Basic Information

Insect: Netelia thomsonii
Gene Symbol: znf423
Assembly: GCA_964017225.1
Location: OZ024923.1:2573429-2584066[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1e-05 0.00076 19.9 1.5 1 23 97 119 97 119 0.98

2 20 0.57 43 5.0 3.9 1 23 125 147 125 147 0.97

3 20 1.3e-06 9.9e-05 22.7 4.1 1 23 153 175 153 175 0.99

4 20 0.00027 0.02 15.4 0.2 1 23 181 203 181 203 0.99

5 20 0.0003 0.023 15.3 0.3 1 23 356 379 356 379 0.97

6 20 0.52 39 5.1 0.0 2 23 390 412 389 412 0.88

7 20 2 1.5e+02 3.2 0.1 3 23 477 497 476 497 0.96

8 20 0.00018 0.014 16.0 0.2 3 23 513 533 512 533 0.97

9 20 0.00097 0.073 13.7 0.5 1 23 542 565 542 565 0.94

10 20 2.8 2.1e+02 2.8 0.1 1 23 570 593 570 593 0.91

11 20 0.83 62 4.5 2.1 2 23 667 688 667 688 0.96

12 20 0.021 1.6 9.5 0.0 1 23 693 716 693 716 0.95

13 20 1.7 1.3e+02 3.5 0.1 2 23 785 808 784 808 0.87

14 20 5.4e-05 0.004 17.6 1.0 2 23 824 846 823 846 0.96

15 20 0.3 22 5.9 0.6 1 23 855 878 855 878 0.86

16 20 7.9 5.9e+02 1.4 0.0 2 23 886 907 885 907 0.94

17 20 0.0069 0.52 11.0 0.2 2 23 1088 1110 1088 1110 0.95

18 20 0.051 3.9 8.3 0.5 1 23 1120 1143 1120 1143 0.96

19 20 0.019 1.4 9.6 0.1 2 23 1186 1208 1185 1208 0.94

20 20 0.034 2.5 8.8 0.9 1 23 1215 1238 1215 1238 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1e-05	0.00076	19.9	1.5	1	23	97	119	97	119	0.98
2	20	0.57	43	5.0	3.9	1	23	125	147	125	147	0.97
3	20	1.3e-06	9.9e-05	22.7	4.1	1	23	153	175	153	175	0.99
4	20	0.00027	0.02	15.4	0.2	1	23	181	203	181	203	0.99
5	20	0.0003	0.023	15.3	0.3	1	23	356	379	356	379	0.97
6	20	0.52	39	5.1	0.0	2	23	390	412	389	412	0.88
7	20	2	1.5e+02	3.2	0.1	3	23	477	497	476	497	0.96
8	20	0.00018	0.014	16.0	0.2	3	23	513	533	512	533	0.97
9	20	0.00097	0.073	13.7	0.5	1	23	542	565	542	565	0.94
10	20	2.8	2.1e+02	2.8	0.1	1	23	570	593	570	593	0.91
11	20	0.83	62	4.5	2.1	2	23	667	688	667	688	0.96
12	20	0.021	1.6	9.5	0.0	1	23	693	716	693	716	0.95
13	20	1.7	1.3e+02	3.5	0.1	2	23	785	808	784	808	0.87
14	20	5.4e-05	0.004	17.6	1.0	2	23	824	846	823	846	0.96
15	20	0.3	22	5.9	0.6	1	23	855	878	855	878	0.86
16	20	7.9	5.9e+02	1.4	0.0	2	23	886	907	885	907	0.94
17	20	0.0069	0.52	11.0	0.2	2	23	1088	1110	1088	1110	0.95
18	20	0.051	3.9	8.3	0.5	1	23	1120	1143	1120	1143	0.96
19	20	0.019	1.4	9.6	0.1	2	23	1186	1208	1185	1208	0.94
20	20	0.034	2.5	8.8	0.9	1	23	1215	1238	1215	1238	0.93

Sequence Information

Coding Sequence: ATGCTTTTCAAAGGCAATAGTTCGAGATTGGAATTGCTGATTGGAAAAATTCAGGCGCACAAGGAATCCCCGTCGCCACCTCGGCCTGACAAATGCGGTTCTAGATCAAAAGATGCTCTGGGCACTGGTAGCTCCTCGTGGCACAGCGAGGATGGAGGACCGAATTCCCGACGGGGCGGCGAGACCCCGTCGTCCTGCGCGACCCCAACTTCCGCGAGTTTTCCATCGGAACCGGAAGTCGATAATGAAGTGGGAATCAGCGCCGATGGAAACAATCCAGCGGCTCCTTATCCTTGCCAATTTTGCGACAGAACGTTTCCTCGACTTAGCTATTTGAAGAAACACGAACAGAGTCACGGCGATCAAATGCCGTATCGTTGCAGTTGGTGCGCGAGGCTCTTCAAGCACAAGCGTAGCAGAGATCGCCACGTAAAGCTGCACACTGGTGACAGAAGATATCGTTGCTCCCATTGCGAAGCAGCGTTCTCCAGAAGCGATCACCTCAAGATCCACATGAAAACCCACGACAACCAAAAGCCTTATCAATGTACGGCCTGTTCCCGCGGCTACAACACCGCTGCCGCCTTGACGTCGCACATGCAGTCGCACAAAAAGTCGCATCAGAGTCCAAGTCAAAATCCAAAATTGGACATGGAATACGGTCGTCGAAGTGTCTCGTCGCACAGCACATCGTCACCACCGATCCAAAATTCGCCATCTCCTAGCCTCAGTCTGAATCTGAAAAATTCATTGAAATCGCAACAATCGACGTATCCGAATAACGCACCTAAAACTCCCATGCTGAACTCACCCCTGAAGCTCGCCTGTATGTACTGCACCAAGGACTCGTTCACGAGCATGCAACAGCTCCAGGTGCATGTGCACGCGATGCATTTGGCAATTTTGAATGGTGAAAATTTAAAGGTCGAGTCCTCGGGCTCGAATCAGCCGGAAGCGAACAATTCCAAGAGCCGCGAGGCTGACAGCCACGAGAGAAACAGCGCCGAATACGAGAGAAACTATCATCGCGAAGATCGCGAAAAATCGGCAATATTGGAAAACGGGTTTTCCTGTGGTCAATGTACAATGAAATTTTCCAGTCTTGGTGAGCTGCGCGATCATCTACTGACGATCCATCGTAACGACGGTTACGGCTCGACCCTCATGATGTGTCCGCTTTGCGGAATTCCATGTGTTTCGGCGACCGCTTATGCCGAACACTACGTGCTTCAGCACTGCGATAATCGACGTGTGACGCCGAAGGACGCGATTCAGCGTGAGTGGGAAAGCGCAAGGGTGAACGGAAGTCGGGAGAACAGTAGAACTGGTTCGGACGAGAACGCGACGATCGGTACGATCGAACCTGCCGATTTGACGAAGAAGCAGTCGAGGTCGGGCGACACGGGCTACTCGACCGGTACGCTCCTCTGCGGACAGTGCGGCGCAGCCATGAAGGATTTCGAGTCCTTCAGGGAGCATCTAGCGAGGCATTTGCAAGCCGATCAGCAGAGTAGCGAAATCGTGCCGAGAAATCCTTGCCCGAAATGCGGCACCAATTTTTCGGATCGCGAAGACATGCTCGCGCATCTCACCAAGCATTATCTCGGTCAGGTGACCAAGGAATACACCTGCGGCGCATGCAAAAAGTTCTACCCCCACCCTGACCTCCTGCAGCGCCACTTGCTGGACGCGCACGCGCATCACCTGTATCGTTGCGCCGTATGTCGGGACACTTTCGACTCACGTGTCGCTATTCAGGTCCACTTTGCTGTAAAACACAGTCAGGAGTGTCAGATTTATCGCTGCAGCGCCTGCGCCACCACTTCCGGAAATGAAAATTCACCTGGAAATTCGCCGATCGATGGTAAACACTATTTTCGTAGCGAGGCAGAAATGGCGAATCACGTAAGGACGGTTCATGCGCCAGCGACCGTCGTCAACGAGAGTCCTTCGAGGAAGAGTCCTGCGTTGATACCGGTCGCGACCGTCACCACGCCCAGATGCGTCTTTTGTGGGATCTGCTGCAACAACGATCTCGAGCTTCAATTACATCTCGCCAGTCACTCAACAAATTTGTATCGGTGTCCGATTTGTCGTGACGGATTTCCGGTAGAATTCCTGCTGGAGAGGCACATGGCGCAGGCACATCGTCCTACGGGTGACAGGAACGACGCCAGGGAGAACGGGAGAATGTACAGGACGACAAGGTCGCAGGACGAAACGACACGGGCCCAAAAAAGAGGTCGTTCACCAGCCTCGAGCAACAACAATTCGTTAAATCAACGCGACAACAACACCAAACGAACAAATTACGGTGCGACGAACGGCACGGCGTTGATGACAGGTAGCCAGCAATGTGATCTGTGCGAACGTGCCGAATTCGCGACTGAGGCCGAGCTTCAGGCCCATAAAAAATTAGTTCACACCCCCGTGAAGCTCCAGCCGAAATCCTTGCCCCAGCTGAGCATGACTTGTGCCTACTGTGGCGAAGTCTGTCGATCCCGCAGCGATCTCGAGTCTCATACGAGGATTCAGCACGCCTCAAACGAGCCAGGAGGACGTCACAAGTGCAACATCTGCGACGAGGTCTGCCCATCTGGCGGTGTTCTTGCTGAACATAAGCTACAGACACATTGTAAGATTCGGCTGAGCGACACCTGTGTGGTTTGTCGCGGTGCCCTGGCGAACGAGGCGCAATTCATCGAACACGTCCAACGACACAGTCTTGAAGGTGTCGAGTCGCAGCAACGAATGGACACAAGTCTTCCTCTACTTCCGGCGCCGTGCGTAGTTTGCCGTCAGACCCTCATCAGCGACCTTGAGTGTCGTCTTCACGCGGCTCATCATCTTCGTGGCTCCGGTGGTCAACAAATTTCCAATTCGAGTCCGAGTCCGAATCATTCAAAAATCAAATCCCAACAACCTCAACAAACGTCCCTCAGCTGTTGTCTTTGTCTTCGCGAATTTAGTGCTGATGATTTTGTCAGTTTGCCCTCAAATCCTGCTGGTATCGGGGGACCACCATTAAGGGTGTGCAAACCCTGCTACGTCAGACACTCGCAAGGATTGCCGATACTTAGTTCGCCTTACGAACACGTCAGGCAATCCAAGGGAGAGAGGAGTGGTTGGACCAATGGCCAGGACACTACGAGTTGGGAGGATAGGGATCCCTGGGACAATGACAGATCCTTCAGGAATGACGAGAACGACAGGAATACGGGTGTCGCGAGTAAAAGTGGGATCAAGGATTCCGATGGTAACAGGTGCGACGAGTGTGGGATCAAGTTTGAGAATTCCGAGGAGGCCGAGACTCACAGGAGCAAGGAGCATGGAAATAAGGCTGGAAATGCGAATACTTATACTTGCATACAATGCCAGATGTCCTTCCCCACCGAGGACAAAATTCGACAACACGTGAGGAAGGTGCACCTGGAATCGCCGAGCAAGGCTTCCATCGAGGCTCTGCGCTGTCATCTTTGTATATTCGAAGCTAACAGTCCGCTTCAGCTTCAAGGACATCTGATCGAGCATACGTTTGCCGGATGTGCTGGTCTCACTTGTTACATTTGTCAGGGGTTATTTACTACCCCTATTGCTCTGCAGaatcATATGCTGCAACAACACGGACTGGGTGCTCGTCCCTACGACTGCAGTTACTGCGGTCTAAAATTTTTCTTCCGGATCGAGTTGGATCATCACGTGGTGATGGTGCATCGAAGAAGCGAAACTTCGTCACCTCCAGTCGACGTTGGACAGGAAGTCGCGATGGAAAATCGACCGCTGCGAGGAGAATTACGTAATACCTTACAGTCGTCTGAAGAAGGTCACGAGGGTCATTCGCGCTCGAGAAGCGTTACCGTCAAAGAAGAAATCGTCAATAGTCCGGAAGGAAAGGAAATCAACTCGGACGATAACGCGGATCAGACTGACGACATTGACGCTAAGAGGGAGGAACACCATTTGGTGGAAGCCAAGAGAGAACCGTACGTTGGCTCgcacgtcgatgaaaaaaatcaatcttgA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKESPSPPRPDKCGSRSKDALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDNEVGISADGNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKSHQSPSQNPKLDMEYGRRSVSSHSTSSPPIQNSPSPSLSLNLKNSLKSQQSTYPNNAPKTPMLNSPLKLACMYCTKDSFTSMQQLQVHVHAMHLAILNGENLKVESSGSNQPEANNSKSREADSHERNSAEYERNYHREDREKSAILENGFSCGQCTMKFSSLGELRDHLLTIHRNDGYGSTLMMCPLCGIPCVSATAYAEHYVLQHCDNRRVTPKDAIQREWESARVNGSRENSRTGSDENATIGTIEPADLTKKQSRSGDTGYSTGTLLCGQCGAAMKDFESFREHLARHLQADQQSSEIVPRNPCPKCGTNFSDREDMLAHLTKHYLGQVTKEYTCGACKKFYPHPDLLQRHLLDAHAHHLYRCAVCRDTFDSRVAIQVHFAVKHSQECQIYRCSACATTSGNENSPGNSPIDGKHYFRSEAEMANHVRTVHAPATVVNESPSRKSPALIPVATVTTPRCVFCGICCNNDLELQLHLASHSTNLYRCPICRDGFPVEFLLERHMAQAHRPTGDRNDARENGRMYRTTRSQDETTRAQKRGRSPASSNNNSLNQRDNNTKRTNYGATNGTALMTGSQQCDLCERAEFATEAELQAHKKLVHTPVKLQPKSLPQLSMTCAYCGEVCRSRSDLESHTRIQHASNEPGGRHKCNICDEVCPSGGVLAEHKLQTHCKIRLSDTCVVCRGALANEAQFIEHVQRHSLEGVESQQRMDTSLPLLPAPCVVCRQTLISDLECRLHAAHHLRGSGGQQISNSSPSPNHSKIKSQQPQQTSLSCCLCLREFSADDFVSLPSNPAGIGGPPLRVCKPCYVRHSQGLPILSSPYEHVRQSKGERSGWTNGQDTTSWEDRDPWDNDRSFRNDENDRNTGVASKSGIKDSDGNRCDECGIKFENSEEAETHRSKEHGNKAGNANTYTCIQCQMSFPTEDKIRQHVRKVHLESPSKASIEALRCHLCIFEANSPLQLQGHLIEHTFAGCAGLTCYICQGLFTTPIALQNHMLQQHGLGARPYDCSYCGLKFFFRIELDHHVVMVHRRSETSSPPVDVGQEVAMENRPLRGELRNTLQSSEEGHEGHSRSRSVTVKEEIVNSPEGKEINSDDNADQTDDIDAKREEHHLVEAKREPYVGSHVDEKNQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01056279;
90% Identity: iTF_01056279;
80% Identity: -