Basic Information

Insect: Nephrotoma guestfalica
Gene Symbol: -
Assembly: GCA_963691935.1
Location: OY829915.1:47423550-47428436[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00028 0.055 15.8 0.4 1 23 170 192 170 192 0.96

2 28 0.00016 0.032 16.5 0.9 2 23 197 218 196 218 0.95

3 28 1.7e-05 0.0033 19.6 0.4 1 23 223 246 223 246 0.97

4 28 3.2e-05 0.0063 18.7 3.5 1 23 252 274 252 274 0.98

5 28 0.00071 0.14 14.5 4.4 1 21 376 396 376 397 0.97

6 28 0.97 1.9e+02 4.6 1.3 2 20 413 431 412 434 0.94

7 28 7.1e-05 0.014 17.6 2.2 1 23 440 463 440 463 0.97

8 28 0.026 5.1 9.6 1.0 3 23 475 495 473 495 0.93

9 28 0.0037 0.72 12.2 2.1 1 23 501 523 501 523 0.97

10 28 0.0001 0.02 17.1 0.2 2 23 529 550 528 550 0.97

11 28 5e-07 9.8e-05 24.4 0.6 1 23 555 577 555 577 0.99

12 28 0.046 9.1 8.8 4.8 1 23 583 606 583 606 0.98

13 28 5.9e-05 0.012 17.9 0.9 2 23 613 635 612 635 0.96

14 28 0.00096 0.19 14.1 1.3 1 23 641 664 641 664 0.96

15 28 0.00019 0.037 16.3 0.2 1 23 840 862 840 862 0.98

16 28 9.1e-05 0.018 17.3 2.5 2 23 867 888 866 888 0.96

17 28 1.3e-06 0.00025 23.1 1.2 1 23 893 916 893 916 0.97

18 28 1.4e-05 0.0027 19.9 3.6 1 23 922 944 922 944 0.98

19 28 0.00059 0.12 14.7 5.1 1 21 1028 1048 1028 1049 0.96

20 28 0.29 56 6.3 0.1 2 23 1065 1086 1064 1086 0.96

21 28 0.00096 0.19 14.1 0.9 1 23 1092 1115 1092 1115 0.97

22 28 0.022 4.3 9.8 0.1 3 23 1124 1144 1122 1144 0.95

23 28 1.4e-05 0.0027 19.9 0.8 1 23 1150 1172 1150 1172 0.98

24 28 0.00065 0.13 14.6 0.1 2 23 1178 1199 1177 1199 0.95

25 28 1.5e-05 0.0029 19.8 0.4 1 23 1204 1226 1204 1226 0.99

26 28 0.00087 0.17 14.2 6.0 1 23 1232 1255 1232 1255 0.98

27 28 6.4e-06 0.0013 20.9 2.2 2 23 1262 1284 1262 1284 0.96

28 28 0.00019 0.037 16.3 5.4 1 23 1290 1313 1290 1313 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00028	0.055	15.8	0.4	1	23	170	192	170	192	0.96
2	28	0.00016	0.032	16.5	0.9	2	23	197	218	196	218	0.95
3	28	1.7e-05	0.0033	19.6	0.4	1	23	223	246	223	246	0.97
4	28	3.2e-05	0.0063	18.7	3.5	1	23	252	274	252	274	0.98
5	28	0.00071	0.14	14.5	4.4	1	21	376	396	376	397	0.97
6	28	0.97	1.9e+02	4.6	1.3	2	20	413	431	412	434	0.94
7	28	7.1e-05	0.014	17.6	2.2	1	23	440	463	440	463	0.97
8	28	0.026	5.1	9.6	1.0	3	23	475	495	473	495	0.93
9	28	0.0037	0.72	12.2	2.1	1	23	501	523	501	523	0.97
10	28	0.0001	0.02	17.1	0.2	2	23	529	550	528	550	0.97
11	28	5e-07	9.8e-05	24.4	0.6	1	23	555	577	555	577	0.99
12	28	0.046	9.1	8.8	4.8	1	23	583	606	583	606	0.98
13	28	5.9e-05	0.012	17.9	0.9	2	23	613	635	612	635	0.96
14	28	0.00096	0.19	14.1	1.3	1	23	641	664	641	664	0.96
15	28	0.00019	0.037	16.3	0.2	1	23	840	862	840	862	0.98
16	28	9.1e-05	0.018	17.3	2.5	2	23	867	888	866	888	0.96
17	28	1.3e-06	0.00025	23.1	1.2	1	23	893	916	893	916	0.97
18	28	1.4e-05	0.0027	19.9	3.6	1	23	922	944	922	944	0.98
19	28	0.00059	0.12	14.7	5.1	1	21	1028	1048	1028	1049	0.96
20	28	0.29	56	6.3	0.1	2	23	1065	1086	1064	1086	0.96
21	28	0.00096	0.19	14.1	0.9	1	23	1092	1115	1092	1115	0.97
22	28	0.022	4.3	9.8	0.1	3	23	1124	1144	1122	1144	0.95
23	28	1.4e-05	0.0027	19.9	0.8	1	23	1150	1172	1150	1172	0.98
24	28	0.00065	0.13	14.6	0.1	2	23	1178	1199	1177	1199	0.95
25	28	1.5e-05	0.0029	19.8	0.4	1	23	1204	1226	1204	1226	0.99
26	28	0.00087	0.17	14.2	6.0	1	23	1232	1255	1232	1255	0.98
27	28	6.4e-06	0.0013	20.9	2.2	2	23	1262	1284	1262	1284	0.96
28	28	0.00019	0.037	16.3	5.4	1	23	1290	1313	1290	1313	0.97

Sequence Information

Coding Sequence: atgaataaagtAAATAGTGTTAAAATATGTCGGGCTTGTTTATCGGaaacctttatttattttaatatatacgaAACGCTCTATTATTTCAATACACGTCAGATACCAGATAAAGAAGTTCCAGTCGCTGATATTTATGAACGATTAACGGGGAAtactttaaatgaaaataatgaaaaactcccaaaatatttatgcttaACATGTCTAGAAAAGTTATTTAACGCCTGCGACTTTGTAGAATTATGTAAAAATTCTGAACAACAGTTGCAATCTTATCATAGTGCTGTAAACGATGATTGTAGTGAAATCGAAATTCTCGAATGTGCCGACATCAGTCTTGAAGAAGATGATAATAGCCAATCGGACGATCTTGAAGCCGGATCTAGTGAttcaaatgatgaaaatgattCATCCAGTGAAGATGGTGATCCTGATTGTGATTCTAACGCTAATAATGCATCTGTCGAAAGCAATGTACCGAAACCTAACAATTCTCGGACACGTTACGAATGCATTAAGTGTAATGAGGTTTTTAATAGAGCAGCCCAATTAAGGAAACACGAGAAAATGCATGCGGGGAACTGGAAGTGTTCAGAATGTGATAAAATACTTGCAAATAAGTATTCTTTGCGTCATCACATGGTACTGCACACTGGCAAACCATACGAATGTGTAGTGTGCAAAAAAAGATTTGCAGTTCCATCGGAATTGACCcgtcacacaaaaatataccataaaaatggtAAATCTTACGTATGTGATCAATGTCCTAAACGATACTATACGAAGAGCCATTTGACTAGTCACAAAATAACTCATctcaataaaaaacaagataatTCGCAAATTTCAGAGATTGATAATCATATAATGGTTAAAAATGACGATACTCAATACGAGGCAAATGAGCTAAAATATGAAGCCTCCGAAGCATCGAATACCAATAACTTTTCGACCGATGGTGaaactacaaattttaaagaatcCTCTCAATGTGAAAATGATTCTGCTTCACCGCATCGAAATTTTCCATTCAATACAAACACGAATGAAGAAAGTGACGCCCAATCGaataatgttaataaagaaAACGCACTCAACTTTGTTGAGGATACCGAATTTTATAGAtgtaaaacatgttttaaaaaatttcggcaTAAGGCCAATTATTTGAGTCACATGAAACTTCAATTAAACTGTAaagatgatttaaatacaaataacaatCCCCAGAAGTGTGATTACTGTGAGGTCATATCAGATAACGTTTATCAACTACGAAAACATTTAGAATGCCATTTGGATAAAGAACCGTTTAAATGTAAGCTATGcgaaaaaagttataaaacttgGATAAAATTGACGGTGCACACACGGCAAACTCACCTGACAAAAACCAAATATCGTAAAAGTCATTTATGTACTCTGTGTGGCCGTGGATTTTTCACCTCAAAACTCTTGGATGAACATTATCTTGCCCATCAAGGTattcgaaaatataaatgtgATACATGTGATAGTTCGTTCTGTACTGTGTACGGATTGAAACAGCACGCAACCATTCATACAAGAGATGTGCTGCAATGTAGTGAATGTGGcaaaattttggcaaataaaATGTCCCTAAAAAGTCACATGACCATACATTTTGGTAAGAAGTATCAATGTAcgatttgtgaaaaatattttccgaatcCGGCCACGTTAAATCGACACATGAAAAGTCATCGGGGCGAACGGAATTATGTATGCGATCGATGTTCAAAGCGATATACGTGCCGAGGACATTTAAACGAGCATATTAAAAAGATACATGAAAATCCAACAACGTTAAAATGTGATGAATGCGGTAATGAGTTTGCCCATCGAAGAGCTCTAAAGAAGCACATAAGGCTTGAGCAtgccgaaaaaaaaatatttaattgtgatGCGTGTGGGAAAACTTATGGTAGAAAATCAagATTgaaagaacataaaaaaaaagcaCATGCAATGTCCGTGGTCGCGGATTCCATACCTATAATACAAAACCAAATAGAACAGAATATAGCAATTTCAGTAGCTACCTATAATCAGCCAGATACTGGAATTATCATGGttgaaatgtttaaaactaATGAATGCATCAATCTGAACGAAAATGATGTAAACCTGCctaaatatatatgtttaacGTGTTTAGAACGATTATTTAATGCGTATGAATTTTTCGAGATTTGCAAATCATCGGACGATGAACTAAAAACTTTTGATCACGGTCAACCAAACATAGAAGCGGACAAATTAGTGGAGCAAGCCTCATCGATAGATGCCACATTAGACTATCGGTTGAATAGTGATGACAATAATTATGATGATCTAGATAACGAAAGGCAAGATGATGATCAAAGTAGCTGTAGCAACGATGATGATGATAGGGATCCAGATTTTGTAGCTCCTAGCCAAATCAATAGTATAAGTACTGTGGACGAGGATGGGAATACGTCAAAGTCAAgtgatcaaaataaaaaaatattcgaatgccTGAAGTGTAATGAGGTGTTCAATGGCTCAATTGAATTAAAGCGCCATGAACGAATTCATGAGGGTAATTGGTCGTGCACCGAGTGTGATAAAGTTTTAACTACCAAATATACGTTTCGTCATCATATGATGCTACATATGGGAAAACCGTTCGAGTGTAAGGTCTGCACAAGACGTTTCTCACGTAACGCCGAATTAACCCGacacattaaaatttaccatttgaaGGGCAAATCCTACAAATGTGATGAATGCCCGAAACAGTTTTACACGAACAGTCACTTAAGATCCCATAAAATTAGCCATGCAAAgaaaaaacgaaagaaaaatgaaatggaaTATTCGAGCAACGATATGGAAGTTATTAACCAAAATGTAAATGGGACACTACAAGAAAATGCATCTACCATACGCCCCGTTGAAACCAcgacaaacattaaaattgaacCGCGAGAAATTCGAAACTTCCCTTTTAACATGAGCGGAGAAATTGAGCCGAATGAAGCCGTTGTAAAACAAGAAAAGCCTTTTAAAAATGATgcaatcacaaaattttatagatGCAAAAAATGTTTCAAGAAATTCCGACACCGTAATAATTATATACGacacttaaaaattattagcaATTGCCAGGCTGATTTAAACTGTCGAACGAATCCCCAGAAATGTCAATACTGTCCGGTAATATCAGATAATGTAACCGGTCTTAGAAAACACTTGGAATTGCATATGGATCAAAATCCATTTCGCTGtaaaatatgcaataaaaattataacgcGTGGCGAACGTTAGCCGAGCACACTCGACAAATGCATttaatgaagaaaaaatatcatttgtGTACGGTGTGTGGCCGTGGCCTTCCGTCGGCCAAATTACTTGAGGAACACTATTTGGTACATCAAGGAGTACGTAATTATAAGTGTGAATATTGCGACCGTGCATTTTATACAAATACTGGTCTCAAACAACACACAGCCATACATACCCGTGACTCGTTACAATGTAGTGAATGCGGTAAAATTTTGGCGGACAAAGTTACACTTCGAAATCATTTGACGCTCCATttcggtaaaaaatttaaatgttcgaTTTGTGAGAAACTATTTCCTAATGTTGGTACCCTCAATCGCCACATGAAAGTTCACCGGGGTGATCGGGATTTTCAATGTGATCGCTGTTCCAAATGCTATATGCGCAGAGGACATTTGAAAGATCATATTAAGAAAGTGCATGAAAATCCAAATACGAATACCTGCGAGGAATGTGGCAAGGAATTTACTCATCGTGGCTCGCTAAACAAGCATCGCCGATTAGAACATGGCGAAAAACCCGTGTTTAGATGTAATGAGTGCGGAAAATGTTTTGGAAGGAAATACAGATTAACGGAACATCGCAGTAAATTCCATTATGAGAATCTAGACACTAGTAACCAAATAGAGGATGAAACCGATCTCCTGGACGAAGAAAGTTTAAACGCGTTTGCTGAAAATGGTtga
Protein Sequence: MNKVNSVKICRACLSETFIYFNIYETLYYFNTRQIPDKEVPVADIYERLTGNTLNENNEKLPKYLCLTCLEKLFNACDFVELCKNSEQQLQSYHSAVNDDCSEIEILECADISLEEDDNSQSDDLEAGSSDSNDENDSSSEDGDPDCDSNANNASVESNVPKPNNSRTRYECIKCNEVFNRAAQLRKHEKMHAGNWKCSECDKILANKYSLRHHMVLHTGKPYECVVCKKRFAVPSELTRHTKIYHKNGKSYVCDQCPKRYYTKSHLTSHKITHLNKKQDNSQISEIDNHIMVKNDDTQYEANELKYEASEASNTNNFSTDGETTNFKESSQCENDSASPHRNFPFNTNTNEESDAQSNNVNKENALNFVEDTEFYRCKTCFKKFRHKANYLSHMKLQLNCKDDLNTNNNPQKCDYCEVISDNVYQLRKHLECHLDKEPFKCKLCEKSYKTWIKLTVHTRQTHLTKTKYRKSHLCTLCGRGFFTSKLLDEHYLAHQGIRKYKCDTCDSSFCTVYGLKQHATIHTRDVLQCSECGKILANKMSLKSHMTIHFGKKYQCTICEKYFPNPATLNRHMKSHRGERNYVCDRCSKRYTCRGHLNEHIKKIHENPTTLKCDECGNEFAHRRALKKHIRLEHAEKKIFNCDACGKTYGRKSRLKEHKKKAHAMSVVADSIPIIQNQIEQNIAISVATYNQPDTGIIMVEMFKTNECINLNENDVNLPKYICLTCLERLFNAYEFFEICKSSDDELKTFDHGQPNIEADKLVEQASSIDATLDYRLNSDDNNYDDLDNERQDDDQSSCSNDDDDRDPDFVAPSQINSISTVDEDGNTSKSSDQNKKIFECLKCNEVFNGSIELKRHERIHEGNWSCTECDKVLTTKYTFRHHMMLHMGKPFECKVCTRRFSRNAELTRHIKIYHLKGKSYKCDECPKQFYTNSHLRSHKISHAKKKRKKNEMEYSSNDMEVINQNVNGTLQENASTIRPVETTTNIKIEPREIRNFPFNMSGEIEPNEAVVKQEKPFKNDAITKFYRCKKCFKKFRHRNNYIRHLKIISNCQADLNCRTNPQKCQYCPVISDNVTGLRKHLELHMDQNPFRCKICNKNYNAWRTLAEHTRQMHLMKKKYHLCTVCGRGLPSAKLLEEHYLVHQGVRNYKCEYCDRAFYTNTGLKQHTAIHTRDSLQCSECGKILADKVTLRNHLTLHFGKKFKCSICEKLFPNVGTLNRHMKVHRGDRDFQCDRCSKCYMRRGHLKDHIKKVHENPNTNTCEECGKEFTHRGSLNKHRRLEHGEKPVFRCNECGKCFGRKYRLTEHRSKFHYENLDTSNQIEDETDLLDEESLNAFAENG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -