Basic Information

Insect: Netelia melanura
Gene Symbol: ttk
Assembly: GCA_964007305.1
Location: OZ023259.1:23969620-23978377[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 9.1e-07 0.00011 23.1 1.8 1 23 739 761 739 761 0.98

2 8 8.5e-06 0.00098 20.0 2.3 1 23 767 789 767 789 0.98

3 8 2.2e-06 0.00026 21.9 0.3 2 23 798 819 798 819 0.98

4 8 7.3e-05 0.0085 17.1 0.1 3 23 827 847 825 847 0.97

5 8 2.4e-07 2.8e-05 24.9 3.0 1 23 853 875 853 875 0.98

6 8 2.8e-06 0.00032 21.6 2.1 1 23 881 903 881 903 0.98

7 8 8.4e-05 0.0098 16.9 7.5 1 23 909 931 909 931 0.98

8 8 0.00011 0.013 16.5 1.5 1 21 937 957 937 958 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	9.1e-07	0.00011	23.1	1.8	1	23	739	761	739	761	0.98
2	8	8.5e-06	0.00098	20.0	2.3	1	23	767	789	767	789	0.98
3	8	2.2e-06	0.00026	21.9	0.3	2	23	798	819	798	819	0.98
4	8	7.3e-05	0.0085	17.1	0.1	3	23	827	847	825	847	0.97
5	8	2.4e-07	2.8e-05	24.9	3.0	1	23	853	875	853	875	0.98
6	8	2.8e-06	0.00032	21.6	2.1	1	23	881	903	881	903	0.98
7	8	8.4e-05	0.0098	16.9	7.5	1	23	909	931	909	931	0.98
8	8	0.00011	0.013	16.5	1.5	1	21	937	957	937	958	0.95

Sequence Information

Coding Sequence: ATGATGGGAGAAGTGATAAGAGTATCGGGACGAGGTCCGGATGTCGGTGACCTGCTTAAAGAGGCCATGCTGTCGCAGAGATTCGCCGATGTGGCCTTGTGTTGCTCGGGAGGTCAGCGCTTTTTGGCACATCGTCTCGTTCTATCGGCCGCGAGTCCTTATCTTCAGGAAGTGTTATTGGCGCATGGAAGAGCAGCGGGTTACAACGAGCCGATAACGATGATTCTGGCCGAGGTGGAGGGAGCGGAATTGGCGGCGATTCTCGGGCTGGTATACACGGGAAGCGCGACGATACAAAAATCCCGTCTGGAGGCATTCACGCGAGCCGCGGAGACGCTTCACGTGAGAATTCCGCCGGTGACCGGCCCACCGGCGACCTGCACTTACCTCGATCCTCCTCCGTATCGTCGGCTCTCCACACCGGCTCCGTTCCGCCTCCACCGTGaggtcgacgacgacgaggacgattgCTCCCTCGATAACGTCAAGATCGAAGGGACGAGCAACTTGGAGCAGGCGAGATATCTTCGTCGAGAGAAATATGCTCGTCGCGAGGCTCGTTACGATCGATCGAGCTGGTATCGCGATTCACGTTTCGGATCGTCGGGCCAGGACTTTCGGCGCGACGATAATACGATGAGTTTCGGTATCTTCGACGCCGGGACCAAAAATCCGTCTCCCGATAAGAGTCAAACGTTTCTTTTCGAAAAACGAATAAACTTGGAGAGTGCGgagaaatttgaaagaaagGATTATTACGAGAACGTCgataaaagtgaaaatattCGTCCGAAAGAAATCGATACCGTCGCGACCGATCGCACATGGTTCGTGGATAATTCGACGATTTCGTTATCGATCGACTCGTCGTTGCTCGAACATCCCGCGACGTTGCGCTTCGGGAGTGTTTCGGGAGACGAAAACGATTATTACCAGGTCGGGACTGGATCGAGTGCGTCGAATTTCGTTCGCGTTTTTGCTCCTCCGACCGATCGGCGCGATGTACTTTTAACGACGAACGTTGATTCGGATAATTTTGAAGGTGTTGGAAGGAAGGACGCTCTCGCGCCCTCGTTATCCCCCGATCCTCGAGCGCCGATCATAAAATCTTTCGAAAGGAGGAATTACGATCGCGAGGCAAGGTCATTGGAGGTGCCGATCGTTGGTACTGGAAGATCGCTTCCAAACGCCCTATCGACCTGCGCCACCGTTACTTCGGAGGTCGTCGCGAACGTGCCGAGCTCCACCGAGATCGTGGCTAGAAAAAACGGCGAGGAGACGTGCGTCGATAATTGCTGCGGATGGAGAAGACCGAGAAGACACGTGGCGAATCGCGTGCCAGCCTCGCCCTGGTGTCAGCTCGCTCGACCGGCTCATCATTCCCCGAAAACTCGATCGGTCCTTCTCTGCGCAAATGGGGAGGCAAGCGTCGAAATGGCAGGAGGACCTCTTGGATGGACCGAGTCGGTTCCCTCGGGCGAGAGACGGACGAGTCCTTTCGCTCCATCACCGGTCGTCGGTGCGATCTACGATTTTAAAGTTCCTAAAACGAGGGAGATCTCGTCGAATATCGACGAGGAAAGCGTCGGTACTGTCGACGTTGGAACGCCTCGTCCAAATTTCTACGAAGCTCGCGcaccatttatttttcctatgGAGGCGATACCTCCGCCGACGGAAGGATCGACGCGGACAAGTTCGTCGAATCGAGCGGTCGTTCGTCGCGATCTCGAACCGTTGCCCACGAGAATTACCGCCGCTCGACGACAACCATCACCCGTCGGCATTTCTGAAAACACGATCTCGACGAGTACTGGTGCCGCGATAACAGTCCTCGATAACAACGATCCTCCGACATGCGATCTTCGAACATCGCCAAGAATCGAACTTTCCCATCCCGTGAGCCGACTTTGCGATATCGCGCGTACGACGGACGACGTCCCGACTGGACCGACTAACCCGACTAATCGAGATCACCTTTCGACGACGAACGATCCATTACGAACAACCGTGGCGATGCTCGGAGACGTTGAAAATAACAATCGAGATGCCGCTCCAATTTTTCGTGccaaaacgattttttcgacaTCTGGTGGCGATATAATGCCGAAGaacgacgataataacaaCGAGGCTAGAATCGAGGAGGATGGCATCGAAATAACATCGGGCACGGGGAGTGGAGGAGAAGCGGTCGGCGCCGGTAACGAGGAGCACAGGTGCGACCAGTGCGGCAAGACTTTTGTCACCCGAGCCTCCCTCAAGGTTCACGGGCGTACGCATTCGGGCGAGAAGCCATTTCGTTGCAACGATTGcggaaaagaattttctcaGCTGCGGAACTACAAGTATCATCGGAGCGTGCACGAGGGCACGCGAGAATTTGCGGCGACGTGCCCCGAGTGCGGCAAATACTTCAACGATCGGGGCTATCTAAGTTCCCACATGAAGATCCATCGGAACCGTAAGGAGTACGGCTGTGCCGAGTGCGGCAAGAGTTTCAATCAACGGGTCGCGTATAACATGCACGTGAGAATTCACACGGGCGTCAAGCCGCACCAGTGCGACCAGTGTGGCAAGGCCTTCTCTCGAAAGATGCTCCTCAAGCAGCATCTACGCACGCATTCGGGCGAACGTCCCTATCAGTGTCAGATATGTCACAAGGCATTCGCCGACAGATCGAACATGACCCTCCACACGCGACTTCACTCGGGTCTCAAGCCTTATCAGTGTACTCTATGTTCCAAAGCGTTCACCAAGAAACACCATCTCAAGACGCATTTGAATTATCACACCGGCACGAAACCCTACTCCTGTCCAAATTGTTCGCTGAGGTTCTCCCAGAGTAGCAATATGAGAACTCATTATAAAAAGTGTTCGACGATAAACGGGGGTGGTACGTCGCAGCGTTGTCCAACGATACGTACCAACGATACCGATGAGAAAGCGTCCTCTATCGGCGCCTCTATTCCCGTCAACGATCCTAAAGGCCCGTCTCACGGTGGAAACAGGGCTAATAATTGCGCTCTCACACCACCAAGTTCCGATCAGGAATCGAGTATTCTCGCGGTGTCGCCCGTTCTGGCCCAGGAACGATTGGCTCGATCCATCTCCCGAGGATTCGTCAACGAGATCCGAAATAAAGACATCGTCGCTGCTGCCGCCGACACCAACACCATTCCTGGTACATGA
Protein Sequence: MMGEVIRVSGRGPDVGDLLKEAMLSQRFADVALCCSGGQRFLAHRLVLSAASPYLQEVLLAHGRAAGYNEPITMILAEVEGAELAAILGLVYTGSATIQKSRLEAFTRAAETLHVRIPPVTGPPATCTYLDPPPYRRLSTPAPFRLHREVDDDEDDCSLDNVKIEGTSNLEQARYLRREKYARREARYDRSSWYRDSRFGSSGQDFRRDDNTMSFGIFDAGTKNPSPDKSQTFLFEKRINLESAEKFERKDYYENVDKSENIRPKEIDTVATDRTWFVDNSTISLSIDSSLLEHPATLRFGSVSGDENDYYQVGTGSSASNFVRVFAPPTDRRDVLLTTNVDSDNFEGVGRKDALAPSLSPDPRAPIIKSFERRNYDREARSLEVPIVGTGRSLPNALSTCATVTSEVVANVPSSTEIVARKNGEETCVDNCCGWRRPRRHVANRVPASPWCQLARPAHHSPKTRSVLLCANGEASVEMAGGPLGWTESVPSGERRTSPFAPSPVVGAIYDFKVPKTREISSNIDEESVGTVDVGTPRPNFYEARAPFIFPMEAIPPPTEGSTRTSSSNRAVVRRDLEPLPTRITAARRQPSPVGISENTISTSTGAAITVLDNNDPPTCDLRTSPRIELSHPVSRLCDIARTTDDVPTGPTNPTNRDHLSTTNDPLRTTVAMLGDVENNNRDAAPIFRAKTIFSTSGGDIMPKNDDNNNEARIEEDGIEITSGTGSGGEAVGAGNEEHRCDQCGKTFVTRASLKVHGRTHSGEKPFRCNDCGKEFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCDQCGKAFSRKMLLKQHLRTHSGERPYQCQICHKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCPNCSLRFSQSSNMRTHYKKCSTINGGGTSQRCPTIRTNDTDEKASSIGASIPVNDPKGPSHGGNRANNCALTPPSSDQESSILAVSPVLAQERLARSISRGFVNEIRNKDIVAAAADTNTIPGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01056209; iTF_01057841; iTF_01057799; iTF_01057042; iTF_01057102;
90% Identity: iTF_01056209;
80% Identity: iTF_01056209;