Nmel009698.1
Basic Information
- Insect
- Netelia melanura
- Gene Symbol
- cicD
- Assembly
- GCA_964007305.1
- Location
- OZ023255.1:26248383-26251145[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 5.7 7.5e+03 -2.2 0.0 3 18 166 181 165 181 0.87 2 6 4.2 5.5e+03 -1.8 0.0 22 43 229 252 221 255 0.72 3 6 1.6e-08 2.1e-05 25.1 0.3 3 44 263 306 261 308 0.95 4 6 3.3e-11 4.3e-08 33.7 0.5 3 43 317 361 315 363 0.96 5 6 3.8e-12 4.9e-09 36.7 0.0 1 45 370 415 370 416 0.93 6 6 1.8e-07 0.00024 21.7 0.0 3 43 425 466 423 468 0.95
Sequence Information
- Coding Sequence
- ATGAGCGATCCGCCGGAAGATGATCTCGAGTTTCTCGATGAGATTAGAGCTCTCGAGGATGTGCTCGCGCAAGACGAAGCTGCCTCTTGGATCATTCGTACGGACGTTACGACGAATAATGAGATTGGAAATGATGGTTCGATCGTCTCGTCTAGAGGATTCGGCGAGGTGGAGccagaaaaaattgaaacctcGATAAACAAGACCAAGTCGCGTCATTCGGCCtatgaaacaaacaaagagTTGATCCAACTGCTCCGGGAAACAAGACGCGAGCTCGACACGATACTCGAGAGATGCATGGCTAATAAGGCattgatcgaagaaaaaattattgcgcATGGAAATAATACGAGAGGTACGAGGATTATCATTAGCGCAGCTGGTATGCCATATTTTAAAGACGTTAAGCAGTATCCAGCGCCCTGGAACAACGACGTAaagacaaagaagaaaaatggcgAGCTCCAGGTCGTGCAACTTCGTTACCCATGTCCATGGACGGTAAAGGATAGAAATATTCTTTGGCGAGCAATTCGTCAAGAGGCCGCAATGGCAATTCTCGAGAACGAAAAGCGGACGAATGCTATCGACGAGAGATCCTTTATCTCCTGCCCGACGAGGAGACtgaatttaccaaaaaattttaaggcaaTGATAGGCCCTCTGGGACAGCGAGAGTTCGATTGGTTGAAGATCGCGGCAATGGATTTCGACAACAGGCACACGCCGGGTGAGTGCAGAGTAATGTGGCAAGTATTTTTGCACCCGGACATAAACAGATACAGGTGGACCAGAGAGGAAGATGCGAAAATGGGCACATTGAGCAAAAAGTACAAGCTACAAGATTGGGATTCGATCGCCAATGAATTGAATACCGAGAGAAGCGGCTATCAATGTTTCATAAGATATAACAGTACCCATCGTAAGATATGCCCGGACGATAACACATGGAcgaggaaagaggaagagcgaTTGAGACGATGCGTCGAGAAATTCAAAATCGGTCATTATATCCCATGGGGCGTGGTAGCGAGATACATGAACGGAAGGAGCAAGAACCAGGTATATTATCGTTGGACCTATACAGCTGCGCCACATTTGAAAAAAGGCAGATTCACCAAAGAGGAAGATAGCACGATTATCCAAGCTATGAAGAAATATGGAAaagattttcgaaaaatatccaaatacGTTATGCCCAATAGGTCGAGCATTCAGCTGAGCGATCATTACCATACGCTCGTGCTGAGGCATCGAGGAGTCCCAAATGCCTGGAACATCAACGACGATACCCGTTTGCTCGCGCTGTACGATACATGTGGACCCGATTGGTCGAAAATTGTCCGTAAAATGGGAGCCGCCAAAACGAGAACACAGGCACGACATCGTTACAATGCGATTGTACGTTATTTCAAAAAGGGCATATCATTGTACGATATACCTCGGGATTTTCACAAATACGATCCGCTCTTCGTCAATGAAGAAAACGAGGATATCGATGACGATGAGGATGAGGATGAGGATGAGGATGAGGATGAGGATGAGGATGGGGAGGTGGGCGTTGTCGAGGTTATTATAGAACGACGGCAACGggacaaaatcaaaaataaaaaagcccCAAATTCTTTCGACATTGATGACGAactaatgaaatattttcagcTGATACCAGCGGCATCGAAACCCGgcagaaaacgaaaatattataaGGACGAGGAGCTTGACGTAACgaccaaaaaattgtataatattatgaaaacACTGGAGGCCCATCATCTTGCAATACCCGGAGAATTAGAGGGAATTAGAGGGCTCACGGAAAAGGAGAAACAATTGATCGAATCTCTCCTGTCGAGGCAGTCACGAAACTCGCACTTCCAAAACCAACCATATCGAACAAAAGATATTCAATACCGAACAAGCATTCGTATTGTTGAAAATGCCATCAGCAGCGAAAATCATTTTAGCCCCGCGTGCTCGGGCGATTGCAATCGATCCACGCAAAAATTGCAATCTCGCGACACCATAGACTACCACCCACCACCAAACATCCATCACTCTCAAATAGATATGAATATGGAAATGAGTACTTCGAGGGCGATCGTTGATCTGATCGGCGACCAACTCAATTCTTCATTCGACAAAAtcatcaaaatattattgaaaagaaTGATGATGAATCCTTTGAATCCGAGGACCGCTGAAAAAATTACTCGGCTACTCGGCCCGCCGAAAATCCCTTCCCCTTCGAAAGTTCTCTCCAATTTCGAAGCTACCAATTTACCACACGAGTATCCAGCAGCGTGCCAAATCTCGACCAATACGACCAATACGACCAATAATCAAAACAGGAACCAATCTgagacgaaaagaaataagacGTGGAGATCGACTATATTCGAAGGAATCATTCGAAACTTGGATCTGCCCGTTGGTTATATCGAACCTAGCTCCTATACGCTGCTTGCTTTGGAGCatattatttccaaaaataaacCTTGTATTCTGAAACCGGAGCTCACCGAGACGCCATCCTCGATAACCTATAACGGAATTAAATCGATCAACCTCTTGAAACAACGACTCGtacaattattcaaatatccTATTGGCTTATCGCATATTCTTCCACCAGAAAATTTACTCCagacaaaaatggaaaaaaacacGATCGAGACGAATGACACGACCATCGGCCAACGTCTCACTTACGATTCTACCAAAACTCCCTTACCTtccaataaaagaaaacgccTTTAG
- Protein Sequence
- MSDPPEDDLEFLDEIRALEDVLAQDEAASWIIRTDVTTNNEIGNDGSIVSSRGFGEVEPEKIETSINKTKSRHSAYETNKELIQLLRETRRELDTILERCMANKALIEEKIIAHGNNTRGTRIIISAAGMPYFKDVKQYPAPWNNDVKTKKKNGELQVVQLRYPCPWTVKDRNILWRAIRQEAAMAILENEKRTNAIDERSFISCPTRRLNLPKNFKAMIGPLGQREFDWLKIAAMDFDNRHTPGECRVMWQVFLHPDINRYRWTREEDAKMGTLSKKYKLQDWDSIANELNTERSGYQCFIRYNSTHRKICPDDNTWTRKEEERLRRCVEKFKIGHYIPWGVVARYMNGRSKNQVYYRWTYTAAPHLKKGRFTKEEDSTIIQAMKKYGKDFRKISKYVMPNRSSIQLSDHYHTLVLRHRGVPNAWNINDDTRLLALYDTCGPDWSKIVRKMGAAKTRTQARHRYNAIVRYFKKGISLYDIPRDFHKYDPLFVNEENEDIDDDEDEDEDEDEDEDEDGEVGVVEVIIERRQRDKIKNKKAPNSFDIDDELMKYFQLIPAASKPGRKRKYYKDEELDVTTKKLYNIMKTLEAHHLAIPGELEGIRGLTEKEKQLIESLLSRQSRNSHFQNQPYRTKDIQYRTSIRIVENAISSENHFSPACSGDCNRSTQKLQSRDTIDYHPPPNIHHSQIDMNMEMSTSRAIVDLIGDQLNSSFDKIIKILLKRMMMNPLNPRTAEKITRLLGPPKIPSPSKVLSNFEATNLPHEYPAACQISTNTTNTTNNQNRNQSETKRNKTWRSTIFEGIIRNLDLPVGYIEPSSYTLLALEHIISKNKPCILKPELTETPSSITYNGIKSINLLKQRLVQLFKYPIGLSHILPPENLLQTKMEKNTIETNDTTIGQRLTYDSTKTPLPSNKRKRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -