Basic Information

Insect: Nephrotoma guestfalica
Gene Symbol: -
Assembly: GCA_963691935.1
Location: OY829914.1:188408215-188411267[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00038 0.074 15.4 3.1 1 23 184 206 184 206 0.98

2 14 0.75 1.5e+02 5.0 4.8 2 23 209 227 208 227 0.88

3 14 0.0005 0.099 15.0 0.5 1 23 233 255 233 255 0.98

4 14 0.021 4.1 9.9 1.3 3 19 263 279 261 279 0.96

5 14 0.61 1.2e+02 5.2 1.2 2 14 339 351 338 361 0.83

6 14 0.0023 0.44 12.9 0.6 1 23 388 410 388 410 0.96

7 14 0.0014 0.27 13.6 2.3 1 20 416 435 416 438 0.92

8 14 0.003 0.6 12.5 0.7 2 23 447 468 446 468 0.97

9 14 6.2e-06 0.0012 21.0 0.2 3 23 476 496 474 496 0.97

10 14 2.6e-05 0.0052 19.0 4.5 1 23 502 524 502 524 0.99

11 14 2.2e-06 0.00044 22.4 0.5 1 23 530 553 530 553 0.96

12 14 0.001 0.2 14.0 0.9 1 23 559 581 559 581 0.99

13 14 0.36 70 6.0 7.7 1 23 587 609 587 609 0.96

14 14 0.00035 0.069 15.4 1.6 1 23 615 638 615 638 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00038	0.074	15.4	3.1	1	23	184	206	184	206	0.98
2	14	0.75	1.5e+02	5.0	4.8	2	23	209	227	208	227	0.88
3	14	0.0005	0.099	15.0	0.5	1	23	233	255	233	255	0.98
4	14	0.021	4.1	9.9	1.3	3	19	263	279	261	279	0.96
5	14	0.61	1.2e+02	5.2	1.2	2	14	339	351	338	361	0.83
6	14	0.0023	0.44	12.9	0.6	1	23	388	410	388	410	0.96
7	14	0.0014	0.27	13.6	2.3	1	20	416	435	416	438	0.92
8	14	0.003	0.6	12.5	0.7	2	23	447	468	446	468	0.97
9	14	6.2e-06	0.0012	21.0	0.2	3	23	476	496	474	496	0.97
10	14	2.6e-05	0.0052	19.0	4.5	1	23	502	524	502	524	0.99
11	14	2.2e-06	0.00044	22.4	0.5	1	23	530	553	530	553	0.96
12	14	0.001	0.2	14.0	0.9	1	23	559	581	559	581	0.99
13	14	0.36	70	6.0	7.7	1	23	587	609	587	609	0.96
14	14	0.00035	0.069	15.4	1.6	1	23	615	638	615	638	0.97

Sequence Information

Coding Sequence: ATGGCAATATTAACACTAAAGCaaagaatatttattgttaaacgTTATTATCAGTCTGGCAATTGCACCGAAAAGGTTCAAAATGAATTTCCTGGTGTGTTCAACCAAATGGAGTTGCCTACAAATGAACACATAATTGATTTAGTTAATATATTTGAAGAATTTGGAAGTGTTGTGTTGTATACGAATGAACAAAAGCTTGGGAATAGTGTTTATACAAATGAGGGTATTTACGGAATCGATACAAATGCTGATTCGAACGAAGTCACAtctgaaataaaaatcgaaTCGCTTCTCCCAACGGCCGACCGTAGTGAATCGAAGGAAGatgaatttgtgataaaaaatgaattgatAACAAcgctaaatgaaaatatttcagaactggtaaacaattttaatgacgACTATGAAGTCGAGAATGATAAAAGTACTGACGAGGATGAGAGCGAAGTGAATAAACAATCGACGATTGATTGTTCTCGGGATGATATTGAGGAAAATAATTTCGAAGCTATTAACTCTAATACAAATCTAGAAGATAAAGTATATACATGCAAAACATGTCAGAAAACCTTTAAAATACGTCGAGCATATTCAAAACATCTCAATATTCATAGAAAGGAATGTCATCTATGTGGAAAAGTCTGCAAAGACCTCCTGAAACATATGGCTAAGCATACAGGTGAACGAATTTATCAATGTACCGAATGTGGGTCACAATTTAAGAGTATGGAAAGATTAAAGGAACATCAGGCGGTACATTCAGATGATCGTCCATTTGGGTGTGAAACGTGtccaaagaaatttaaaacacGCAAAAGACTTCGAGATCATGATGATACCGAAGATTCTACGTATAACAGTTTTGAATTAAAACGAGAAATTAATCCGTTATCAACTGATGATGAATCGTCCAAATTTTCTGATACCGGAAACGATAACGAGCATTCAATAAGTGGCGATAAATCCGAGTCGGACGAATCTGTGGAATCCACTGAAACTAATGAGGTTTCATGTGGGCAATGTGATAAAACATTTCATTCAAAACGAACTGATTCACAGCATTTCGACAGCGTCCACGAACACGAATGTAAAATTTATCAGAAAAATTGTAGCAATATGGTTAAACCTAGACCTACGCATACTAGTAAACGCTTGTATCAATGTGGTGATTGTAATTCCTTATTTAAGAAAAAGGAACAGCTTAAAGAGCACTCGGCCGTGCATTCCGAAGAGAAGCCGTTTACATGTGGCACctgtcaaaaatcatttaagacaCGGAAACGACTAAAGGATCACGAGCCAACGCATTTAAAGAATGAAGAGCGTCCCGTAAAGTGCGAAGTATGTGGCAAAGGATTCCTTACTAAACTTCTACTAAAACTTCATTTTAGAAAGCATACCGgtgaatttcaatcaatttgtaatatttgtgaCCAGGCTTTATCGTCAAATTATGCCTTGAAAGTTCATATGAGAACGCATACCGGAGAAAAACCGTTCAAATGTCCGTTTTGTGACAAAAAATACAGTACCGCCTGCAGTTTAAGAAGTCACAAACGAATTCATACTGGGGAGAAACCGTTCATATGCAATGATTGCGAGAAATCATTTGTTTCGAGTAGTACGTTAAAAATACATAAGGAAACGATACACACTGGAGAAAAACCGTACCAGTGTCAGTTATGCGataacaaatataattcaaagaACGGATTACTAATCCATAAGCGAGTGCACACGGGCGAAAAACCTTATTTATGTCAACACTGTTCAAAATCGTTTTATGATATGACCACTTGTCGTAAACATGAACGAACCCATACTGGAGAGAAGccatataaatgtaaaatatgcgAAAAGGCACATAACCAATTAGGCAATTTAAAAACTCATATGAAGCTTGTGCacaaacaagtaaaataa
Protein Sequence: MAILTLKQRIFIVKRYYQSGNCTEKVQNEFPGVFNQMELPTNEHIIDLVNIFEEFGSVVLYTNEQKLGNSVYTNEGIYGIDTNADSNEVTSEIKIESLLPTADRSESKEDEFVIKNELITTLNENISELVNNFNDDYEVENDKSTDEDESEVNKQSTIDCSRDDIEENNFEAINSNTNLEDKVYTCKTCQKTFKIRRAYSKHLNIHRKECHLCGKVCKDLLKHMAKHTGERIYQCTECGSQFKSMERLKEHQAVHSDDRPFGCETCPKKFKTRKRLRDHDDTEDSTYNSFELKREINPLSTDDESSKFSDTGNDNEHSISGDKSESDESVESTETNEVSCGQCDKTFHSKRTDSQHFDSVHEHECKIYQKNCSNMVKPRPTHTSKRLYQCGDCNSLFKKKEQLKEHSAVHSEEKPFTCGTCQKSFKTRKRLKDHEPTHLKNEERPVKCEVCGKGFLTKLLLKLHFRKHTGEFQSICNICDQALSSNYALKVHMRTHTGEKPFKCPFCDKKYSTACSLRSHKRIHTGEKPFICNDCEKSFVSSSTLKIHKETIHTGEKPYQCQLCDNKYNSKNGLLIHKRVHTGEKPYLCQHCSKSFYDMTTCRKHERTHTGEKPYKCKICEKAHNQLGNLKTHMKLVHKQVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -