Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963457695.1
Location
OY735247.1:43855751-43856698[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-12 2.1e-09 37.7 10.2 2 52 62 112 62 113 0.96
2 2 9.2e-06 0.013 15.9 5.9 25 65 99 139 98 145 0.95

Sequence Information

Coding Sequence
ATGTCAGCAACACCTGCTGTTTTTATAACCGTACCCAAGTATGTGGCGATCTCGCCCAACACTAACATCTTGTCCAAGATAAGGCCCGCACCAATGGCGGTGGTGGCGGAGCCACCAGTGGCAGCAACGACGGAAGACGGGGCACCCAAAAGCAAGAAGCGCCGTCTAGATCACCTGACCTGGGAGGAAAAGATACAGAGAAAGAAATTGAAGAATCGCGTAGCAGCACAAACTTCGCGCGACCGCAAGAAGGCGCGCATGGAGGATATGGAATATGAGTTAAGGGATATTAGCCAGAAGACGGAGATACTACAAAACAAATGTGAAAGTTTGCAAGCGATTAATGATTCGCTCTTGGAGAAGAACCGCAGACTGGACATGGAAGTCGAAATGCTTCGCCAACAACTCACGgaactacaacagcaacaacaacagcagcaatctACAAAGAGCGTCGCCACCAACACAGTTGGCACTTGTGCCGGCTGTGAGTCCATCCTAAATGGATCAGCAGTATCCAATTATACTGACCCTCTGCAGCAGGGATCACCTCTAACGGACTCACAGTCGACACAAGAACAACTGAAACGGAGCAACAGCTTGGCGGCGCTCTGGAGGATTGTTGCCCTCTGCCTACTCTACAAGACATGCTCCTCCTCGATGAAGAATTTGATGCCGGAAAGCTGGAGGAGCTTGCCGAAAGTCTGCTCGCAGATATCACAGCAGACATGGAAGCAGGCGATAGAGAGAGCAATGAAGCTGTTGCCAAAGTTGCAGGCCGAGCAGAGCGACTGCCTGGACCAGTGGTGGGGACCACAGCAGAGCGCCTGGAATCCAGCGAACATagcacagcacacacacaaagtagCTGCTTAA
Protein Sequence
MSATPAVFITVPKYVAISPNTNILSKIRPAPMAVVAEPPVAATTEDGAPKSKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKARMEDMEYELRDISQKTEILQNKCESLQAINDSLLEKNRRLDMEVEMLRQQLTELQQQQQQQQSTKSVATNTVGTCAGCESILNGSAVSNYTDPLQQGSPLTDSQSTQEQLKRSNSLAALWRIVALCLLYKTCSSSMKNLMPESWRSLPKVCSQISQQTWKQAIERAMKLLPKLQAEQSDCLDQWWGPQQSAWNPANIAQHTHKVAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-