Basic Information

Insect: Nephrotoma guestfalica
Gene Symbol: -
Assembly: GCA_963691935.1
Location: OY829913.1:145038314-145040628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.0005 0.097 15.0 2.1 2 23 494 515 494 515 0.97

2 6 9.5e-06 0.0019 20.4 2.0 1 23 521 543 521 543 0.97

3 6 7.5e-05 0.015 17.6 0.8 1 23 549 572 549 572 0.97

4 6 7.4e-07 0.00015 23.9 0.5 1 23 578 600 578 600 0.99

5 6 3.2e-05 0.0063 18.7 3.1 1 23 606 628 606 628 0.98

6 6 5.7e-07 0.00011 24.2 2.2 1 23 634 656 634 656 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.0005	0.097	15.0	2.1	2	23	494	515	494	515	0.97
2	6	9.5e-06	0.0019	20.4	2.0	1	23	521	543	521	543	0.97
3	6	7.5e-05	0.015	17.6	0.8	1	23	549	572	549	572	0.97
4	6	7.4e-07	0.00015	23.9	0.5	1	23	578	600	578	600	0.99
5	6	3.2e-05	0.0063	18.7	3.1	1	23	606	628	606	628	0.98
6	6	5.7e-07	0.00011	24.2	2.2	1	23	634	656	634	656	0.97

Sequence Information

Coding Sequence: ATGCCAAATCTATCCAATGGTGTTGATAATATTGCCATGAATCAAAACTATCAAGACgaattatcgaaatttaataATGCAAAAGGCTTTCGAAATCTGGAAAATGGTGCTTTGCATTTGGTTGCTGTACAGCGTGAGGATGATAACTTGATCGATGtgGCTTTCCTAAACTCACAAAATTTACTAGCAAACAGTATTATTGTTGGTCCCAACGGGATAGGTAATACGCAAACTTTGATCGATGGCCAATATACAGtcaattttattgatgaaaattaccAATTGAACGAGCAACAGGTTAATCAGCATAGCAATGATATTCAATTACAACCCGCTATTTTTCAAATGGTAAACACGAAATTGGTAAATCCAGGCGGGCAGTCGGTCATGTTTCCCGTTCATAATGATCCCGATTTAACGGCGATAAATAGGCGAGGAAGTACTACTAGTTTAAAAGATATGGCTACATTAACTCCAATTTCACAAGAGTTGCAGACGGATCTATTAaaacaatcatatcaaaacgtGCCCTTACCGCCTCTTACGCCAATAAGAAAGCTAAAAACTCCTAACAACACAAGAAGAAACGCAAAATTACAGAACGATAATAAAATCAAGGTTGAATCATCGGATAGTGACTATGTAGCGCACGAACAAATGGATTGCCATTTACAATGTGTATCGCTTCAAGAGTCCAATAATTTACAATTGAGCGAACAATtaccaattaatattaaaggtGACTTGCCTCACAAGAaacgaattacaaaaaaaattaaaaagcaaccAATTAAAAAAGCTACCGAGACCAGACCAAACATGAACcaacatcaaaatgaaaataatcaaattgaaaatagtGGGACAAAATTTGGCTGTCAGTTATGTAATGCCACAATTTTTGGTCAGCTTGATTTTTTCGCACATTTAAAGGGGCACTATGAACCCAATAGCATTGTAATGAATGGTCAAAAGGTGGATTCACTTGTTCCAATACCAGAAGTAGTAAATCATTTTGATAGTAATTCTAGCATGCTGTATACACCAGAATCGGACCCAATCGCTATTCATGCAATCGATTCGGATTTAAAACATGAAATTAAGGAGGATATGGATGAACAGATTAATATTCATGATCAAGACAATGCAGAATTTAGCGATGCCGATGATATGTTCGAGGGAATCCACAATGTTGTCAATAAAGTTGAAGATGATTCCGATTGGTATGACGAGGAGGAATTTCATGCCACAATGTCGTTTAAACCGGGCATTTTGGATGATGATGACTTAGATGTGATCGTCCAGAAAGAAGATTCGAACGAGAGAGTTTCACTCAAACTAGGAAATGACGCGCCACAACAAATTGGTGATAATATAACAGATTCAGAGAGTAATATTCTTGCAGCCAACAAAAAAGATGAATCGGTTAAAAGCGGAACAAAAAAAGAAGGCAGTAAGAAAGGCGATAAACCTTGGGCCAAATGCTTAATTTGTGATAAGCGGTTCAAATCCAAGAATGCTTTTCAGTATCATGAAACAACACACTCGGGTGTACGGCCTCATCAATGTGAGGATTGTGGTAAATGTTTCTCGTCAATTGGCGCACTTAGAATACATTCAAGACTGCACACAGGTGTTCGGCCATATAAATGTCGATTCTGTGATCGACCGTTTCGACAATGGGGTGATATGAAATATCATATTACATCAATTCACACAAACGAAAAGAAATATCAATGTGAATTTTGTGGTAAAGGGTTTGCCCGCCGTTATTCATTAGTTGTACACCGCAGAATTCATACCGGCGAACGCAACTATCACTGTGATTTTTGTGATAAAACGTTTCGAGCAAGTTCCTATCTAGTAAATCATCGTCGAATTCACACCGGAGAGAAACCTCATGAATGTTCGATCTGCGGAAAAAAGTTTCGGGTACGAAGTGATATGAAACGCCATATGAATATACATACACGGCCGGTCACCAGACCACGAAAGGCACAagttagtaataaaaaaaacaccacTGTAGAGGAATCCGCTTCATTATCAAGTGCACCTCATCCAATTCCCATTATTGTTTCAGTAAAAAGTGAACACATCGAAAAGGAGTCAAATGATCCAGCTAACTCAGATCAAAACATAGAAATACTTCGTAAAGTATTATTGGTGGAAAGAAAAGCATCTTTAAGCGAACCAATAAATGCAAGTGGTCGAGCTAAGGTGAAGCTCGAAAATCCCGTTGATTTATAA
Protein Sequence: MPNLSNGVDNIAMNQNYQDELSKFNNAKGFRNLENGALHLVAVQREDDNLIDVAFLNSQNLLANSIIVGPNGIGNTQTLIDGQYTVNFIDENYQLNEQQVNQHSNDIQLQPAIFQMVNTKLVNPGGQSVMFPVHNDPDLTAINRRGSTTSLKDMATLTPISQELQTDLLKQSYQNVPLPPLTPIRKLKTPNNTRRNAKLQNDNKIKVESSDSDYVAHEQMDCHLQCVSLQESNNLQLSEQLPINIKGDLPHKKRITKKIKKQPIKKATETRPNMNQHQNENNQIENSGTKFGCQLCNATIFGQLDFFAHLKGHYEPNSIVMNGQKVDSLVPIPEVVNHFDSNSSMLYTPESDPIAIHAIDSDLKHEIKEDMDEQINIHDQDNAEFSDADDMFEGIHNVVNKVEDDSDWYDEEEFHATMSFKPGILDDDDLDVIVQKEDSNERVSLKLGNDAPQQIGDNITDSESNILAANKKDESVKSGTKKEGSKKGDKPWAKCLICDKRFKSKNAFQYHETTHSGVRPHQCEDCGKCFSSIGALRIHSRLHTGVRPYKCRFCDRPFRQWGDMKYHITSIHTNEKKYQCEFCGKGFARRYSLVVHRRIHTGERNYHCDFCDKTFRASSYLVNHRRIHTGEKPHECSICGKKFRVRSDMKRHMNIHTRPVTRPRKAQVSNKKNTTVEESASLSSAPHPIPIIVSVKSEHIEKESNDPANSDQNIEILRKVLLVERKASLSEPINASGRAKVKLENPVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01052635;
90% Identity: iTF_01052635;
80% Identity: -