Ncom004263.1
Basic Information
- Insect
- Neria commutata
- Gene Symbol
- pnr
- Assembly
- GCA_963457695.1
- Location
- OY735245.1:49164118-49168233[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 1.1e+04 -3.4 0.5 1 5 440 444 440 452 0.62 2 2 2e-18 8.4e-15 54.5 8.9 1 35 493 526 493 527 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCGCAGacacagcaacaattgcagcagcagcaacatcaacagcaccaacagcagcagcagcatcaacagcaacaacatcatcaacagcagcagcaacaacagcagcagcagcaaaaacttgtcaagcaacagcaacaacaattgctggaTAAAATCAAAACGGAGGCGAACGGCAATGAACTATtaacacagcagcaacaacagcaccagCAACTAAGTCCCCCAACAGCATTAgaggaacagcagcagcagcagcagcagcaacaacaacaacaattaactAGTCATACGCCACAGCAGACTCCCACCCCCACGGCCAGCGTCGTCGTGGCTCAAGCCAGTGATAACTTAATTCCCATCGCCCGCACACAGCAGCGCAGAATCCTCACCACCGCGGGCACATTAGAAGTCAACGAGCAGCGCGAGCCGGATCCGGTCAACGACTCCCAGCCGGACTACCATCATCACAGCTCGCCGAGCGCTACTGCCGCCGCTTACGTGCAGATGGCGCCGCGCAACGAAGAGCAGCCGCCGCCAGTCACGACCGTCTACACGTACGCCACGGAGTCGGGCCAGCAGATATTGTGTGCCGAGAATGTGGGATCCATCAAGATCGAGCACATCGACAAGGAGCAGGAGCAGTCGCAGGAGCCACAGCACCTGCAGCACCAGCAGTGCCCCACGCCGAGCGTCAACTATGCGGATACGATTGTCGTCTCCTCAGCTGCACTTCAGCATCACAACTCCCACCACCCGCACAACTCGCCCGCCAACAATCCGGGCCATCCGCATCCCGTCGCCCTGCACAGCAATCAGGCGGGCACGCCCTTGCCCTTCGACGACGATGGCCGCTTCGGCGGCACCATTGTGGACAACGGCAACGGGCCGCCATCGACGGTGTACTACGGCTCCTCCGTGGTGGATGCCAGCACACACGCCAACGAGGACAAGACGTTCACGGATCTGGGCAGCTCGCCGTACCTCAACTACGTTCCCACCTCCTATTCGCTGGGCCAGAGCAACGTCATGTACAGCGTGCCGGGAACCGGGCAGCTCATCTGCAAGTCGGATCCCAACTTGAGTTCGGCGCGACAAGCCAGTCAATATCCGCTCTACGACGCGGGCGTGCAGGAGCAGCAGGCCGTCTGGTCCACATCGGCCGTCGACTATCAGAATGCGGGATTTAATAACTATCCCCATCAGGTGCTGGAGGACTATGGCGCCAGCAGCATGGGACCTGCGCATTGGCATCCCACCAGCTCGCTGACGACGTACGGCGCCGCGCTGGACGGGCCCATCACGGAGCTGAAGTGCATGAACTGCAACTCGCCGTACCAGCGCAAGGGCAACGACTACTACTGCCAAAGCTGCTGCAATGCGTCCGTGGTGCGGACGACGGTGCGCATGCCGGCGCGCCAGGCCAAGCCGAAGGCCTCGGCGGCGGCCAACAACCGACGCACCGGCGTGCTGTGCGCCAATTGCCAGACCACCACGACGACGCTGTGGCGCCGCAACAACGAGGGCAATCCGGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACCAGAACCGGCCGCTGAACATGAAGAAGGATGGCATCCAGAAGCGCAAGCGCAAGCCGAAGAACAATGGCGTCGCCGTCACAAAATCGCCGCTGCCCAGCATGTCGCAGGGCGTCAGCCTTATGATGAACAGCGGGCCCATGTACCCCTCGCAAGTGCGAGGCACCCTAAATCCTATTCCCGGAATCATTCAGCAGGCCGGCGACCCGGGGGAGCTACACAGCATGCCGATCAGTGGCCCGCGCGGAGTTGTCATACCGCAGCCGGAAGTGGGCTCCCTGAACATGATGACGCATCATCACGTCACCTCCGACAGTCACTCGTCGTACAATAATTCACCCTCGCAGAGCCAGTCGCCGCATCTGCCGAACTCGAGCACTCTAAATCGGCAGATCACACAAACaGTGCCTCCGATTGATGGTGCACGCAATACCAACGCCGAAATACCCACAAGCGTCATCACGCGCACCGGACTACCCGAACGCTCATCGAATAACTAG
- Protein Sequence
- MEAQTQQQLQQQQHQQHQQQQQHQQQQHHQQQQQQQQQQQKLVKQQQQQLLDKIKTEANGNELLTQQQQQHQQLSPPTALEEQQQQQQQQQQQQLTSHTPQQTPTPTASVVVAQASDNLIPIARTQQRRILTTAGTLEVNEQREPDPVNDSQPDYHHHSSPSATAAAYVQMAPRNEEQPPPVTTVYTYATESGQQILCAENVGSIKIEHIDKEQEQSQEPQHLQHQQCPTPSVNYADTIVVSSAALQHHNSHHPHNSPANNPGHPHPVALHSNQAGTPLPFDDDGRFGGTIVDNGNGPPSTVYYGSSVVDASTHANEDKTFTDLGSSPYLNYVPTSYSLGQSNVMYSVPGTGQLICKSDPNLSSARQASQYPLYDAGVQEQQAVWSTSAVDYQNAGFNNYPHQVLEDYGASSMGPAHWHPTSSLTTYGAALDGPITELKCMNCNSPYQRKGNDYYCQSCCNASVVRTTVRMPARQAKPKASAAANNRRTGVLCANCQTTTTTLWRRNNEGNPVCNACGLYYKLHNQNRPLNMKKDGIQKRKRKPKNNGVAVTKSPLPSMSQGVSLMMNSGPMYPSQVRGTLNPIPGIIQQAGDPGELHSMPISGPRGVVIPQPEVGSLNMMTHHHVTSDSHSSYNNSPSQSQSPHLPNSSTLNRQITQTVPPIDGARNTNAEIPTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -