Ncom004764.1
Basic Information
- Insect
- Neria commutata
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963457695.1
- Location
- OY735245.1:55384584-55388728[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.86 1.5e+03 -0.2 0.0 34 44 202 212 200 214 0.84 2 2 2.7e-14 4.9e-11 43.0 0.2 3 44 659 700 657 702 0.95
Sequence Information
- Coding Sequence
- ATGAATTTAGATCCGAAAAAGGATGGCAGCCCGAATGTGGAGTTTTTCCAATCGACAGAAACGTTGCAGGGCTTCGATTCGATACGGCAGTGGCTGCAGAAGAATTGTAAAAAGCATTTGGCCAATAGCCCGGATCCCATCACAAAGGAATCCTTGGCCCAGTTGCTGATACAATTTCTACAATATGTGGAGGCGAAATTGGGCAAGAATTCGCCCGAGCCGCCAGCTACGCGAATCCCGATGCGCTGCTTCTTGGACTTCAAATCTGGCGGTGGTCTCTGCATCATTTTCTCCACGATGTTTCGCTTTCGAGCTGAGCAGCGTGGAAAAAAGTTTGACTTTTCCGTGGGCAAGAATCCCACGCGCAAGGATCCCAATATACAACTATTGATTGACATTGAGCAGGCGCTGGTGGAAGCAGATCTGTATCGCATACCCTATATCTATATACGCCCCGAAGTCGAGAAGTCTTTGGCTACACGTTTGCGTGAGATACTAGCTACGCGGCGTGTGGAAATCGTCACCGATGAAGAGGATGCCACACATATCATCTACCCATCGGTAGATCCACACCCTGATGAGTACGCGCGACCGATATTTAAGCGTGGCAATCACGTTATGTTGCACTGGTACTATCTACCAGAATCATATGATTCGTGGGCAATTAACTCGTTTGATTTGCCGGATAATGTTCCCGAGAATCCAGAGTCGCCGGCCGAACGTTGGCGTGTATCGGCATCTTGGATTCTGGATTTGGAGCAGTACAACGAATGGATGGCCGAAGAGGACTACGAGGTAGACGAGGCGGGCAAGAAGAAGGTGCACAAACAGCGTCTTACATTTGAGGACACCATGTCATTTGGCCCGGACGACAAGAAAAAGGCAAGTGGTAGTGCTGCTAAGCATAAGCGACGTCGTTCGCCATCTCCATCTTCATCATCAAAACAAGGCAAACGTAAGCGTTCACCGGCCGTGCTGCATAAAAAATCGCGTAACGATGATGATGAAGATTTGACTCGCGATATGGATGATCCGCCCAATGAACCTAATGTGCAGGAGGTCGTCAAGTCAACGTCTTTACAGTCAACTGCCAGTCCAGCACCAGGCGGTAAATCACGTGCTGACAACGACATGTTGCCTATTAAAGGGGGCACCATGACTGATTTGGACGATGAAATGACTGGCGGTAGCGCCGCTCAAGCGCTATCCACTTGTGACGGCGAGAACTCACAAACGGGTAAAACGAGCGACAATAGTAATACACAGGAGTTTTCATCTTCCGCTAAGGAGGACATGGAGGATAATGTCACCGAGCAGACGCATCACATAATTGTGCCCTCCTACTCGGCCTGGTTTGATTACAATTCCATACATGTCATCGAGAAACGGGCCATGCCGGAATTCTTCAACAGCAAGAATAAATCCAAAACTCCAGAGATTTATATGGCATATAGGAATTTCATGATCGACACCTACAGATTGAATCCTACTGAGTATTTGACGAGCACCGCCTGTCGTCGCAATTTGGCCGGCGATGTGTGCGCCATCATGCGCGTGCACGCTTTTCTCGAACAGTGGGGTCTCATCAACTATCAAATCGACGCTGAGCTACGTCCCACACCGATGGGTCCTCCGCCCACCTCACACTTCCATATACTATCTGACACACCGTCGGGCTTGCAGTCGCTCAACCCACAGAAGACGCCACAACCTTCAGCGGCCAAAACACTGCTCGATTTAGACAAAAAGCCGCCACTGAGTAAAGAGGGCTCTGTAGAGGCAGACAAGCCAGGTGTGTTAGGTGTTGGTGTGGGCATGGGTGGAATAGCTGCCGGTGTTTTGAATATCAAAACGGAAGCATTGGAAAATGGTGCACCTTCCTCAACAACTGCAGGTCAATTCGGTCTGCGTCTCGATCAGTATGCAAAGAAACCGGCCGCCATGAAGAATCGTACGGCAGCCAGCATGTCGCGTGAATGGACCGATCAAGAAACACTGCTGCTACTTGAGGGTTTGGAAATACACAAAGACGATTGGAATAAGGTATGCGAGCATGTGGGCACACGCACCCAGGACGAGTGCATCTTGCATTTTCTACGTTTACCCATTGAGGATCCGTACTTGGAAGATGATGGCGGCTTTCTGGGACCGCTTGGCTGTCAACCCATACCGTTCAGTAAATCCGGCAATCCTATTATGTCGACAGTGGCCTTCTTGGCATCGGTGGTCGATCCACGTGTAGCTTCTGCAGCTGCTAAAGCTGCCATGGAGGAGTTTGCTGCCATTAAGGATGAGGTGCCCGCTACAATCATGGACAATTATATGAAGAACGTGGAGAAGGCATCTGTATCTGGCAAGTTCAATCCTAATTATGGTTTGGCCAATAGCGGTATTGCTGGCACAGGCGCCGACAAGGAGGAGGAGGATGCCAACGCGGCGTCAACGTCTGGAAGTTCAGTCACTACCGCCGCGACTACTGGAGCCGTCGATGAGGAATTGAAGGACATTACCAAGAAAGAAGATGAGTACATATCGAAATCCAAAATTGGCGCTGACAAAAATGAGAAAACTGATTCTCACAGTGAAAAGAATGAAgatgaaaataacaaaaATGCTAATAAGGACATCGACGGTGGCGCCGATGCTGATGTGAAGGATGGTGATGCCTCAAAGCAAGTGTTCAACGAGGCTAATGTGCAGAAAGCCGCCGCAGCTGCGCTCGCCTCAGCGGCCGTGAAGGCCAAAAATTTGGCTGCACTGGAGGAACGCAAAATCAAATCCCTCGTCGCTTTACTTGTCGAAACGCAAATGAAGAAGTTGGAAATAAAATTGCGGCACTTTGAGGAGTTGGAAACCACAATGGAACGCGAGCGGGAGGGTTTGGAATACCAACGCCAGCAGCTCATAACAGAGCGACAGCAATTCCACCTGGAGCAGCTGAAGGCTGCTGAATTCCGTGCGCGCCAACAGGCGCATCATCGCTTGCAGCAGGAGCAACAGTGGCAAGGAGTAGCTTCTGCCGGTGCCGTGAGTAGTGGCGGTCCTCCCGGACAACCCATGGCCGCTGGTGCTGCGCCGGCTGCTACAGGCGCACCCACTGCTGGTGCACCAGCAGCCGCTGGTACTACCCAACAGCCCGGTGCTGCTACAGTACAACCTCCACATGGAGGCACTGCGTCATTACAACAACCGGGACCCACTCCCATGGATACTACGCCTCCGTCTGGCCCCACTGCTGCACTCTCGAcggctgatgctgctgctacgAGTATTTCTGCACCGGGACAACCAATTCCAGCAGCTCcgcctgttgttgctgccgccgctccGTTACCACCTACAGGAACTGCTCCGCCGCCAAACGCTCCGCCAGGCATTCCAATTGTCGGTGCGCCATCTACAGCTCCTCCACCATCTTAA
- Protein Sequence
- MNLDPKKDGSPNVEFFQSTETLQGFDSIRQWLQKNCKKHLANSPDPITKESLAQLLIQFLQYVEAKLGKNSPEPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSVGKNPTRKDPNIQLLIDIEQALVEADLYRIPYIYIRPEVEKSLATRLREILATRRVEIVTDEEDATHIIYPSVDPHPDEYARPIFKRGNHVMLHWYYLPESYDSWAINSFDLPDNVPENPESPAERWRVSASWILDLEQYNEWMAEEDYEVDEAGKKKVHKQRLTFEDTMSFGPDDKKKASGSAAKHKRRRSPSPSSSSKQGKRKRSPAVLHKKSRNDDDEDLTRDMDDPPNEPNVQEVVKSTSLQSTASPAPGGKSRADNDMLPIKGGTMTDLDDEMTGGSAAQALSTCDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTPQPSAAKTLLDLDKKPPLSKEGSVEADKPGVLGVGVGMGGIAAGVLNIKTEALENGAPSSTTAGQFGLRLDQYAKKPAAMKNRTAASMSREWTDQETLLLLEGLEIHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVASAAAKAAMEEFAAIKDEVPATIMDNYMKNVEKASVSGKFNPNYGLANSGIAGTGADKEEEDANAASTSGSSVTTAATTGAVDEELKDITKKEDEYISKSKIGADKNEKTDSHSEKNEDENNKNANKDIDGGADADVKDGDASKQVFNEANVQKAAAAALASAAVKAKNLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGVASAGAVSSGGPPGQPMAAGAAPAATGAPTAGAPAAAGTTQQPGAATVQPPHGGTASLQQPGPTPMDTTPPSGPTAALSTADAAATSISAPGQPIPAAPPVVAAAAPLPPTGTAPPPNAPPGIPIVGAPSTAPPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -