Ntho005715.1
Basic Information
- Insect
- Netelia thomsonii
- Gene Symbol
- clz9
- Assembly
- GCA_964017225.1
- Location
- OZ024921.1:14151955-14154567[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 6.3e-05 22.7 0.0 3 33 16 46 15 52 0.91 2 2 5.9 2.9e+03 -1.8 0.1 24 35 86 97 86 98 0.85
Sequence Information
- Coding Sequence
- ATGCCTCGAAACTATGAACGTAAGACTGAGAAGAAATATTCCCTCGAAACTTTGAAAATTGCtataaggaaaataaaaaacaaggaATTAAGTTTTCGACAAGCCGAACAAAAATATGATATTCCGAGAGCAACGCTGTTCGATCAAGTTGCAAAATATGAACAAGATATTACTTACCCGAAGCGTGGTAAGAAGCCAGTTTTTAACGAGATCCAAGAAGAAGAGTTGGTGCAGTTCATCCTAAAATCCTGCAAAAATTACTACGGAATCACAGTACCTACGCTTAGGAAAATAGCATTTGATTTTGCTACTGCGAATGGTTTGAAACACAAATTTAATGTGGAGACACAAATGGCTGGCATGGATTGGTATTATTCGTTCCTCTCAAGACATTCTACAATATCGCTACGTAAACCAGAAGCGACATCTTTGAGCCGAATAACGGCCTTTAATAAGGAGGAAACAGATATTTTCTTCGACAACTTAATTCAACTAATGTCGAAATATAATTTCAAAGCAGATGCTATTTATAATGTAGACGAGACAGGGATCAGTACAGTCCAAAGAAATTCCAGAATTCTGGCACCAAAGGGTTTAAAGCAAGTAGGTAAATGTACCAGCGCTGAACGCGGGAGCCTAACGACTGTAATAAATGCATGCAGTGCTGCGGGAACTTATGTTCCgccgtttttcatttttaaacgaAAACGTATGAATCCGTTGATCATGAAACAGAGTAACAGTGATATGGTGGCATCTATTTCTGATTCTGGTTGGATAACAGAATCATTATTCGTTGATTGGCTGCAGCATTTCAAAAGCTACGCTCGACCATCGGCggataatttaattttgttaatcCTTGATAATCACGCAAGTCACATCAGCTTAGATGCTTATAGTTTTTGCAAAAAAACCTTCATACATGTTTTAACACTGCCCCCGCACACTCCTCATCGCATGCAACCCCTTGATTTGACCTTTCATCGCCCATTGAAAACGGCTTACAACAGAGAATGCGAAGCCCATATGGTTAACGATCCCGGTACCAAAATAAATACATACGATGTTGTAGGATTGTACACAAAGGCTTTTAACCGTACAACAACTATAGAAAAAGCAGTGAACGGATTTAAAGCTGCCGGGATTTACCCCATGGATAAGAACAAGTTTATCGCCGCATTTGAATGTTTTGGAGACATAGTGGATTCGCAACCAGTGAACTCCACTAATGCGCTAACCTCAAGGACCTCCCAAAATGAGAATGAACCTGAAAATGTACTTCCTCAAGTTCTAGAACAGTCTGGTCTCAGTTTTGGCGACGTTGTGCAAAACTATTCTTCAAGCCTGCTTCTCGAAGTCTCCTTCGAACTGTTCGGTCAGAAATGTTGA
- Protein Sequence
- MPRNYERKTEKKYSLETLKIAIRKIKNKELSFRQAEQKYDIPRATLFDQVAKYEQDITYPKRGKKPVFNEIQEEELVQFILKSCKNYYGITVPTLRKIAFDFATANGLKHKFNVETQMAGMDWYYSFLSRHSTISLRKPEATSLSRITAFNKEETDIFFDNLIQLMSKYNFKADAIYNVDETGISTVQRNSRILAPKGLKQVGKCTSAERGSLTTVINACSAAGTYVPPFFIFKRKRMNPLIMKQSNSDMVASISDSGWITESLFVDWLQHFKSYARPSADNLILLILDNHASHISLDAYSFCKKTFIHVLTLPPHTPHRMQPLDLTFHRPLKTAYNRECEAHMVNDPGTKINTYDVVGLYTKAFNRTTTIEKAVNGFKAAGIYPMDKNKFIAAFECFGDIVDSQPVNSTNALTSRTSQNENEPENVLPQVLEQSGLSFGDVVQNYSSSLLLEVSFELFGQKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -