Basic Information

Gene Symbol
zfh2
Assembly
GCA_963691935.1
Location
OY829916.1:13384497-13427037[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.4 2.7e+02 4.2 0.8 3 23 2 23 1 23 0.93
2 15 0.00021 0.04 16.2 1.4 2 23 318 340 317 340 0.96
3 15 5.1e-05 0.01 18.1 0.7 1 23 372 396 372 396 0.92
4 15 0.016 3.2 10.2 0.4 1 22 471 492 471 495 0.91
5 15 2 3.9e+02 3.6 1.9 1 23 706 730 706 730 0.91
6 15 4.3 8.4e+02 2.6 0.8 1 19 1047 1065 1047 1070 0.77
7 15 0.0029 0.56 12.6 0.2 2 23 1149 1171 1148 1171 0.95
8 15 0.087 17 7.9 0.1 2 20 1218 1236 1217 1241 0.91
9 15 0.0015 0.29 13.5 2.0 1 23 1290 1312 1290 1312 0.96
10 15 8.6e-05 0.017 17.4 1.3 2 23 1319 1341 1318 1341 0.94
11 15 0.018 3.6 10.0 2.7 1 23 1406 1430 1406 1430 0.94
12 15 0.018 3.4 10.1 0.6 1 22 1462 1483 1462 1486 0.89
13 15 0.0079 1.5 11.2 0.1 1 23 1547 1571 1547 1571 0.93
14 15 0.85 1.7e+02 4.8 4.8 1 19 1721 1739 1721 1744 0.91
15 15 0.00012 0.024 16.9 2.8 1 23 2414 2436 2414 2436 0.98

Sequence Information

Coding Sequence
ATGTGTTTCATATGTAAGCTCAGCTTTGGCAATACGAAGTCATTTAGTTTACATGCAAATAACGAACACACATTAAATTTACAAGAAtccgaaaaattattattaaatcgaGAATATTCCAGTGCCattatacaaagaaatattgacgAGAAACCACAAATATCATTTTTAGAACCTCTTGATATTCATAAAACAATTAAtgataatattaaaagtgaatacATGCCACAACATTCTAATACAATGCAATCAAATGATTCAAATCATCATAATATGGTTATAGCAACATCTGCAATGTCAGCGAGTGCAACACCGTCTTCATGTGGAACAACAACGATAACAACGTTTCCAACAACGGGAGGTATTGTGTCACAAGCAAACATCGCAATGTTATCgagtttaaatgaattaaatttaagtggTACTGAAAATAATATGCAAAATAGTAAATTTCTTTCGGAATTTTTACAACATCAACGTGATAACCAACTACATTTGCAATGTCCTGAACATGCCGGTATCGTAAAACCGAGCCAAATCGATTGTAAAAATTGTGAACTAAtgaatgttaatttaaatttgaaatcaccAGTAACACCAACCCGATCACCAAATAATAGTCTAAATCATATAACAAATCTTCAATCgccaacaaataataataatttaacaatgtCGCCAAATCAATCATCTGCCACACCATCGTCAACAATTTCAAATACATCGGTAACATTAGTATCCAGTTTGCAATCGAGTTTGCAAAATCAATCAACACCAGTTAATTCTACATCCGCTTCCGTAATCGCACCAAGCTTTACAATTGGTGCATGTCCTGAACATATCAATGGCCGGCCGATTGGTGTCGATTGTGCGCGATGCGAAATGATACTCAATTCGGTGCGACTAAATAGTGGTGTGCAAATATCGACGCGAAATTCATGTAAAACACTTAAATGTCCTCAATGCAATTGGCATTACAAATATCAAGAGACGCTCGAAATCCATATGCGAGAAAAACATCCGGATGGAGAAAGTGCGTGCGGTTATTGTTTAGCAGGACAACAACATCCACGGTTAGCACGGGGTGAATCGTATACCTGCGGCTACAAACCGTATCGTTGTGAAATTTGTAATTACTCAACAACGACAAAGGGTAATTTATCAATTCATATGCAAAGTGATAAGCATTTGAATAACATGCAAGAACTAAATAATACccaacaaaatttaacaacCCAAGCACAACCGGTCGATCAAATTCGAGAAAGTCCTAAAATTGTATTAGCAAATTTACAAAACCAACCATCAACCACGCCATCCCAACAACAGCAACAGAGTCAACAAAATATGCAATCACAGCAATCTCAGCAACAGTCaatacaacagcaacaacaaaaaccaaaaccaaGTTTTCGTTGTGATGTTTGCTCATATGAGACGAGTGTGGCCCGAAATTTGCGTATCCATATGACAAGCGAAAAACATACGCATAATATGGTGGTcctacaaaataatataaaacatctACAGGCCCTAAGCTTTCTACAGCAATCGCAAAATTTAGGACAGTTAAGTGGGCCGCCAAATTTAACGAGTACAACGAGTGGTGTTGGTGGGGTATCCGCAggacaaaatttatcaaatttacaaaattttctacCTGAAGCCGCAATTGCCGATTTAGCTTATAGTCAAGCGTTACTAATCCAAATGATTCAACATCAAAATCAAGCGGTTAACGCAAGTACAATAAATGAGCCGCCGCCAAATGGTAATAATAGTCAAAATATGCAATCAACATCCCCCACACCAATCAGCACATTGATAAATCAACCAAACCCATTACGACAAATTCCTAACAATAGCACTGTAAATCAAACGACAGCTCAAAATTGTGGCATAATACCATCAGCGATCAGTAATGAATCGGACCACGGATTAAATCCAGAAACATTTGAACCACCTATTGAAACTGATTTGACACCAAAAACACTTTTCACATGTTTAGTGTGctcaaattttaatacaaattcaatTGAAGAACTAAACAATCATATAATGACTGATCGATCACGATGCAATAATAATGACATAATGATTATAATAAACAGTAATTATATATGTCGTTTATGTAATTACAAGACAAATTTAAAAGCCAACTTCCAGCTGCACAGTAAAACCGATAAGCATATACAAAAACTGAACTacataaatcatatcaaagAGGGTGGAATTAAGAAtgagtacaaattaaaatataacaacaataatactatacaattaaaatgtaattgttgCGATTACTACACAAATTCGATACAGAAACTAAGCATCCATATACAAAATATTCGGcacgaaaatatgaaaataattttcaatcatcTGCTAATCATATCGAATTATTGTacaaatagtaatagtaataacaataataataattcgattGGTGCGTCATCTATAAATCAAATGTTATCATCACCGAGGCCCGTAAGTCATAGTACGGATAGTATACACCAATCACCAAAAAGTTCAAATTCCTCATCACCACTTCCCCCAGCTAGCGGTGTTGAACACCAAACGCCAGTGCTAACCAATATAAAAACGGAACAGCCGGAACATGATCAACTACCATCAGCAACAATTGGTATTGGTAGTTCATCATCGCACCATCCGAATGATACGACGTTAAATAGTGAATCCACACCGTTGTACATAAGTACGGCCGCGATAAATAAAATGCTCGGCTGCCAGTTATGCAATTATAGAACGACAAATATACTTGGTATGGTGCAACATGTTAAATCGTTGCGTCATATTCAAATTGAACAACTGTTTTGCTTACAACGAAGATCGGAAAATTTGGATACGCTTGAATTGTCCGATGTATTCAAAGTGGTTGAATGTGatATTAAAAGCGAAAAATGTAGCCCTATTCAATCGCCTGTAAGCAGTAGCAGTAAACTAAACGATAATCAAATATTAGAACGACCTAATCTCACAGTAACgccaaatcaaaatcaaataatgaaTTTATCAACAAGTCAAGCAAATTTAGAAACGttgcaacaacaacagcaacagtCACAAACACCTGGACCACCACCGCCAACATCAAGCTCACCACAACAGACAACACTGTTTAAATGCAATCATTGTGATTTTATAACCGAAAATCGTATTGATATTGATCAACATTTTGCCAATTTACATCCAAATTCGACTGATAACGAAATAATCTTTCTACCATCGCATTCGACGGTGATAGCAGCCGCTGCAGCAGCACACGCCGCCGCTCAAATTGCCGCTGCGGTTGCATATTCTACTTCATCGAATACATCGTCGATCAATGAAGATTGCAAATCAGTTAATAATGATGATATCACCGATGATATTATGGACGATGACGTACTCGACGATGACATGGACACGGAAAGTGTGATGATCATGTGCCCTCTATGTCAAGATAGTTTtagtgataaaaaattattagagaaGCATGTGATGAGTATACACAGTGTAAATAGTGACGGATTATCACGATTATTACAACTGGTAGATACGAGCCATTGGCTCAATAACAAAAAGCAGGATAATCTaaatttatcatcatcatcgtcgtcgACCGTATCTGGTTCGAGTGGCCAACAAATAGAATGTACCTACTGCGGAACAGCCTACAAAACAATGAACGATTTATATTTGCATGCGATCGATAATGAACATTACCTGGTGAAAAATGATTTGTATTACTGTTtgcttaaaaattgtaatttactaaataatcaaTTCATCAATATAAATTCACTTAAGCAGCACTTTAAAGATAACCACATGAACGCAATCATATCTGAGAAGCATGTTTATAAGTATCGTTGTAAGTTATGTTCCCTGGCATTTAAAACACAGGATAAATTAAACCAACATTCGTTATACCATACGATGCGGGACGCAACCAAATGTAATATCTGCAATCGTAATTTTCGCAGCCAAATTTCGTTACAGAAGCACATTGAACAATCGCATACTCAAAATACCCAGAATAGCGACATAATCGACGACTATGTGATAAATAATCAAACTTCATCACCGTCACCATCAACGTCATCGAGTATAAAAAACATGGACGAAGATATAGACcaggcaatggaaaaccctgaAAGTCTGGAAACGATCGATTTAGATCAAATCACGAATTACaatgatttaaatgtaaaatataaatgtcatAAATGTCGTGTGGGATTTCAACAGCAGCTAAACCTATTACAACATTATAAGACGGCTCTACATCGCCGAAATAGTAATACGAGTAGTGCAGGAATTAGTGTTGTAAATAATTTGCAACAGTAcccaatagaaaaatatttggatCCGAATCGCCCATTTAAGTGTGAAATATGTCGAGAaagttttacacaaaaaaatattctactcGTGCACTACAATTCTGTGTCACATTTGcataaattgaagaaaatcaaTAGTAAATCGCCGTTGGCCGATTATCTACAAATGAATGATCcgaacgaaataaataatagtttgaTTGGGAACTCAGACAGTGATGGGAGTTCAACGAATAAACGGAAACTAAGTTATGACCTGTGTAACAGTGATTACGATAGCCCGAAGAAGCGGTTTAAATGTGATATCTGTAAAGTGGCGTATGCGCAAGGATCAACATTGGATATTCATATGCGTTCGGTGCTGCATCAAACGCGAGCGTGTCGTTTACAGGAATTACAATCAACTAGTAGTGGTGCCTCGCCGCTGACAACAACATCACCATCCTCgtcgaatattttaaatgcaGTCGCAGCCGCTGCCGCTGCTTCATCATCTCTTATCAATCCAGTGGTATCTCGcccgaataaattaaataatgacaGTAATAACAACAGTAAAAATGACGCGGGATCGCCCGCCCTACCAAACGAGGATTTAATGAATTCCCCTAAACTAAATAacaatcaaatttacaaaacacttCTCGAAAATTTCGGATTCGATTTGGTAAAACAATTCAACGAgataaattcgaataaaaactcaaatttaaataatttaattgagacaacaacaaataataatctaaataatataattaacaatataaataataacattatcAACAGCAGTGGAGATGATAACAACTATTTGTACTATTGCCGGcactgcaataaaaaattctcGAGTATTTTTGTACTCAAATCGCATTGCGAAGAAATTCATAATGAAAAGATTCCGCTCGAGATACTGGATAAAATAGCagataagtttaaaaattatttaaacgagGTGTCATCTGAGCAGCAGCAGGTTCCGACTGTAACACCAGCAGTCAGTATACAGCCAACGCCAGCGCCATCGGTGGTAGAAGTGCCCAATTCCGAAATActtgatttttcaaataaaacaggCACAACAATTAAAAACGAAACCGATACAGCTAACGATTTGTTTACGCAAAAGTTAATCGAACAgcaaaatatgttaattaatCAGAGCAGTGGTGGTGGTTGCGCCCCTGGATCTAATTTGCCCTTAAATACCATcgatatgttaaatttaatgcaATTCCACCACTTAATGTcgttgaattttatgaatttagcaCCACCATTAATTTTTGGTGCGGCCAGCGGTACAAATGGAGCAAACAGTATACCCGGTGGTTTACTACCTACCTCATCCACATCCTCCTCAAATAACACTAATTCGCAAAACAATATTAGTTCGACATCGACATCGAATACACCAATACTGTCAATGCCACCAAGTTCCGTTACACCTGAACTTCAATTACAAACCGGGGTACCCGCTCAACAAGTTCAATTATTACAGCAACAGGCAGCCGCACAGGCAGCTGCAGCGCAAgTTTCAAATAATCAAAAGAGGGCCCGAACCCGGATCACAGAtgaacaattgaaaattttacgaGCCCATTTTGATATAAACAATTCACCAAGTGAAGAAAGTATTATGGAAATGTCTAAGAAGGCTAATTTACCGATGAaggTGGTAAAACATTGGTTTCGAAACACGCTGTTTAAAGAGCGACAACGAAATAAGGATTCACCctataattttaacaaccccCCATCAACCACTTTAAACTTAGAAGAGTATGAACGTACGGGACAAGCGAAAGTGACAAATTTATTAGGTAGTGGAAATTGTGCGACAACTAGCGGTGTCGTTGCCCCACCAATTATCGCAGTAagtgaaaatttggaaaaaggCAATCAACAATCTTCATCTTCATCGTCGTCATCATCGTCTTCGTCTTCATCGATTATAACAACTTTTCAACAACAGCAAACTTTAGCCAcgcaacagcagcagcaacaaaatGAACTACGAGAACACGAACTGCACCAATTACAGTTATTACAAAATCAACATCAGCTACACTTAGTGCAGCAGCAATtacaatttcaacaaaaacaattacaatCAAATTTAGATCATATGAATCGGCCGATATCACAACCATCGAGCGTATCCAGCGATCGACAAGACTATCAAACTAGTATGATAAAACAAGAACCAAACGATGCTGACCAATCGGACACCGACAATCAATCAATTGTGAATCAACGTGCCGGTTCGAGTATTCGTGAAGGAAGCACAATAAGTGATCGAGATCATCGTGATTTAGCCGATCATGAAATGAGCCTCCACCAATCCAGTATGtactataataattttgaaacaaaatcggAAAGTGGTTCAAGCGAAATATTATCACGACCCCAATCACCAAATTGTTCGTTTAGTAATATAAACGATATTATAAATCAGCAAATTGAATCGATCCCGattaataatataacaaatatCGGAAATATGGGGAGCAGTATGGGGccaccaaaaaaatttcaaattaacaaaatgtttgatAAAAGCTTCGAATCGAGCTCAAACTCATCGTCATCATCAACGTCGAGCGGCAAAAGGGCGAATCGTACGCGTTTCACGGATTATCAAATAAAAGTGCTACAGGaattttttgagaataattCATATCCGAAGGACAGTGATTTAGAATACTTGAGCAAACTACTGTTACTGTCACCACGGGTTATCGTTGTTTGGTTTCAGaatGCGCGCCAAAAACAgcgaaaaatttatgaaaaccaaCCGAATAATACATATTATGAAACGGAAACTGCTACAACGACACCAATCAATACGAACCAATCGACTAATCCAGATAAAACCAAATCAAACATAAATTACACatgtaaaaagtgtaatttAGTATTTCAACGGTATTATGAATTAATCAGGCATCAAAAGAATCATTGCTTTAAAGaagagaataataaaaaatcggcCAAGGCACAAATTGCAGCTGCACAAGTCGCACAAAGTTTGAGTAGCGAAGATTCAAATTCAAGCATTGACAtaaCGCAGCAGCAATTGTTACAAGTTCAGCAACAGAAACAATTACAGGTAACACCTCAACAGTATAGTCAATTATTGCAACAACAATACGGTGATAACATACCATTTAGcttaatacaaaatttgcaaaataattttttacaacatcaacaacaattattGCAACAAACAAATCAAACTACGTCGTCACAACGGACTAGTGATTGTAGTAACAACGATAAACTAAATCCAAATagtaatgatgatgataatagTACAATTGATTTGACaataccatcatcatcatcatcatctttgaCTGGtggtaataattgtaataataataatacaaataataataataataatattaaaactggTGGTAAATCACAAAACAGTGACGATAATCATGACTGTAGTAATAatgatagtaataataatagtagtagCAATCACGTTAATACGACAAAGACGGAgcaatatgattttttatataaatattttttaaaaaacggtGACGAACCAATGAATAACGAGgaattttatgttgatgatctgaatgaagatgatgatgatgatggtgatagTGGTGATGGTCGTAATAATGGAgctggtgatgatgatgatgacacaAATAATAACAGTCATGGTGAAgTAACAATGATGATGATATCctaa
Protein Sequence
MCFICKLSFGNTKSFSLHANNEHTLNLQESEKLLLNREYSSAIIQRNIDEKPQISFLEPLDIHKTINDNIKSEYMPQHSNTMQSNDSNHHNMVIATSAMSASATPSSCGTTTITTFPTTGGIVSQANIAMLSSLNELNLSGTENNMQNSKFLSEFLQHQRDNQLHLQCPEHAGIVKPSQIDCKNCELMNVNLNLKSPVTPTRSPNNSLNHITNLQSPTNNNNLTMSPNQSSATPSSTISNTSVTLVSSLQSSLQNQSTPVNSTSASVIAPSFTIGACPEHINGRPIGVDCARCEMILNSVRLNSGVQISTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYTCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNNTQQNLTTQAQPVDQIRESPKIVLANLQNQPSTTPSQQQQQSQQNMQSQQSQQQSIQQQQQKPKPSFRCDVCSYETSVARNLRIHMTSEKHTHNMVVLQNNIKHLQALSFLQQSQNLGQLSGPPNLTSTTSGVGGVSAGQNLSNLQNFLPEAAIADLAYSQALLIQMIQHQNQAVNASTINEPPPNGNNSQNMQSTSPTPISTLINQPNPLRQIPNNSTVNQTTAQNCGIIPSAISNESDHGLNPETFEPPIETDLTPKTLFTCLVCSNFNTNSIEELNNHIMTDRSRCNNNDIMIIINSNYICRLCNYKTNLKANFQLHSKTDKHIQKLNYINHIKEGGIKNEYKLKYNNNNTIQLKCNCCDYYTNSIQKLSIHIQNIRHENMKIIFNHLLIISNYCTNSNSNNNNNNSIGASSINQMLSSPRPVSHSTDSIHQSPKSSNSSSPLPPASGVEHQTPVLTNIKTEQPEHDQLPSATIGIGSSSSHHPNDTTLNSESTPLYISTAAINKMLGCQLCNYRTTNILGMVQHVKSLRHIQIEQLFCLQRRSENLDTLELSDVFKVVECDIKSEKCSPIQSPVSSSSKLNDNQILERPNLTVTPNQNQIMNLSTSQANLETLQQQQQQSQTPGPPPPTSSSPQQTTLFKCNHCDFITENRIDIDQHFANLHPNSTDNEIIFLPSHSTVIAAAAAAHAAAQIAAAVAYSTSSNTSSINEDCKSVNNDDITDDIMDDDVLDDDMDTESVMIMCPLCQDSFSDKKLLEKHVMSIHSVNSDGLSRLLQLVDTSHWLNNKKQDNLNLSSSSSSTVSGSSGQQIECTYCGTAYKTMNDLYLHAIDNEHYLVKNDLYYCLLKNCNLLNNQFININSLKQHFKDNHMNAIISEKHVYKYRCKLCSLAFKTQDKLNQHSLYHTMRDATKCNICNRNFRSQISLQKHIEQSHTQNTQNSDIIDDYVINNQTSSPSPSTSSSIKNMDEDIDQAMENPESLETIDLDQITNYNDLNVKYKCHKCRVGFQQQLNLLQHYKTALHRRNSNTSSAGISVVNNLQQYPIEKYLDPNRPFKCEICRESFTQKNILLVHYNSVSHLHKLKKINSKSPLADYLQMNDPNEINNSLIGNSDSDGSSTNKRKLSYDLCNSDYDSPKKRFKCDICKVAYAQGSTLDIHMRSVLHQTRACRLQELQSTSSGASPLTTTSPSSSNILNAVAAAAAASSSLINPVVSRPNKLNNDSNNNSKNDAGSPALPNEDLMNSPKLNNNQIYKTLLENFGFDLVKQFNEINSNKNSNLNNLIETTTNNNLNNIINNINNNIINSSGDDNNYLYYCRHCNKKFSSIFVLKSHCEEIHNEKIPLEILDKIADKFKNYLNEVSSEQQQVPTVTPAVSIQPTPAPSVVEVPNSEILDFSNKTGTTIKNETDTANDLFTQKLIEQQNMLINQSSGGGCAPGSNLPLNTIDMLNLMQFHHLMSLNFMNLAPPLIFGAASGTNGANSIPGGLLPTSSTSSSNNTNSQNNISSTSTSNTPILSMPPSSVTPELQLQTGVPAQQVQLLQQQAAAQAAAAQVSNNQKRARTRITDEQLKILRAHFDINNSPSEESIMEMSKKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTNLLGSGNCATTSGVVAPPIIAVSENLEKGNQQSSSSSSSSSSSSSSIITTFQQQQTLATQQQQQQNELREHELHQLQLLQNQHQLHLVQQQLQFQQKQLQSNLDHMNRPISQPSSVSSDRQDYQTSMIKQEPNDADQSDTDNQSIVNQRAGSSIREGSTISDRDHRDLADHEMSLHQSSMYYNNFETKSESGSSEILSRPQSPNCSFSNINDIINQQIESIPINNITNIGNMGSSMGPPKKFQINKMFDKSFESSSNSSSSSTSSGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYENQPNNTYYETETATTTPINTNQSTNPDKTKSNINYTCKKCNLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQVAQSLSSEDSNSSIDITQQQLLQVQQQKQLQVTPQQYSQLLQQQYGDNIPFSLIQNLQNNFLQHQQQLLQQTNQTTSSQRTSDCSNNDKLNPNSNDDDNSTIDLTIPSSSSSSLTGGNNCNNNNTNNNNNNIKTGGKSQNSDDNHDCSNNDSNNNSSSNHVNTTKTEQYDFLYKYFLKNGDEPMNNEEFYVDDLNEDDDDDGDSGDGRNNGAGDDDDDTNNNSHGEVTMMMIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01054136;
90% Identity
iTF_01054136;
80% Identity
iTF_01054136;