Ngue060442.1
Basic Information
- Insect
- Nephrotoma guestfalica
- Gene Symbol
- retn
- Assembly
- GCA_963691935.1
- Location
- OY829915.1:259071854-259085000[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-21 4e-17 64.2 0.0 8 89 57 136 51 136 0.93
Sequence Information
- Coding Sequence
- ATGGTGATTAATAATGCACCATGTCATGCTGCCATTGAGGAAGTATTCCTAGAAGAGGAATTTCTTAATAATCAGCTACTAAGATTCGCGCCATATAGTCCGATGTTAAATGCAATTGAATATGTTTGGTCAAACTTAAAATCTGGAGTCAAAAGCGATTTAACTATCCAATTACCGCGAATCCTAGCTAATGAAGgaacCCCAATAAATCGCCTGCCCATAATGGCGAAATCGGTGCTGGATCTCTACGAACTATACAATTTGGTTATAGCGCGCGGCGGTCTAGTGGACGTGATCAATAAAAAGCTTTGGCAGGAAATTATCAAAGGATTACACTTACCGTCGAGTATTACAAGTGCAGCGTTTACCCTACGAACACAGtacatgaaatatttatatccaTACGAAtgtgaaaagaaaaatttgagttCACCATCCGAGCTACAGGCGGCGATTGACGGTAATCGGCGTGAAGGACGTCGATCGAGTTACGGCCAATTTGATTCACAACTTCAAGGACAACTCCAAATGCCACAAGTACAACGATCACCGGTTCCGCCTAGTATGCAGCAGATGTCACCATTATCTTTGGTTACGCATGGTAATACACCGGCAGCGCACCATCGTCTAATGGGTGGACCAAGCATTGGACAAATTTCTAGTTTGGTACCACACGAGATTGAGCAGCGTATGATGGAGTACATAAAATTGTTCCAAACTCCGAAGGAGCCGCGTCGTAACGGTTCCCAGAGTCCTGACATATCACAGCGCGATGCATTAAATGCGCTTGAAATGTCGCGCGTTGCATTATGGTCCATGTACAATAATAACACAAGTCCTCCGACTTCAATAAACACAAGTCCGCCCGGTACCGAGCCCCAACGCGAAGCATTAAATTTAGCTGaatcaccaccaccaccacctccACCACCAGCAACACATATCCCAATTAAACGAGAACGGGTCGAGCATCCAGTTGATTTTGACGATCATGATTTTGTGCAACCACCGCCTGCCAAACGAGGACTTAACACATCAAATGAAGAGCGGAATGAACGTTCCAGCACACCAACAAGTCAAACAGAGGCGGCCAGTCCACTAAAGCGTGCTGATAAAAAAGTACATAATGGCGACAGTAATTTATTAGATAATAAACATCCGAcacacaataacaacaacactattaataataataataataacacgaataataataatgtgaCAATAAATAATGGAATGCATTTTAATATAGCAAGCAGAGGTCATGCATCATCTGGCGATCAGCAACTAGTAATCTCAATAGAATTTAACGGAACACTGTACGAGGGTGTCCTTTTCGCGAAACCCACGTCGACCTCATCTCATTCGTCGTCACATTCGCAAAACTCGTCGCCGATAAAATCCGCAAATGTTTCTACAACACAAACCCCAACTACACCGTCGTCCACCTCAAATGTTGTTGTAAATAGCCCTATAGAACGGACCTCCCACCCATTGGTctcttcataa
- Protein Sequence
- MVINNAPCHAAIEEVFLEEEFLNNQLLRFAPYSPMLNAIEYVWSNLKSGVKSDLTIQLPRILANEGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPSELQAAIDGNRREGRRSSYGQFDSQLQGQLQMPQVQRSPVPPSMQQMSPLSLVTHGNTPAAHHRLMGGPSIGQISSLVPHEIEQRMMEYIKLFQTPKEPRRNGSQSPDISQRDALNALEMSRVALWSMYNNNTSPPTSINTSPPGTEPQREALNLAESPPPPPPPPATHIPIKRERVEHPVDFDDHDFVQPPPAKRGLNTSNEERNERSSTPTSQTEAASPLKRADKKVHNGDSNLLDNKHPTHNNNNTINNNNNNTNNNNVTINNGMHFNIASRGHASSGDQQLVISIEFNGTLYEGVLFAKPTSTSSHSSSHSQNSSPIKSANVSTTQTPTTPSSTSNVVVNSPIERTSHPLVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01457122;
- 90% Identity
- -
- 80% Identity
- -