Ngue039672.1
Basic Information
- Insect
- Nephrotoma guestfalica
- Gene Symbol
- bab2
- Assembly
- GCA_963691935.1
- Location
- OY829914.1:259897146-259908731[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 1.3e-08 36.2 0.0 2 45 413 456 412 456 0.92 2 2 0.73 9.6e+02 1.4 0.6 4 20 545 560 544 560 0.91
Sequence Information
- Coding Sequence
- ATGAGTTGCAGCGAAGGGCAAACGTACTGTCTCCGATGGAACAATCACAAATCAAATTTGGTCGAGATACTCGACGCACTGATCAAAATGGAATCGTACGTTGATTGTACGATATACGTTGATGATCATGTGCAATTTAAAGCGCACCGTGTCGTACTCGCAGCTAATTCACCATATTTTCAAACCATACTGCAGGGTGTACCGATGGATCACTGTACGATACTGTTTCCCGAGGTACAGGCATTTGAAATGCGTGCGCTCCTGGAATACATGTATACGGGCGAGGTGAATGTTACACAATCACAGATACCCAGAATTATGAAAATAGCACGTGATTTAGAAGTTAAAGGACTATACGATATGGCCGATTTAAAAGACTTGAAAGATGAACCTCAACATTTTAGTGGAATTAAATCTTCACCGACTAATAATAgcataaataataacaacaacagtagtaatagtaataataataataacaacagtaataatcatcataataatagtaataattcgTCAACATCATCCACAACTCATTCCactagtaataacaataataataacattaacagtagtaataatagtaatcatCACACAAATAGCAACAATACTACACCGAAccatcatcaacatcatcaatCTTCGCCGGTCATATCCACCTCGACAAATATTACACAGGCCCAAAGTAGTTCATCATCACCGCCATATAGTTATAAATCACCGTACTCGAGCCTGTATTCACGATCACCAGTCCAAACCGGTGCCTCCGATCGTTTACCACAATGGCCACATTTACCACCCACCTTGCCTGCCCAACATTTACACAATGCCGCCGCCATGCTTTCGTCCGTTTACGATTCGGGTTCGGATATGAATCCACTAAAACGGAAAAAATTATCGTCCATTTCAAGCATGCTAATGTCACGTGATACGCCCATTTTACGGAATGTGCTAGCGCAGCCGAATGTTGCCGATTCGTCACAGCCAGTGCCACTTGTTTGCCAGCCATCGTTGGTGGTGGATGCGGATCGGAGTGAACGACATAATTCGCATTCGAATGGAACTGATTACTCGGATAAgAAAGTTAAGTACGAGGAGCCACATTCACCATACACAGATAAATCATTTGAGGATGATTCAATGGATCCAGGACAATCATTTAGTGGATCCGATTCGAGAATAGCGTCGTATGTGCCACAACAGAAACCGGAATGGAAACGATACAAGCAATACACACGGAATGACATCTTATCGGCGATCGACTGTGTCCGGAATGGCATGTCTGCGTTGCAGGCCTCCCGTAAATTTGGTGTACCCTCCCGCACTCTATACGATAAAGTGAAAAAATTGGGTATTACGACGGGGCGACCGATGAACCGGAGTATGAAACGCAGTCCAAGTCATGGCCATGGAAATAGTCAGGCTGGATTCCCGTACGGTTTGACCGGCACAAATAGTCCATTTGGCCACCATCAACTAGAAAATCCATCACAGTCGAACGATAATGATCGGGATCATTTACCACCGACGATACCACATCCTGCTGCCGCCCTCTTAGACGCAACTTTTTTACAGCAGGCCTTAGAAGCACGTGGTGGTGATATTGCGGGTCGTGAAGCATTACATGCGATGGCATTCGCGGCCGCTGCACATGCCGCTGTAAATGGTATATCGACGAGTCCTGGAACCCATGGCACAGCACGATCACCAAGTCCTGGCATCCTAATGAAATATGTTCGACCATCGACACCGTCACCAATGGCGTCCCATCATCAGCATCACAGCGATATGATGATGAAAGATGTGGACGATGATCATGTCGAGGATTTATCAATGTCGAAAAAAGATTCATCGGATCGTTCAACGTCATCACCGCAATCGCAACATAGTGTAGCGAGTCCGCCATTATCGCCACCTCAATTGCCACCATTGCCACTACCGAGTCAAATGCATGTGCACCAACAATTAGGGGTTATAGTTCCACCAATGACTAAGGTATCCACCCCTAAGGATGACTACGGATGCAATGATGtgaaaagggaaattttaacCACCGAAGAAGATTCGAGAGattaa
- Protein Sequence
- MSCSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIYVDDHVQFKAHRVVLAANSPYFQTILQGVPMDHCTILFPEVQAFEMRALLEYMYTGEVNVTQSQIPRIMKIARDLEVKGLYDMADLKDLKDEPQHFSGIKSSPTNNSINNNNNSSNSNNNNNNSNNHHNNSNNSSTSSTTHSTSNNNNNNINSSNNSNHHTNSNNTTPNHHQHHQSSPVISTSTNITQAQSSSSSPPYSYKSPYSSLYSRSPVQTGASDRLPQWPHLPPTLPAQHLHNAAAMLSSVYDSGSDMNPLKRKKLSSISSMLMSRDTPILRNVLAQPNVADSSQPVPLVCQPSLVVDADRSERHNSHSNGTDYSDKKVKYEEPHSPYTDKSFEDDSMDPGQSFSGSDSRIASYVPQQKPEWKRYKQYTRNDILSAIDCVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRSMKRSPSHGHGNSQAGFPYGLTGTNSPFGHHQLENPSQSNDNDRDHLPPTIPHPAAALLDATFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGISTSPGTHGTARSPSPGILMKYVRPSTPSPMASHHQHHSDMMMKDVDDDHVEDLSMSKKDSSDRSTSSPQSQHSVASPPLSPPQLPPLPLPSQMHVHQQLGVIVPPMTKVSTPKDDYGCNDVKREILTTEEDSRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454973;
- 90% Identity
- iTF_01456157;
- 80% Identity
- iTF_01054457;