Basic Information

Insect: Neria commutata
Gene Symbol: -
Assembly: GCA_963457695.1
Location: OY735245.1:13255461-13262811[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.68 63 4.8 1.5 1 23 1595 1618 1595 1618 0.94

2 13 0.7 65 4.7 1.1 1 23 1797 1819 1797 1819 0.94

3 13 0.0022 0.2 12.6 4.9 2 23 1822 1843 1822 1843 0.97

4 13 3.1e-05 0.0029 18.4 0.2 3 23 1851 1871 1849 1871 0.98

5 13 8.1e-07 7.5e-05 23.4 3.6 2 23 1878 1899 1877 1899 0.97

6 13 6.4 5.9e+02 1.7 0.4 5 23 1912 1930 1910 1930 0.96

7 13 3.9 3.6e+02 2.4 5.1 3 23 1937 1958 1935 1958 0.93

8 13 0.044 4 8.5 0.1 2 23 1969 1989 1968 1989 0.96

9 13 2.3e-05 0.0021 18.8 0.8 1 19 1995 2013 1995 2017 0.94

10 13 1.9e-05 0.0018 19.1 0.8 1 23 2025 2047 2025 2047 0.98

11 13 0.00012 0.011 16.6 7.6 1 23 2053 2075 2053 2076 0.96

12 13 0.0011 0.1 13.5 6.5 1 23 2081 2103 2081 2103 0.98

13 13 0.0023 0.22 12.5 5.2 1 23 2109 2131 2109 2132 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.68	63	4.8	1.5	1	23	1595	1618	1595	1618	0.94
2	13	0.7	65	4.7	1.1	1	23	1797	1819	1797	1819	0.94
3	13	0.0022	0.2	12.6	4.9	2	23	1822	1843	1822	1843	0.97
4	13	3.1e-05	0.0029	18.4	0.2	3	23	1851	1871	1849	1871	0.98
5	13	8.1e-07	7.5e-05	23.4	3.6	2	23	1878	1899	1877	1899	0.97
6	13	6.4	5.9e+02	1.7	0.4	5	23	1912	1930	1910	1930	0.96
7	13	3.9	3.6e+02	2.4	5.1	3	23	1937	1958	1935	1958	0.93
8	13	0.044	4	8.5	0.1	2	23	1969	1989	1968	1989	0.96
9	13	2.3e-05	0.0021	18.8	0.8	1	19	1995	2013	1995	2017	0.94
10	13	1.9e-05	0.0018	19.1	0.8	1	23	2025	2047	2025	2047	0.98
11	13	0.00012	0.011	16.6	7.6	1	23	2053	2075	2053	2076	0.96
12	13	0.0011	0.1	13.5	6.5	1	23	2081	2103	2081	2103	0.98
13	13	0.0023	0.22	12.5	5.2	1	23	2109	2131	2109	2132	0.96

Sequence Information

Coding Sequence: ATGGTGGAAAACGTGCAGTGCCCTGTGTGCACACTCTTCCTGCACGCGGGTATGAACCTCTCCGATCACTTGGAGACGCATCCCAAGGAGCAGGTGATCAAGGCGCTCGTACAGCTGACCATGACAGGTGGCGCAGTAAGCGGTGCTGTGGCAGCAGCGCTGTGTCAGGGCGAGAAAAAACCGGAAATTGATGTCAAGTCCGGGCCGGATAAGGAGCCGGATTTGAGTAATAGCAATTCCGCGAGCAACTCCTGCGCGTCGCAAAGttctgcaacaacaacgccaacagCGACTTCGAACCAAAATCCGAATTTCGCTGCAACATTTTCAGCAAAAACAATaccacaaaagcagcaacaacagcatgctGAGGACAACATGTCCAATACGCAatgtgctgctgcagctggagGTGTTAATAGCGGCGATGGCTGGAAGCCTGTGTTCAATCAGCAAACTCCAAGTGCTACAATGCAATCATATCAACTTGGTGGGAGCAGCAGTGTGGTTTCTGAGATCGCGTCGGCAATGCCATCGGATTTTAGCACATTTGCCGCGCATCGctacaaacagcagcagcagatccAAACTGCAAACAGTCAAttacaccagcaacaacaagcgccGCTGCTACAACAACATGTTTCTGTGGCCGCACACGCACATCGGCATGTTGCTAGCTCTCTACCGCCGCCTCCACCTCTGCCTGCTGCCCAGCAAATGTTGCCCAACACATTTCAGACGCTGCAGCACACGTTGTTTACTGCTTCACCGTCAGCGACAAACACAAACTTGCAGCTCCATttacagcaacagcatcaacagcagcagcatcaacagcagcaacatcaacagcatcaacagcagcaaccacaaaatatgaaaactatATATTCCCCAAATTTGCCTCCGCCACCTCCGTTGCAGCTCTTCTCCTATCAGCCAACAACACAGTTGCAACATCAGAAACCACCGCCCGCGTATGGCACCGCAATCAGTCAAATTCGATCTCAGCACAACCAAAACAAGCAACATACTGCTGTCGCCATTCCGGCTGTAAcatcacagcaacaacaacagcacttgCGAATTGCACCTCCACCGTCATCCCACCACACTgcaccaccgccgccgccgtcaAACGCAGTAACCACAACGAATCACTTGTTTCAAGGAAAAGCCGCTGCTGAACTGCCACCACCGCCgctaccagcaacaacaatatcagcAGCTGGCCAACAGCCAAAGTATTTGGATGATCTTATGCAGCAGAAACAAccaccaccacaacaacaacagcagcagcaacactttgTTGCCAGCATTTCCAATGGCACAAACAGTCAAGAAAAACTTGTAAATGCCTCGCAACGTGCAACACCATTACTAGCAACTACAGCTACACCAATGCCGACTGCACAAGcgccgcaacaacaaacactagcTCCCTCCGTTGTCGCCTCAACATCAAATAGCATTGCATGCGTTGGCTTCAATTCCTCTGGCAACAATAACAGCCGTCAAACGAATTCTCCCTACGCCGCACTCTTTCCACCAGCGGCCCCCTCGCCTTCATCGGTGTTGCGTTACGCTGAGTCGCCCGTGGCGCACTACCTCGAGCGTGATAATGGCGACTTCATTGTGCAGGAGACACCAAAACACATCGTTGAGTGCGTCGAGAAGGACAACGGCGAATTTTCAGTGATTGAGCGCATCTATCAGTCGCCGCCCAGTGTTCTGCACATACACGACGATGATGAAGATGACGACGAAGAGGCGGAGGAAGATGATACTAATGAGGCTGCAGAGGAAGATGCTGCCGAACATATAAGAACAGATAAGAATGAGAGTGACTCATGCTTGCTAGACGAACACCAAGATTTCATGAGCGCTGCTAGCGATAGTGATCAGGAAGAGAGTGATGCTGTGGATCAGAAGACGAAAAATGAGCTTAGCGGGAAGCAGCCGAGTCAAGAAACTTCAGCCAGCTTAAACGCGGCTAGTGGAGGTTCCAATTCCAACTCAGCTATGAATTCCAACTCAAATAATGCAGTTCCGACCGCACGCAGAAAATCTTCCAAGAACCACATAACCGTACTGAGCGACGTGCAATTGGATCTGAAGGAATACTTGGATTTAGTAGGCAACATTATAGCGTCTAGCAAAATAGCAGCGCAGCGTGCGAAGTTTGCCGGCACTGCGCCAATGCCACTGCTCAAGGTGGAAAAGGAAGAACCACCCGATGACTATGAAATGCAGGAAATGCAATCAGCAGCGGAGGAGGAGGCAGAGGCAGACGGAGAGCAGCAGTTCCAACAGCAAGACGACGATGATAGTCGCATGGAAATAGAGGAGCAGGAGCAGCCGCAAAATGAATTGGAAGCAGCGCCTGCAGTTGAGGTCAAAACCGAACCACCACCTACAATCGCCAACAAACATGAGACTGATGAATTAGTTGAAAACAATTGTAGTAAAATTGAAACTAGCCTAAATGAGAAGAAGAACGCTGAAAACtccacaacaataaaagcagaagCCGAGCTGAAAAGGGAGAACTGGGAGTACATTGCGAATGAGCATAATGttgcagcagtagcaacagcagcaacgtgTGCAAGTCATGTGACGAGCGTCATACGCATGGCAACAACtagtcaacagcagcagcaacaacatcaacctcaacatcatcaacaacaacaacaacaacaccagcagctGGCAATAGAAACTAATGCTGCCGAACGTTATGGCATTTTTACGCCTTGCACAAGTGCGCAGCATAAGGGTCCAAAGAAACTAGTTATCAAGCCAAAATCCATAAAGACTGATACAAATGCCAACAATAGAACAGCAATAAAACAtgaaatagcaacagcaacaacaacaacaagcacaacaacaacaatcaaaatgTCTAATGCCGATGATTCACCAACAACATCGGCGAAAGCGCAGCAACAGAAATTTAATCAAAGGGAACAAAAGCACCCAcagcaagaaaaacaacaaaaacaggaAGCAGCAACACTGCCGGCAGATGTGTTTATCAAGAGCGAGCCGAATGCGACGACATATGAACAACATGCCATaggcagcagtggcaacagcaacatcagcatTTTAGAGCAACATTTGAAGTTGGgtgtgcagcagcaaaaacaacaacagcaacataaatTCGATCTTGTATGCAAAGAGGAGAAATTGCATGCCCAGCAGcaacaggagcagcagcaacaacagttaCCACCCCAAAATGAAGCAGAGCAGCCGAAGCCTTTGCTTAAAGTGGAGCCGGCACACACGGATTTGATTGAGTTACAGACAACGCAAGAACATGTTGCTGACGATGCGGCACGCGTGTTGCTCGATTTCGCCAATTCGAAAAAGCACACAAACTCAGCAGCGAACTTCCTTTCATCCACATCGATTTTTTCCACTGCCGCAAGTTTGGCTGccacaataacaaaagcaacaaattcagcagcagcagcagcaacgacagcTGTAGGCGATTGCAGCAGCTTGTTAGTTTCCTCGCTGCGCTGCGATGACGAATACATTGCTACCGATGGCAGCGACGTGGTGCAGGAGATCGTAATATCCTCCTCGTATTCCTCGCAATCGGCATCCGACGTGGTCCATTGCTCCTCGGCTGCCACCACTAACGACTCGCACCACAATCAGCAGCCGCAACAGCagagccaacagcagcaacaacaacagcagcacagctTCACCGATTATGCTTTCAGCTTCCTCTATGGCGGCGGCAATGTTGCGCAGCAGGTGGACGCAAAGGGCATCAGCTTCTCGCCGATTTATACACAGGCGCAGGACACAACAACCGCCGCCACGCTCGCCTCCGGCAGCAATTCCATTACCATTGAGGATTCCAGTTCTACACACACCACACACCGACAACAACACAacggccaacaacaacaacaccagcagcagcagaatcgCTTCGATGCGGCTCCCATTTCGCAGTGGTACCACCACGCGGCTTCCACGGCGAATTCCGATTTTGAGGCGGCGCTTGCTGTGGACTGCAGTGCGGCTGTGGATGGCTGCGGCGACGTCGTGGGCAAGTATTTGGACTTGGACGCCTGCAAGCGCGAGAGTCTTGTTGGTGTGCAGGCGGCCGCGTCGTCTACTTCGTCCTCGTTCGCCGCTGCCACCGAGAGCAGCTTGGCCGGTGGCTGCACTACGGACGGACTGAACATTCGCACCGATGAGAAGATGCCCGCCAAGGGAGAGATCTCCGAGCAGGAGAGCAACTGCGATATTGAGAACTCTTGGAGCCAACCGATGTACGGCGACATTTCGGCGCGCTTCTTCAAGACCTCATTTCCCGGCATATTCCAACAGGAGAATGGCTGGAACAACGATGAATACTTTACGGTGCACGACTTGAGTGCGTCGACAAACGCTGTCAGCACAGCAGAGCACCCGGACGTACTGCCCTCCACGTCAGCTGCGACGAACAAAAAGAAGCGCAAACGCGATACGCACGCGGAGAAGGCGCCTGCCAGCCGTGCAAAGCCAACATCCACAATCACTTCACAGCAATTCGTGGTGCACCAGCAGCACCCAGCTCAGCAATACAACTTGCAAGTGccccaacaacagcaacaacagcaagctcACAGTTCCATTTTGATGGCTGGTCCATcgactgctgctgcggcggctgctgccgttgcctCCTCCAGTTCTGGTCTTGCTGCATCGGCGGGTGGCGGGCTGCAAGTGAAGCCGCCACGCAAGAAGATCTATCAGTGTACTCACTGCATGGCCGAATTCTCCAAGCTCAAGGATCGCAATTCGCACATGATCGACGAGCATAACTACGTGCGCCAGAATCGTCGCTTGGTTTGCTTACGCACGGGCAATAGCACGGCTACGACGGCCACAATCACCAGCGGTGAATTGGCTAGCACAACTGCGACAGCAGGCTCTTCCTCTAGTGGCAATCTGCTCTTGCCACAAGTGGCCGACATCATGGAGGACTCGAAGCAGGCCATTGTAAAGATCGAGGTGGAGCACGCGGAGCAGCAAGTCGCGCTGACAATCGGCGCAGGTGTGGCGCCAAAATCGGAGTACATCGACGAGAAGGAAGCCTTGGCATTGGCGTCCAACTCGCCGGACAATGTCACTGCAAATAGCGTCAGCACAATTGCCGCCATTAGCGGCGACGCCAAGAATGGCGAGCTCTCCGCGGAAGACAGTAAACTGAGCTTGCAGCAGCCGCTCTCCGTCTCGACGCCTGCCACCAAGTTGGCCACGCTCTACCGAATGCTGGTCTCCTACAACATATCCACGCTGAAGCAGAACCAACAGCTGTCGGAGTTCGAGGAGAAGTTCATCGAAACCTCTATCTTTTTCTGTTACATCTGTCGGCAGAACTTCACCTCGGTGAAGCTGTACGATGCGCATCTCACCGAGCATCCGGCCGAGTGTTTCACATGCGGCAAGAAATTCCACCGCTGGAAGAACTTCTCGCTGCATCTGAAGCGGCATCTGGGCTGGAAGGAGTTCGGCTGCAGCGTGTGCGACAAGAAGTTTGTGGTGCGCAGCGCGCTCGTGGAGCACATGCGCATGCATACCGGCCTCACGCCGCTCAAGTGCAAGATTTGTGGTAAAAACTTCAAACGCTACTCGAACCTCACACAGCACCGCAAGCGGCACGGCAAGCAACTCATACGCAAGAAGGAGTACGTCTGCCATTGCGGCGAGGTATTGCCGTCGAAGGCGCGCTTCCTCTGGCACAAGGAAACGCACGACCCCAAACCCAAGTGCTGCCCCTACTGCTGTGACCGTTTCGTGCACGCCAACTCGCTGAGCCGGCACATACGTCTCGCGCACTCGGACAAGTTCGACTACACCGCACCAATGGAGTGCCCCATGTGCAAGCAGATCTTCGCCAAGTCGTCGATCAAAGCGCACATGGCCACGCACTCGATGGACACGCAGCACGACTGCCCAATATGCAACAAGTCCTTCTCCACCAAGTGGAATCTGAAGATACACTCATGGGTGCACGCCAACCGCACCGCCAAGCCCTTCAAGTGCGAGCACTGCCCCAAAGCGTTCGTACGCGAGGTCGACTACAAGAACCACATAAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTATTGCGGCTGCAAGTTCATACGCAAGTACAACTACATGCGGCACCGGCGCGAGCACCACGGCAATAAGAAATTCACCTGCGACCTGTGCAAGAAGTCCTTCCATCGGCACTACTATCTCATCGAGCATCGGCGCATACACACCGGTGAGCGGCCCTTCGTCTGCACCATTTGCGGCAAGAGCTCCACCACGAAGACCAACCACAACAAGCATCTGAAGATACACCACTCCCGAGATCCGTTCACAGTGGAGGCGTAA
Protein Sequence: MVENVQCPVCTLFLHAGMNLSDHLETHPKEQVIKALVQLTMTGGAVSGAVAAALCQGEKKPEIDVKSGPDKEPDLSNSNSASNSCASQSSATTTPTATSNQNPNFAATFSAKTIPQKQQQQHAEDNMSNTQCAAAAGGVNSGDGWKPVFNQQTPSATMQSYQLGGSSSVVSEIASAMPSDFSTFAAHRYKQQQQIQTANSQLHQQQQAPLLQQHVSVAAHAHRHVASSLPPPPPLPAAQQMLPNTFQTLQHTLFTASPSATNTNLQLHLQQQHQQQQHQQQQHQQHQQQQPQNMKTIYSPNLPPPPPLQLFSYQPTTQLQHQKPPPAYGTAISQIRSQHNQNKQHTAVAIPAVTSQQQQQHLRIAPPPSSHHTAPPPPPSNAVTTTNHLFQGKAAAELPPPPLPATTISAAGQQPKYLDDLMQQKQPPPQQQQQQQHFVASISNGTNSQEKLVNASQRATPLLATTATPMPTAQAPQQQTLAPSVVASTSNSIACVGFNSSGNNNSRQTNSPYAALFPPAAPSPSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLHIHDDDEDDDEEAEEDDTNEAAEEDAAEHIRTDKNESDSCLLDEHQDFMSAASDSDQEESDAVDQKTKNELSGKQPSQETSASLNAASGGSNSNSAMNSNSNNAVPTARRKSSKNHITVLSDVQLDLKEYLDLVGNIIASSKIAAQRAKFAGTAPMPLLKVEKEEPPDDYEMQEMQSAAEEEAEADGEQQFQQQDDDDSRMEIEEQEQPQNELEAAPAVEVKTEPPPTIANKHETDELVENNCSKIETSLNEKKNAENSTTIKAEAELKRENWEYIANEHNVAAVATAATCASHVTSVIRMATTSQQQQQQHQPQHHQQQQQQHQQLAIETNAAERYGIFTPCTSAQHKGPKKLVIKPKSIKTDTNANNRTAIKHEIATATTTTSTTTTIKMSNADDSPTTSAKAQQQKFNQREQKHPQQEKQQKQEAATLPADVFIKSEPNATTYEQHAIGSSGNSNISILEQHLKLGVQQQKQQQQHKFDLVCKEEKLHAQQQQEQQQQQLPPQNEAEQPKPLLKVEPAHTDLIELQTTQEHVADDAARVLLDFANSKKHTNSAANFLSSTSIFSTAASLAATITKATNSAAAAATTAVGDCSSLLVSSLRCDDEYIATDGSDVVQEIVISSSYSSQSASDVVHCSSAATTNDSHHNQQPQQQSQQQQQQQQHSFTDYAFSFLYGGGNVAQQVDAKGISFSPIYTQAQDTTTAATLASGSNSITIEDSSSTHTTHRQQHNGQQQQHQQQQNRFDAAPISQWYHHAASTANSDFEAALAVDCSAAVDGCGDVVGKYLDLDACKRESLVGVQAAASSTSSSFAAATESSLAGGCTTDGLNIRTDEKMPAKGEISEQESNCDIENSWSQPMYGDISARFFKTSFPGIFQQENGWNNDEYFTVHDLSASTNAVSTAEHPDVLPSTSAATNKKKRKRDTHAEKAPASRAKPTSTITSQQFVVHQQHPAQQYNLQVPQQQQQQQAHSSILMAGPSTAAAAAAAVASSSSGLAASAGGGLQVKPPRKKIYQCTHCMAEFSKLKDRNSHMIDEHNYVRQNRRLVCLRTGNSTATTATITSGELASTTATAGSSSSGNLLLPQVADIMEDSKQAIVKIEVEHAEQQVALTIGAGVAPKSEYIDEKEALALASNSPDNVTANSVSTIAAISGDAKNGELSAEDSKLSLQQPLSVSTPATKLATLYRMLVSYNISTLKQNQQLSEFEEKFIETSIFFCYICRQNFTSVKLYDAHLTEHPAECFTCGKKFHRWKNFSLHLKRHLGWKEFGCSVCDKKFVVRSALVEHMRMHTGLTPLKCKICGKNFKRYSNLTQHRKRHGKQLIRKKEYVCHCGEVLPSKARFLWHKETHDPKPKCCPYCCDRFVHANSLSRHIRLAHSDKFDYTAPMECPMCKQIFAKSSIKAHMATHSMDTQHDCPICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDYKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFVCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -