Ngue006542.1
Basic Information
- Insect
- Nephrotoma guestfalica
- Gene Symbol
- -
- Assembly
- GCA_963691935.1
- Location
- OY829913.1:93246639-93247100[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-09 1.2e-05 26.8 0.1 8 39 15 45 12 50 0.84
Sequence Information
- Coding Sequence
- ATGGGCAAAACAAAGAGAAAAAACCAACCAACCGTACTTCAAGCTATTACGGCCATCGAAAATCGAATCAGCATTCACGCAGCAAGTAAAATATATGGAATACCAAAAACcacattattatataaatataatggaAAACGGCCAATATCGGGTAAATCTGGACCCCCAACCATCTTAACCCTAGAAGAGGAGAAAATATTAGTAGATTGGATTATTCAAATGGGTAAAGCAGGCTTCCCGATAACAAAAATCCAACTACTTGATAGCGTcgctgttttaataaaaaaatttaaaaagccaaACAATTTTACCAATGGGCGGCCAGGTCGAGCATGGTTTGAGGGATTTCTCAGACGGTACACCGAGATATCGCAGCGTCTTAcaaagaaattacaaaaatatcggTCCATTTGCGAAGTAGCAAAATATTTCGAAAGGAAATATTATAAACGGAGTATTTAA
- Protein Sequence
- MGKTKRKNQPTVLQAITAIENRISIHAASKIYGIPKTTLLYKYNGKRPISGKSGPPTILTLEEEKILVDWIIQMGKAGFPITKIQLLDSVAVLIKKFKKPNNFTNGRPGRAWFEGFLRRYTEISQRLTKKLQKYRSICEVAKYFERKYYKRSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -