Ncom021123.1
Basic Information
- Insect
- Neria commutata
- Gene Symbol
- F54F2.9
- Assembly
- GCA_963457695.1
- Location
- OY735249.1:33393750-33395658[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9 5.2e+03 -1.9 0.1 4 18 19 32 18 54 0.67 2 3 5.7e-08 0.0001 22.8 0.0 4 38 301 338 298 339 0.89 3 3 1.7e-08 2.9e-05 24.5 0.2 3 43 390 435 388 437 0.89
Sequence Information
- Coding Sequence
- atGAGATCGGTGTATTTTCTGGTTTTATGCGGACTTTTTGTTGGTACTCATGCCTGGGATTCGGAAGAATtggaaatatttgatttggtggAGGAAATAAAtcgtaatttttatgaatttatggaaattaCTCAGGATGCCACGAATAATGAAATCAAACGTGCCTGCCGCAATCTTTCAATCGTGCTACATCCGGATAAAAATTCCGCTGAAGATGCCAATATACAGTTCCGTAACTTGGTGTCTATCTACGAGGTATTGAAAGATTCCTCTAAGCGCGAAAAGTATAACAAGGTGCTGAAGGAGGGCTTGCCCAACTGGAAGTCCGCGTTGTACTATTATCGTCGCATGCGGAAGATCGGTCTGTATGAGGGCTCGCTAATAATATTCATCATCATCACAATTGGGCAGTATATGTTTGCTTGGGCAGCGTACGTAGAAAAGAAATACACTGCGGAACAAGTCATTGGTtcaaaactaaagaaattaCAGAAACGGAATAAAAACCTCGACATGGACACCATACTAAATGAGATTCCCGCGCCTTCTATATTGAATACGTTGCCCTTTCAAATTCCTCTTGCCATTTGGAACTTGCCCAGGACAATAAAGGACGGTTTCACCAAAGCAAACGAATTGAAAGAACTCGCATTAGAAAAACGGAGACAggAGAATGAAGCTGCCAAACGACAAGAGGAACtggaaaaagaaattgaagaaCAAGCTCGTTTGCGCAAGGAGAATAAGGAAAATGTGCGCAAACGCAGGCAAAATACAAAAGCTCCTGAGAAAACGGACGATGATTTAAGAGGCTACGCACAAATAAAGGCGCGTGAATCCACCGAGAACGATGCTGTTCGACCGGCTGTGCAAAAGAGTACAAATCTTAGTGGCGGCTTTTGGACCGACGAAGATCTAACCGAGCTAATACGTTTGGTTAAGAAGTATCCCAGCGGTTCTGGTAATCGCTGGAATACTATTGCCGAAACTATGAATCGTACAGTTCAGGAGGTCACATTTATGGCTGCGAAAATGAAAGAGAGTGGATACCGCGTGCCTGGACAGAGCGACAGCGTTGCGGAGAATCTGGTACAAGAAACGCAGGCTGTGAAGAAGGAAAAAGTGAAGACGACCGGTAGCGAGAAAAGCATAATGATACCGGAGACAAACTGGTCACAGGAGCAACAAGTTGCACTGGAGGCGGCCATCATAAAGTATCGAAGCAATACTACCGGAGATCGCTGGCAGAAAATATCCAACTGCGTGCCGGACAAGACAAAGGAAGAGTGTTTGGTGCGTTTTAAGTATCTTTGTGAGTTAGTCAAGTCGCAAAAACAACCGAAGAGTGATAGTGAGACAATACATAATGCAGAGGAGCAAGGAGAGGAAGGAAAAAAAGAGCAGGAGGAGAAAGAGGAAGATGTGATAGCGCATGATAAGGTGACAGAGCAAGAGATGGAAGTAGCAGCGACAAACGAAGTGCAAGAAACAGGTGGCAAAAAACGCAGCAAACGAAAGGAACGTCGGCGACGCCGGGACCTTTCGAGTGACGAAGATTCCGACGATGTCTATAATTACGAGAGGAGTTGA
- Protein Sequence
- MRSVYFLVLCGLFVGTHAWDSEELEIFDLVEEINRNFYEFMEITQDATNNEIKRACRNLSIVLHPDKNSAEDANIQFRNLVSIYEVLKDSSKREKYNKVLKEGLPNWKSALYYYRRMRKIGLYEGSLIIFIIITIGQYMFAWAAYVEKKYTAEQVIGSKLKKLQKRNKNLDMDTILNEIPAPSILNTLPFQIPLAIWNLPRTIKDGFTKANELKELALEKRRQENEAAKRQEELEKEIEEQARLRKENKENVRKRRQNTKAPEKTDDDLRGYAQIKARESTENDAVRPAVQKSTNLSGGFWTDEDLTELIRLVKKYPSGSGNRWNTIAETMNRTVQEVTFMAAKMKESGYRVPGQSDSVAENLVQETQAVKKEKVKTTGSEKSIMIPETNWSQEQQVALEAAIIKYRSNTTGDRWQKISNCVPDKTKEECLVRFKYLCELVKSQKQPKSDSETIHNAEEQGEEGKKEQEEKEEDVIAHDKVTEQEMEVAATNEVQETGGKKRSKRKERRRRRDLSSDEDSDDVYNYERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -