Basic Information

Gene Symbol
TRERF1
Assembly
GCA_963457695.1
Location
OY735245.1:10030928-10041515[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-09 8.6e-06 26.2 0.0 2 45 1588 1631 1587 1632 0.93

Sequence Information

Coding Sequence
ATGTGCAGCGCTTCTGTCGGCACCGAAGGTTCCGTCACGCTACAGCTGAGAGATGCCAACTCGTCCTCCGATTCGAATCAGTCACCCGCGCCGGCGTGCCTAGACAATGCGTTGACCATTGGTTATCCGGATCCGGATATGTTGGCCGATGTCCTAGGCACATTACAGGCAGCCTCGCTTAAGAATCACAGTACAACCACAACCACCACAACAACCAAACTGAGCAAcagcagttgcagcagcagcagcaatagcagcaataacaacaacactaataACAAAATCACCATCAGCCGTCGCAACTCAAGTGCACCCAGCAAGGAgcccaacaacaaaagcggtGTACACACCGTCTCCACATCGACAAACACCACTAACAAAACCAACAGCTACATCAAGAATTGCCTAatacgcagcagcagctgcagcaacacgACTAACGTCACCTCGCTGGCTCAAATaatgagcaacagcagcaccagcTCGAGCTCCCTACTCAACAACACGacgaacagcaacagcaactgcagcagcaacagcaacttcagttcgagcagcagcagcaacgacagcaCCAACAgcgtcaacagcagcagcaacaacagtagcaGCAATCATCTCAAGTGTGTtggcaataaaattgttcCTGGCAGCGCAAATCCACCGACAGTTCTGAAGAAGAATAGACCGAAGTTATCGTCGCCCACTCGACATGGACCGCAACAGTGTCAGATTTGTAGCAAGATCTTTGGAAATGCATCTGCCCTGGCCAAGCACAAATTGACACACAGCGACGAGCGGAAATACGTGTGCGCCATGTGCTCGAAAGCGTTCAAGCGACAAGATCACTTAAACGGCCACATGATGACACACCGCAACAAGAAGCCCTACGAATGCAAGGCGGAGGGTTGCGGCAAGTCCTACTGCGATGCGCGTTCGCTGCGGCGACACACGGAGAACCATCACTCGGGCATCATCACGCCGCAGAACCAGACGCTCTCACCCACGGCTGGCACACCCACCGGCCTGAGTCTGTCACCGGCCACAGCGAGCGGCGATGCCAGCTCACCAGATGGCGCCACTTGCATACGCACCTACATCTCGAGCGGCGGCACGGTGGTGGACGCGGCCACAGGCGTTGCGCTAACCGAGGAGCAGATCAGAGCCATTAACTTGCCCATCAAGACAGGCGTCACGCTGCTCTCGCCCACCTCGTCGTCGTCGACTTCATCTGGAGGCACCTCCATGTCAGCCAACTCGCCAACTATCGCGCTCACCGATGCCAATTCCGTCGAGGGGGAGGGTCTGACTCGCGAGCAGCTCGACCTGATCAGCAAGATCATGCAGCAGACCAAGCAGACCAGCGCTCAAGTGACCGTCTCCTCGCCCACCAGTGTCAACTCGTACAAAGTGGACACGGGCACTGTGCCCGTGCAGGCCATGAGCCCGCAGAGCAACTTGCAGAGCAGACCGCGCACCTGGAATATGCAATTGCTGAACAGCTCGCAGAATGTCTCCATTACCGTGGACGAAGCCACAACGGATAGCGCGCCCAGCACTGTTGCTTCGCCGATCGACACCAAGGAGGACGAGCTCGGCCAACAGCTGATCGCTGCCATCAATCCGAACTTGCTGAACATTGTGAAGATCGACCAGAAGCCGGTCGAGTGTAATTTATGCCACCGTAAGTTCAAAAATATACCCGCCCTCAATGGGCACATGCGTTTGCACGGCGGCTACTTCAAGAAGGACCCCGACACGAAGAAGAGCGAGAAGAAAGAGCCGAGTGGGCCGCCGCTGCAGACCGCGAGCATCGGCGTGAGAGCGCTCATCGAGGAGAAGATTATCAGCAAACGCAGCAAAGATCTGAACAAGGGTGCCTTCGTAGTTCCTGCACCTCCTGGAAATTTAGCCAGCACAGCCAACTCCATTAGACGATCGATTAGCGATCTGGAGAGCTTCCTCAGCCCCAAGTCACACTCCAGCGCCAGCGCGAGCAGCAGCTGCATCAGCAGTAGTAGCAACTCCCCCCACGCAGCTGCAGCCAACATGCTGCCCGCGGCGACCACCATCAAGAGCAGCAGTCTGAGCATACAGCAGATGGCTCTGCCGCAGAGCATTGAAATCTTCAGCACGAAGCAGCAGAAGATGCTGCACAACGTAAGTGTGGGCGTTGGCACCACGTCCGCGCTCACCACCAACGCAACGACATGCTCGGCAACGATGAAATCTACGGCAACGACTTCACACACAACGACTACCAAGAGCACATCAACCGACCCGAAGGATTCCACACTCATCGAGCTGCTGAAGCGCGGCACGCGCATCGCCGTCACCGCCAAGAAGCCGCACCTTGCCAACagtacaaatacaaattcgGCAGCTgccacaaacacaacaacaacgctagCCACATCACGCCACATTATTGCAGGCAACAATCGCACAGTGATAATTCCCTCGGACGTGCAGGTGCTGCCCAGCAAGTTGAAGTCGTCCAACGGCAGCTCGTCGCGCGCCTCGACGCCAGCAACGAGCATCTCCCTGAGCGAGGCGACGCCGCTCTCGCTGACCATTTCGCAGAGCGGCAGCAGCTCCGGCGACGTGTACACACTCACCTACTCCAGCGACTCGGCCGGCTTGTTCGAGGACGCCGAAGTGTACAACGTGTGCGACACGGAGATGTTGCTGCAGACAGTTGACTCGATGCAGCTGCTCAACGAGGCGGCCGATCAAATCAAAAGCCCACATTCCGAACAGTACAGCACAGACGGTGGCGGCGGCAACGGCAGAGGCAGCGTTGAGGAACTGATCAAGATCGAGTCGGACGCCGCCAGCTTGAATTCCACAGGCAATGCCATGCATGCGCTGCCCACCAGCTTGCCCACTTTCCAGCACTTCCATTCCAAGGAGCTGCTCATGCACAGTAACTCCCAGCTGCAGGCTTCGCTCACGCTGCCGGCAGAGCTGAAGCAGCAACTCGTCTCCATGTCTTCGCCCACGCACTCACCCCTGGCTTATCCCACGCCACCCTCCAGCCATGAGAATGTCACACAGTCCTCGCCGTACGTGGAGgaagcacagcagcagcagcagtttgtGGAGTCGGCGAATGTCTTCTTCAATGAGAAGTGCAACGCGGACTTTCTGGCGCAGGCCAACGAGGCGGCCTTCTTCAAGTCGAATGCCGCCGAACTCTCCGAAAATGAGAAAATACTCAAGCTCAAGAGCGTGCTGGAGGAAAGCGCATTCGACAGCGCCATCAAGGTGGAGGACTTGCTCGCCGGCGCTCAAAATGACACCGAATGCGATCTGCGCGAGTTTGCGGAGACGAATCTCTCCTTCCTCGACGAAGATCAGGAGTTTCTGAACGACTCACACAACGCCACTTCGCCGCTGTCGGAGTCCTTCTTCACGAGTGGCATCGGCTCCGCCGAGGAGGTGAAGGAGGTGTTGCGCGAAGTGCTGCCCGAGGAAGGCGTCAATCTGAACTGTGAGCATCAAGGCGAGAACATCATCGACTTGTATTACTTGCCGGGTCTGGGGCTGCAGTCGCAGATGATGCCCAACTCGGAGGATCCGCTGCTCTCCTCGTCGCCGCGCGATTTCGGACAACAGCGTTTGCAGCATCAACAGATCATACAATtgccgcagcagctgcaagtacaacaacaacaacaacagcaacagcaaacaacagTCTATGCCGCGCAGCAATTGGAACAACAACCACattcacagcaacaacaattgtcccaaggcgagcagcagcaacgaacgGATTATGTTACCACCCAGCTTGTTATGCCATTGGAGGCGgcgagcagcggcagcagcaacgccaCTTCCGCACAGGTGCAGGGGCAGCTGCAGCAGTACAACGTGCAGAGCGTGCCACAAGTACAAAGCCAGCCGGAGTTCGTGCAGACCACGGCCATGCAGAATGCCTGCAGCATCGAGGCCGCCCTGCTGCAGCCCATCATATACACCGGCTCCACCGACAAGCAGGAGATCAACATCAGCGCCATGACCAACGGCGGCAGCGGCGAGGCGGCAGCGGACAGCAATCTGTACTTCGCCAGCAACTGTGGCGCCGCGCTGCAGCAGGCCATCGGCACGCATGCCGCCATTGCGGTGCCTGCTGCCACACCCGCCACGGTCATTTCGACGCTGCAGCCGCTCTCGAACCAAACGAATTCCATTCTGAAGCGTCGCTTGCGTGCGCACGGCTCCAGCGGCGACTGCAGCACGCCGCACACCTACTCCAAGTACCACGCCCTCTCGCCATTCCGCTCCAAGCTGCGCAAGCCCACACGCACGCACTACACGCCCGCTCCCATACTCAATCCGGATCGCAAGGGCGTCGGCCTCTACTGCAGTGTGCGCAAGGAGCTGGGCACCGGCGTAATATCCTTCGACGCGTTCGACGACGACTTTGACGATCCCGTCGGCCTGGTCGACTTCTCCGACGAGTCGAAGGTGAATCTGGGCTCGGCCTATCAGGCGCAAATTCCCGCGTGCAGGGAACGCAACGAGCTGGCCGATGAAATGCCGCACAGCGGCGACGCCGAGCAGATGTGGAACCCGCAAGTGCAGACGGACGAGAAAATCCTGATGCGCTACATAGATCTCAGCAAGTCCTCGGCGGTGCCGCTGGGCAGCCACTCGGAGGAAATGGCATTGCATACGCTGCTCAAGGCTGATGGCCACACTGCGGTGGCTGTGCTGACGCTGCTACAGACGCAGTCAAACGCATTCCAAATGAAGTGGTCCGCCTATGAGCTGGAGATCTTTCTCAGAGGCCTGGAGAAGCATGGCAAGGACTTTGCCACCATTGCGCTGGAGCTGGGCACGAAGGGCACGGGGGAATGCGTGCAGATGTACTACTTCTGGAAGAAGCTCTGCGTGGACTACAAAGTGTCGCACCTCAAGGCTGAGACggtcagcaacaacagccagaTCAGCGAGCTGAAGCCGTATGTCTGCGAGGTGCCCGACTGTTCGGCGAGCTTCACATCCAAAGCAGCGCTGCATGGTCACACCCGCATACACACCTACGGCAGAAATGCCAACAGCCATGCCAACAACCAAACAGCCACCATCAACACATCCACCTCCACCGCATGCGCCCCGTCGCAATCGGGCAATAACACCGCCAGCCAGCAAAAAGATCAGGCCAGCACTAACGCCAATGCCAATGCCAAGGATACCGATTTCCCCTGCAAGGTGTGCGGCAAAGTTTTCAATAAAGTGAAGAGCAGAAGTGCTCACATGAAGACGCATCGCATACAGGAGACCGATACGCCCGTAcaaaatcaacagcagcagccaccgCAGCAGTtgtcacagcagcagcagcagcagcaacagcaacaacagttacaacaacaacagttacaACAAACACAGTAG
Protein Sequence
MCSASVGTEGSVTLQLRDANSSSDSNQSPAPACLDNALTIGYPDPDMLADVLGTLQAASLKNHSTTTTTTTTKLSNSSCSSSSNSSNNNNTNNKITISRRNSSAPSKEPNNKSGVHTVSTSTNTTNKTNSYIKNCLIRSSSCSNTTNVTSLAQIMSNSSTSSSSLLNNTTNSNSNCSSNSNFSSSSSSNDSTNSVNSSSNNSSSNHLKCVGNKIVPGSANPPTVLKKNRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYVCAMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGIITPQNQTLSPTAGTPTGLSLSPATASGDASSPDGATCIRTYISSGGTVVDAATGVALTEEQIRAINLPIKTGVTLLSPTSSSSTSSGGTSMSANSPTIALTDANSVEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKVDTGTVPVQAMSPQSNLQSRPRTWNMQLLNSSQNVSITVDEATTDSAPSTVASPIDTKEDELGQQLIAAINPNLLNIVKIDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPDTKKSEKKEPSGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPGNLASTANSIRRSISDLESFLSPKSHSSASASSSCISSSSNSPHAAAANMLPAATTIKSSSLSIQQMALPQSIEIFSTKQQKMLHNVSVGVGTTSALTTNATTCSATMKSTATTSHTTTTKSTSTDPKDSTLIELLKRGTRIAVTAKKPHLANSTNTNSAAATNTTTTLATSRHIIAGNNRTVIIPSDVQVLPSKLKSSNGSSSRASTPATSISLSEATPLSLTISQSGSSSGDVYTLTYSSDSAGLFEDAEVYNVCDTEMLLQTVDSMQLLNEAADQIKSPHSEQYSTDGGGGNGRGSVEELIKIESDAASLNSTGNAMHALPTSLPTFQHFHSKELLMHSNSQLQASLTLPAELKQQLVSMSSPTHSPLAYPTPPSSHENVTQSSPYVEEAQQQQQFVESANVFFNEKCNADFLAQANEAAFFKSNAAELSENEKILKLKSVLEESAFDSAIKVEDLLAGAQNDTECDLREFAETNLSFLDEDQEFLNDSHNATSPLSESFFTSGIGSAEEVKEVLREVLPEEGVNLNCEHQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPRDFGQQRLQHQQIIQLPQQLQVQQQQQQQQQTTVYAAQQLEQQPHSQQQQLSQGEQQQRTDYVTTQLVMPLEAASSGSSNATSAQVQGQLQQYNVQSVPQVQSQPEFVQTTAMQNACSIEAALLQPIIYTGSTDKQEINISAMTNGGSGEAAADSNLYFASNCGAALQQAIGTHAAIAVPAATPATVISTLQPLSNQTNSILKRRLRAHGSSGDCSTPHTYSKYHALSPFRSKLRKPTRTHYTPAPILNPDRKGVGLYCSVRKELGTGVISFDAFDDDFDDPVGLVDFSDESKVNLGSAYQAQIPACRERNELADEMPHSGDAEQMWNPQVQTDEKILMRYIDLSKSSAVPLGSHSEEMALHTLLKADGHTAVAVLTLLQTQSNAFQMKWSAYELEIFLRGLEKHGKDFATIALELGTKGTGECVQMYYFWKKLCVDYKVSHLKAETVSNNSQISELKPYVCEVPDCSASFTSKAALHGHTRIHTYGRNANSHANNQTATINTSTSTACAPSQSGNNTASQQKDQASTNANANAKDTDFPCKVCGKVFNKVKSRSAHMKTHRIQETDTPVQNQQQQPPQQLSQQQQQQQQQQQLQQQQLQQTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01055488;
90% Identity
iTF_01055488;
80% Identity
iTF_01055488;