Basic Information

Gene Symbol
-
Assembly
GCA_964007305.1
Location
OZ023256.1:34723962-34735688[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 7.3e-06 0.00084 20.2 1.0 1 23 226 248 226 248 0.98
2 31 0.0031 0.37 12.0 1.9 1 23 271 294 271 294 0.96
3 31 0.00023 0.027 15.5 0.5 2 23 301 323 300 323 0.96
4 31 0.00022 0.026 15.6 0.4 1 21 343 363 343 364 0.95
5 31 0.0032 0.37 11.9 0.2 2 23 459 480 458 480 0.94
6 31 0.19 22 6.4 0.2 1 23 486 509 486 509 0.89
7 31 0.00014 0.016 16.2 0.1 1 23 569 592 569 592 0.96
8 31 0.0093 1.1 10.5 0.4 1 23 598 621 598 621 0.96
9 31 0.12 14 7.0 0.9 1 23 634 656 634 656 0.96
10 31 4.1e-05 0.0048 17.9 0.9 3 23 701 722 700 722 0.96
11 31 0.043 5 8.4 1.1 2 23 785 808 784 808 0.93
12 31 6.5 7.6e+02 1.5 0.0 2 23 817 839 817 839 0.83
13 31 0.067 7.8 7.8 0.1 2 23 846 868 845 868 0.95
14 31 1.5e-05 0.0018 19.2 1.2 1 23 876 898 876 898 0.98
15 31 1.3 1.5e+02 3.8 0.7 2 23 934 957 933 957 0.92
16 31 0.00024 0.028 15.4 3.3 1 23 960 983 960 983 0.97
17 31 0.021 2.5 9.3 0.5 2 23 990 1012 989 1012 0.95
18 31 0.004 0.46 11.6 5.2 1 21 1040 1060 1040 1061 0.95
19 31 0.0031 0.36 12.0 1.8 2 23 1075 1096 1074 1097 0.93
20 31 1.2 1.4e+02 3.9 1.0 1 23 1100 1123 1100 1123 0.94
21 31 0.0058 0.68 11.1 1.4 2 23 1130 1153 1129 1153 0.93
22 31 3.5 4.1e+02 2.3 0.2 2 23 1161 1183 1161 1183 0.94
23 31 4.2 4.9e+02 2.1 0.0 2 23 1190 1212 1189 1212 0.87
24 31 0.26 31 5.9 2.7 2 23 1221 1243 1221 1243 0.96
25 31 5.8 6.7e+02 1.7 0.6 2 23 1249 1271 1249 1271 0.94
26 31 0.18 21 6.4 0.1 1 23 1330 1353 1330 1353 0.93
27 31 0.0018 0.21 12.7 2.7 1 21 1381 1401 1381 1402 0.95
28 31 0.16 18 6.6 1.2 2 23 1502 1524 1501 1524 0.94
29 31 0.031 3.6 8.8 0.7 2 23 1531 1553 1530 1553 0.97
30 31 0.81 94 4.4 2.5 1 23 1564 1586 1564 1586 0.97
31 31 0.15 17 6.7 0.2 3 20 1595 1612 1595 1614 0.95

Sequence Information

Coding Sequence
ATGGAGCCATCGAAGGAACGCTACAACGAGCTTTGCAGGCTCTGCGCCTCTTACGATGCCGTCAAAATGGATATATTCGGCAATGAGGGCAAGAATCGTCAGCTCGTCGACAAAATTCAGACCTGTCTCCCATTCAAAATAGCTGAAGATGACCGACTGCCCAAGTGTCTTTGCTATCGGTGTATGTACAATCTGGAGAATTTTTACGACTTCAGAACGGCGTGCGTGAATGCTGTAGCACTTTTAGAGAGCTCCCTTCCACCTGGCAACAATGTCGCAGGCAACGGAATTGAGaatgacaatgaaaaatatttggagTTGCGCTCGGAGCTTCtcaaggaaaaggaaaaaatgccTATACTCATACCGGAAGCCCCCATAGTGAATCCAAACGCTGCACTTGGCACACCACCCAGACTGAACTCTGATGGAGAAGCAGATCATGATATCGAGGAGATTCAAGACATTAGATGCATCGATGATGGCTTCGTCGAGGATGCCGAGGATCGTAAATCGGACGAGTATGAGATGGATATGGAAACGAATCCTAGCGACTTTTTGGAGATGACACCAATGGTCACCGAGGATCTTGACGATACCGATGGAAAAAAGTCACAACCCGTTGTAGCGAGAAATTCAGAAGTTTTTCAGCATACTTCGGAGCAGCACGAGGTTTATGTTTGCTCGTTGTGCAACAAGGCTTTCAGTTCCAAAGGTCATTTGTCGCTTCATGCGAGAATTCACGTTGGTGCCGGCGATGTGATCGGTGCTAAAGTTCTTACCGACGATCATACTTCTTACAAAAGACCCTATCAGTGTGATCTGTGTAACAAGTCTTATTCGACGGCCAAGCATCGATGGGGACACGTATCAACAACTCATAGAGGTCATCCAGCTGTAACATGTGCCTACTGCTCGCGTATATATTCGACACGAACGAATCTTGAGGAGCACATAAAGTCGAGACACACGGGTTTACCACCTCCACCAGAATTGCCCGTTCCTTACGTACAGCCagacaataaatataaatgtaaaacGTGTCCCAAGATGTACACGAACGTGACAGATCTCAATAAACACGGAAGAATATGCGCTGGTGATCGTAGGAAGGAAAagccaaataaaaaaatgcctCCGAAGAGTATAATCGATACATCAGATTTATCGAGTACAGACACTGACAATGACAGCAAGGATTATAGAAATGCAGAGGCGAAACTTTCGAAAAATCCCCAATTGACAATACTCAAGCAAGCATTGACAAAGGGTGAAAGTTTGAAGAGGGATTACGAGGATAGAAGTTCCTCGGGTCACAGACCCGTAAAAGTGGCTAGAACCGACAACAACGAAGGTGATGGTCAGAAGAGGTGGTACTGTGAAATGTGCCCCCGAAATTTTACGACCGTCGACAAATTGAAGGAACACGAGACGATTCACGATGCCGAAAGGCCttacatatgtatattgtgTGAAAAAGATTTTGTCTTAAAAACATCATTGAGTAGGCATATCGTATCGAGTCACGGGGTCGATCCGAGCCCCATTGTTGACAGCGATAAGTGCCTGAAGAAGATCGCGATGACGCAATTGTGGAGAAAAAAACTAATCAAACCGGAGGGGCGCAAAACAATCAGAGACATGAGCGATTCTTCAGAAGATGCCGTAAGCTCGCATGGCAACGTGATTGAGATTGAGACAGTATTTGTGTGCGAAATATGCACTCGCGACTTCAACGATCGTGCCTCGTTGTGGCTTCATATTCGCGCGACTCACAAAGAATTCGCTGCATTCGCTTGCGGTGTTTGTCTTAAGATATGCTCGGACAATGCGCAGCTGCTTAATCACGTTAATATGTATCATGGTGGTTCGAAACTCTTGGTATCTGAGCAAAGAAGATACAGCTGTACTATATGCGGAAGACAGCACgattcgaggaaaaaattaataacccACGTTGCTATTCACAATGTCGATCCGGGCTACGATCCTGCGAGTTTTGTACAGTTGAACAGCAATTATTACaacgaaaatttaaacagtaacGAGACCAATGAACATCTCATGGATTTCGATGCAGAGGATGGTGAAAAAGTTGACTGTTATATTTGTTACAAGTCGTTTCCGAACGAGGATCATCTTATCCGTCATCAACGAAACGCTCACAAgACCGAGCCCGTGATCCCAAGTGCGGATGTTACAATACAAAGCAATGGACCAGGATCCGGGGTCAATGGTACCAAAGCtcaatatcatttattcttcGTTTGTGAATTGTGCGGAAGTTCGCATCCCAGCAAGTGGGAACGTTGGCTTCATGTTAGCAGCAATCATAGCGATGATCCAACAATGAAATGCGAACGAGAGGATTGTGGCAAGATTTTCGCAACGAAGACACTGCGGAACGAGCACGCCCAACATCATTTGATCCAGGGAGCATCGCCGAACACATGCGAAGTGTGCGGAAAACTCTGGGGCAGTCGAGTTGATTACTGGAAGCACGTAATGGGTGTACACTCAGATACTGTACCGTTGATATGCGGCGTTTGTTTGAAAGTATTTCCGGATGTTATAAAATTAAGTACTCATGTAAAGACGAATCACTGGCCACTGACTAACGGTGACTTCAGTTGCGACATATGCGGCAGGCCATACTCAAACAAATCGAAGATGTCTCGACATCGGAAGATTCATGGCTTAGAGGTCGATAGTCTTATAAACAATGGTACGACAATGGACATGTTGAACGAATCCACAACTCACGTGAAGGGTGCGACAGCTCTACCCGAAGCAGAGTTAACGTGCGAGATGTGTAGCGACCTAACTTTCGAGAGTTGGGAAGTCTTGTGCAATCATCGCAGATTGATACACGGCCTCTTTCCGTGCGATTTGTGCAACAAGTGTTATGGCAGAACTTCCCATCTGTGGAAACACGTCAATCGTGTACACAAGGGACACAAAGATGTGACTTGTCGATACTGCATGAAAACAAGCGCGTCGAAGGATCATCTAGCTGCGCATATAGCCAAGATACATCGTTACGAGCCAGACAGCAAGCTCGAAGTACGAGAAACTTCCAACCACGGGAAACAAACGACCATCGAAGACGAGGGTGTCCATCACTGTGACAAGTGTAACAAAGGATTTCACAAGCGATATTTGTTGCGTCGTCACATGAAGGGTTGTCAAAATTACCGCAAAGATCCAGGCGCTCTGTTGACACGCTGTCGAGCTTGCGAACGAATATTCAAAGACCGTGCCAGCCTTCAAAAACACATAGAGAATCATCACAGCACGTACACTTGTCATTTGTGCAATGTGACCATCACCTCAAAACTCGGCATAATGACTCACAACCGTGTTAATCACATGGATCATGTAGATCTCACTTGCGAGAATAGcaattgcaaaaaattattccGTACGAAAGAGGATCTCGAGTCTCATAGAAAAGATCACAAGTATCATAATACACCAAACGTTTGTGATTTTTGTGGTGATACAGTTGAGAACAAGCTCAAACTGAAAATGCACGTTTTGTCGTTGCATCGTAACGAGATCGGCGTTTCGTGCGGAGTTTGTTTAATTCCCATGAAAGATCCTAAAGATTTGAAGAAACACGTTGAAGATGAGCACGAGGGTGTTCTCTTAAAACCGAATACTTGTCAGGTATGCGGTAAGCAATACGCATCAAAGTGGAAAGCATTCGATCACACAAAGAAATGTCATGGGAAAGTATTTCGTACGTGTAAACAGTGTTTGGCTGTTTTTATAACCGACGCTGATATACGTTATCATTACAAGCACATACACAACGTGCCAAAGGATCAATTGGCCGGATTCGAGAATCGTCTCGATATAAGGCCGGACGATTGTGAAAATTCAGACGTCGTCGTTAAGGACGAACCGGACGATTACGACTATGATGATACGCTCTGCGACGACGATATATACGATTTCAAACGACGAAGAAACAACACCGACACCTACGACTGTGACATATGTCCGGAAATATTTCTCAATCGGGAAACACTGGCTGATCATTACACGAATGTACACAACACCGATCCACAAAGAATGTTCAAGAGGCTGAAGCTAGAAAGTCCAAGTTCCAAGAGAAAGATGCGTATGCGCGAAAATTTCGAGTGTAAAAATTGTAGCAAACAATTTTGCACCAAGACTCTTTTTTGGAATCACATTAACGTTTGTACGAGACGAAATTCGAGCAAAAGCGAAGAGGCACGTTTGTATCCGACGTCGATTCTTGAAGCGCATCTcaagaacaacaacaagatCAAGAAGGAACCAGTGGAATCTGTGCTCAACGAATCAAACTTAAACATCCCAGATTTCAATCTCTTCGAGGACATAAATTTGCAACTTAGCGAACAGAAACCAGTTCCAAATCTCATGCCACTTTCGCACTTGAGACTATTGTCAAACATGAAGTGCTCGAGAAAAGACTCGAGAAAGGTGTACGACGAATCGACGAATACCGAGTGTACCTGCGAGGTATGTGGTAAGCCATGGCCAGCCAAAAAACATCTTTGGCAGCATCTCATACGTTTTCATCGTGCCGAAGCCGCTGTCACTTGTGGTGTATGTCTAAAACTCTGCAGAACTTACGACGAATTGGCGGAACATCTTAGAACAACCCACGAATCTATATTGACCTGCGAAGGCAATAATTTCACATGTAAAACATGCGGACGTTATCACAACGCGAGAAGCAAGCTCTTGCTTCATATGAGCATCCACATAAACAGCAACGGTATCGCCTGGTGTCAGAAGTGCGAGCAGAGCTTCGAGAGCGAGGAGAAGCTCAACGAGCACACTGCCAATTGCGATAAAAGTCAACCAGTTTACGAAGATCACAGCGTAGACATCGAGATGGATGGGGACATAAAGATCGAGGACGATGACGATAAGGGCAGCCTAATTGGCGATGGTGCTTCGTTGACGGGCGAGGGTGAGGAAGAAGTTGATTTCTCGGATCATCGAGTTGAGAGTAATTCTGAGAATACCGAGGATTCGGAAAGTAGCAGTAGTTCTAGCAGCGGTACCGATAGTGAAGACGAGGAAAATGAGCCAGAGGAGGAAATGGAATCGCGTACGAATAGCCGTGCAACCGGTGAAGTAAGTTATCACTCGGATAGCGAGGAGGATCATGAATCAAACGCTAGTGAAGAGATTCCTACCATCCCAAAGATTAAGGAAGAGATAGACAGTTCCATCGTTACCAAGTCTATCAACAAGGTAACAGAGACCGCCGAAAATGTCGTCGAGAAAGATGAGAAACACAATGAACGACGTGACAATGAAGGTAGTCAAGTTTCGGTATCTGCGaagagtaataaaaattggcagCTGTCGGAGGAAGAATCAAAAGAGTCTATCCATGGCACAACCGATGATTCCGATGACGACGGACCACCTATACTGAGTCCTATGATGCCATTGCCGATTGAAAACGCGACCGAGGAACGTGAAGATGAGATTAGTCACAAGCTCAGTCCGATGGTTCCGTTAAACACCGAACATGAGGTCAAAACTGAGTTGAATGCACCGGAAATCGATGAGATTTCGGATTCATTGGACAAAGAGGATGACTCGGTATCACCGAATTCTGAGCAATATTACGACTATGCTGCCTCGGAGGAACGTTCGAACGTTAGTGTCGCTGCTTCCAACGATGACATAGAATCCGAGGATGAAGTCGAGGCGGACACAGTCGAGGACGAAAATGAGGAAATTGACGACGAAGACAGCAGGATTCATATTGTTAATCCGGACGATGAGTATCACTCTGATAATAGTGACGATCCTGAGGAGTTGGccgaggaagaggaggaggaacaAGAGATCTTAGAGGACAACATGGAAATTGAGGGAGAAGCGGAGAAAGAGGTGGATGAGAATGACGAGGGACGAGAGTGCGAGAATGAGGAGGAGCAAGGCGATGATAACGATGTGGAGGAGGATGAGGAACAAGTTGGTGAGATCGatgacgaggaggaggaacaAATTGGGGTAAATGAAGATGCGGAGGATGAAGTCGGCGATGATGAGGCTGTCCAGATCCATAATTTAGATGGAACCGTTCTGATGGTTGCCAACGATGCTGATGGCAATCAAATACTGATTCAACAGAATGTATCTGACATCGATAACGAGGATTCTATTGGTGCTGTGACCGGTTATATCTACGAGGACGATGAGTATGATTTCGCAGGTTTTCAAGTGGAACAGAAGAATGAAACTTTCGAAGCGGAGAAACAAGAGGCCGAAGAGAATGAGATTCGAGTAGACGCCGATGAGGAATTGTCCGAAGAACgagaggagaagaaaattaacgacgaggaggaggagagtgaTGTACAAGACTCGAGTACGAGTGCCAAAAGTGATGTGTCAAGAACATAG
Protein Sequence
