCCGCCAAAGAGCCCGCAGGAGGAATCCTGtcacaataataacaacagcCATCATCTTGCCAACAACAATATCGGTGGTCTCAGTGTACTGGACACCCTCAAGAACCCTTATCGCTTCGACGATAGAACGCATCCGTTCAGATTCGGTGACGAATTTGGGGCTGCCGGTATGGTCGGTAGACTCGGGGAATCGCTCATACCCAAGGGCGATCCGATGGAAGCGAGACTCCAAGAGATGTTGCGCTACAACATGGACAAATATGCCTCCCAAAATCTCGATACGCTTCACATAGCGAGACGGGTACGGGAATTATTGTCGATACACAACATCGGACAGAGGCTCTTCGCGAAATACGTACTGGGACTTAGCCAGGGTACCGTCAGCGAGCTTCtgagcaaacccaaaccgtgGGACAAACTCACGGAGAAGGGTCGCGACAGCTACAGGAAGATGCACGGATGGGCTTGCGACGAAAACGCCGTGATGCTACTCAAGTCGCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCAACATTTGGACGTGGTCCACAGGACGGCGGCCCGCCGGACATGAGCGACGAGAGACTAGCGCATATACTCTCGGAATCGGGACATCTGCAGATGAGCAGGGGTGAGCACGACACGTCGAATGACGCGGATAGTAAAAGCCCGAGCAGACTTGGCTGTCCGAGTCCATTCGGCAAGGACAGAATGGACAGTCAGAACAGAAGACTGAAGAaatacgagaacgacgacaTTCCTCAGGAAAAAGTAATGCGAATCTATCACGAAGAATTGGCCAAATTGGCGGGCAGACGAGTCGATGATCTTCGGGGTCCTCGCGATTTTCCACCGAGCGCGATGTTTCCCCACTTTTTCAGTGGTGCCCAGGGTCTCCAGGGTGTTGAACGTACGCAGGAGGAAATACGATTGGCTCTCGACGCTTATCATCGCGAATTGCAAAAGCTCAATGTGACACCAGGACAGAACCAATTGGCTGGTCTTTCGGGCTTACCTAATGTGCCAGCTCTATTAGCACTTCAGCAACAGGCACTTCAACAACATCACATGGCTGCTAACGGAGGTGCCGGTGTGCAGGATCTCAGTTTGGGAAAGATAGATCCACGTAATAAAATGATGAACGGCGTgacggaagaagaaaaggataAGATGGAGGAAGCGATGAGACACGCCGGTAGTGCGTTTTCATTGGTTCGACCCAAACAAGAGCCAAGCGGACCTCAATCGACGCCCGGTGGCTCGAGCGCGAGTTCGCCCTTGGGCAATTCAATATTACCGCCGGCGATGACACCGAACGAAGAATTTACCGGTGCCGCTGCGGCAAGTCCGTTGCAAAGAATGGCATCGATAACGAACAGTCTCATAAGTCAACCGTCCACACCGACGCATCATTCGGCAAATCAAAGACCCTTAAAAGCCGTTCTACCACCGATAACTCAGCAACAATTCGATATGTACAACAATCTTAATACCGAAGACATCGTGAAAAGGGTAAAGGAACAACTGTCGCAATACTCGATCTCCCAACGTCTCTTCGGAGAATCCGTGCTGGGTCTTTCCCAGGGCTCGGTCTCGGACCTACTGGCACGACCTAAACCGTGGCACATGCTTACCCAAAAAGGTCGCGAACCTTTCATCAGAATGAAGATGTTCCTCGAGGATGATAATGCTGTACACAAGTTGGTGGCAAGCCAGTACAAAATAGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGTACACCGATGAAGCCGATGCCACCAACGAAATTGGTTCAGGAGCAGTTACAAAATGCTGCGAAGGCTCAAGCAGCGGCCCAAGCCGCGGCGCAGGCAGCGGCAGCAGCGCAACATCAGCAGGAGAGTCAAATGCAGCTAGGTCCGCCCCAACCGAGTCCGCAGCATCAGTCGCTTCCTCAGCCACCACCTCCATTGATGCTGACACCACCTGGACCCCTCCATCCTCATGCCCAACTCAGCATACAGGAGTTGCAGAAGAAGCAGgcacaacagcagcagcaacaacaacagcaacagcaacagatGGGCCTGCACTCGCCCCATCATCAGATGGCGCCATCACCACTTCGAAGTCTTCATCAGCACATCTCCCCGAGTGTTTACGAGTTGGCCGCGCTGACGAACGATCTCGACACGCAAATGATAACGACGAAGATCAAGGAAGCCTTATTGGCAAACAATATTGGCCAAAAGATCTTCGGCGAGGCCGTTCTCGGACTGTCGCAAGGCTCGGTCAGCGAATTGCTCAGTAAACCGAAGCCTTGGCACATGCTGAGTATCAAGGGACGCGAGCCATTTATAAGAATGCAATGCTGGTTGTCGGACACTCGCAACGTCGATAAACTTCAGGCATTGAAGAACGAACGACGCGAGGCGAACAAAAGACGACGAAGCAGTGGGCCTGGGCATGACAATAGTTCCGATACCTCGAGCAACGACACTGCGGAATTTTACCACGCCTCCTCTCCCGGTCCAGGACCACCGTCGGCCAAGAAACAACGCGTATTATTCTCCGAGGAGCAGAAGGAAGCTTTGAGGCTCGCCTTCGCTCTCGACCCCTATCCGAACGTTGCTACGATCGAGTTTCTCGCTGCTGAGCTCGCGCTCTCTTCCAGGACGATCACCAATTGGTTTCACAATCATCGCATGAGACTGAAGCAACAAACTCCTCACGGACAACCGGAGCAACAGTCGCCGCGCGAACCTGGACAACCTTTCGATCCTGTGCAATTCAGGCTCTTGCTGAATCAGCGTCTCCTCGAGATACACAAGGAACGCTTGGGTCTCGGCAATGTGCCGATTCCCTACGCACCTTACTTCAATCCCAATATCGCGACGCTCATGAACAATGCCCTCAAGGAACAGTGCTCTGGTCTCGATCTGTCGATGGGCACATTGAAGAGAGAACCGAATCAGGAattcgaggacgacgacggtGACGACGGTATGAGCAATCTTGGCAGCGAAGATTCCGAGGGATCGGTCGGCAGTATGAAGCGTGGCGAGACGACGGATATTAATCAACAACCATCGTCCGCACCGACGACCGTACGATCGAATAGAAGAAAACCTGCGGCACCTCAATGGGTCAATCCCGAGTGGCAAGAACCTCCGAGAACCGGCGACGAAGTTATCATTAATGGCGTTTGCGTTATGCAGACCGACGACTATGGCGTCAAGAGGGAAAATGAAGAGACGGTCAGAGTAGAACCTACACCGGTTCAGGACAGATACGACGAAGACGCGGCGAGCGACGTGTCCTCCGTGTCGGCGAATAACGGACAGGATCGCGACAGTCCATTGCCGAGCTTGAAATCAGTGCAAAACAGCCCGGCCACGTCACCGAGACCACCATCGACGTCGCAACAAATGCAACAACAGTCGAACGATGAAGAAATACCAACGAAAGATATCGTCAAGAACGAGCCTGAAGAAACGTGGgactattga
- Protein Sequence
- MHSRLNDDTTDSGGQLLDEISRLQQSLQRLQETSSQATSRLEEELEARRQHISRLESKLERQRDYDDIKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAETLKPPTTPDALGGLASPLQRAATASPQHAVGGVGGAASVVTGGSAAPPPASLISSSQQAIPTRSTPTPSSATSTASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERTIMSQQQQQQQQQQQQQHQHQAQQQQQQQQQQHLPQQQSHQQQQPLPSQSQTQTLSHLQQSQPVAAAVAVHQALQQQHQQHQQQQQHQQQQQQQQQQQQQQTMHSLHQSTTTNLNHLNHLPSPTDNPSSSASLTNTPAKSNTPQLGGSGVMSAGCLEATEKAPTPIPGHETPAPPTPSSTVALTSPLAPMIVSALQPSQSATTTTTTTILDTLHTSNNCGTNGPSIGMLPGIMPTSLPPKSPQEESCHNNNNSHHLANNNIGGLSVLDTLKNPYRFDDRTHPFRFGDEFGAAGMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPTFGRGPQDGGPPDMSDERLAHILSESGHLQMSRGEHDTSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVMRIYHEELAKLAGRRVDDLRGPRDFPPSAMFPHFFSGAQGLQGVERTQEEIRLALDAYHRELQKLNVTPGQNQLAGLSGLPNVPALLALQQQALQQHHMAANGGAGVQDLSLGKIDPRNKMMNGVTEEEKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPNEEFTGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAQHQQESQMQLGPPQPSPQHQSLPQPPPPLMLTPPGPLHPHAQLSIQELQKKQAQQQQQQQQQQQQMGLHSPHHQMAPSPLRSLHQHISPSVYELAALTNDLDTQMITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQCWLSDTRNVDKLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAAELALSSRTITNWFHNHRMRLKQQTPHGQPEQQSPREPGQPFDPVQFRLLLNQRLLEIHKERLGLGNVPIPYAPYFNPNIATLMNNALKEQCSGLDLSMGTLKREPNQEFEDDDGDDGMSNLGSEDSEGSVGSMKRGETTDINQQPSSAPTTVRSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRYDEDAASDVSSVSANNGQDRDSPLPSLKSVQNSPATSPRPPSTSQQMQQQSNDEEIPTKDIVKNEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_01057530;
- 80% Identity
- iTF_01057530;