MEPSKERYNELCRLCASYDAVKMDIFGNEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLESSLPPGNNVAGNGIENDNEKYLELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADHDIEEIQDIRCIDDGFVEDAEDRKSDEYEMDMETNPSDFLEMTPMVTEDLDDTDGKKSQPVVARNSEVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVLTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVPYVQPDNKYKCKTCPKMYTNVTDLNKHGRICAGDRRKEKPNKKMPPKSIIDTSDLSSTDTDNDSKDYRNAEAKLSKNPQLTILKQALTKGESLKRDYEDRSSSGHRPVKVARTDNNEGDGQKRWYCEMCPRNFTTVDKLKEHETIHDAERPYICILCEKDFVLKTSLSRHIVSSHGVDPSPIVDSDKCLKKIAMTQLWRKKLIKPEGRKTIRDMSDSSEDAVSSHGNVIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLITHVAIHNVDPGYDPASFVQLNSNYYNENLNSNETNEHLMDFDAEDGEKVDCYICYKSFPNEDHLIRHQRNAHKTEPVIPSADVTIQSNGPGSGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSDDPTMKCEREDCGKIFATKTLRNEHAQHHLIQGASPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIKLSTHVKTNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEVDSLINNGTTMDMLNESTTHVKGATALPEAELTCEMCSDLTFESWEVLCNHRRLIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRYCMKTSASKDHLAAHIAKIHRYEPDSKLEVRETSNHGKQTTIEDEGVHHCDKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNVTITSKLGIMTHNRVNHMDHVDLTCENSNCKKLFRTKEDLESHRKDHKYHNTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHEGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFITDADIRYHYKHIHNVPKDQLAGFENRLDIRPDDCENSDVVVKDEPDDYDYDDTLCDDDIYDFKRRRNNTDTYDCDICPEIFLNRETLADHYTNVHNTDPQRMFKRLKLESPSSKRKMRMRENFECKNCSKQFCTKTLFWNHINVCTRRNSSKSEEARLYPTSILEAHLKNNNKIKKEPVESVLNESNLNIPDFNLFEDINLQLSEQKPVPNLMPLSHLRLLSNMKCSRKDSRKVYDESTNTECTCEVCGKPWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCRTYDELAEHLRTTHESILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINSNGIAWCQKCEQSFESEEKLNEHTANCDKSQPVYEDHSVDIEMDGDIKIEDDDDKGSLIGDGASLTGEGEEEVDFSDHRVESNSENTEDSESSSSSSSGTDSEDEENEPEEEMESRTNSRATGEVSYHSDSEEDHESNASEEIPTIPKIKEEIDSSIVTKSINKVTETAENVVEKDEKHNERRDNEGSQVSVSAKSNKNWQLSEEESKESIHGTTDDSDDDGPPILSPMMPLPIENATEEREDEISHKLSPMVPLNTEHEVKTELNAPEIDEISDSLDKEDDSVSPNSEQYYDYAASEERSNVSVAASNDDIESEDEVEADTVEDENEEIDDEDSRIHIVNPDDEYHSDNSDDPEELAEEEEEEQEILEDNMEIEGEAEKEVDENDEGRECENEEEQGDDNDVEEDEEQVGEIDDEEEEQIGVNEDAEDEVGDDEAVQIHNLDGTVLMVANDADGNQILIQQNVSDIDNEDSIGAVTGYIYEDDEYDFAGFQVEQKNETFEAEKQEAEENEIRVDADEELSEEREEKKINDEEEESDVQDSSTSAKSDVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00629281;
90% Identity
iTF_01057824;
80% Identity
-