Basic Information

Insect: Nephrotoma flavescens
Gene Symbol: su(Hw)
Assembly: GCA_932525705.1
Location: CAKOBH010000314.1:286291-288493[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00068 0.12 14.6 0.3 1 21 67 87 67 88 0.94

2 13 0.02 3.6 9.9 0.1 2 23 128 150 127 150 0.93

3 13 0.3 54 6.2 0.7 1 23 156 180 156 180 0.98

4 13 4.5e-06 0.00081 21.4 3.3 1 21 186 206 186 207 0.96

5 13 1.6e-06 0.00028 22.8 0.2 2 23 220 241 219 241 0.96

6 13 1e-07 1.9e-05 26.6 0.6 1 23 251 273 251 273 0.99

7 13 5.8e-07 0.00011 24.2 0.5 1 23 279 301 279 301 0.98

8 13 0.00011 0.021 17.0 0.3 1 23 307 329 307 329 0.99

9 13 1.8e-05 0.0033 19.5 4.4 1 23 335 357 335 357 0.96

10 13 0.00033 0.059 15.6 2.1 1 23 363 386 363 386 0.96

11 13 0.0009 0.16 14.2 0.7 2 20 393 411 392 414 0.89

12 13 1.5e-05 0.0027 19.8 0.3 1 23 420 442 420 442 0.99

13 13 0.00046 0.083 15.1 4.5 2 23 449 471 448 471 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00068	0.12	14.6	0.3	1	21	67	87	67	88	0.94
2	13	0.02	3.6	9.9	0.1	2	23	128	150	127	150	0.93
3	13	0.3	54	6.2	0.7	1	23	156	180	156	180	0.98
4	13	4.5e-06	0.00081	21.4	3.3	1	21	186	206	186	207	0.96
5	13	1.6e-06	0.00028	22.8	0.2	2	23	220	241	219	241	0.96
6	13	1e-07	1.9e-05	26.6	0.6	1	23	251	273	251	273	0.99
7	13	5.8e-07	0.00011	24.2	0.5	1	23	279	301	279	301	0.98
8	13	0.00011	0.021	17.0	0.3	1	23	307	329	307	329	0.99
9	13	1.8e-05	0.0033	19.5	4.4	1	23	335	357	335	357	0.96
10	13	0.00033	0.059	15.6	2.1	1	23	363	386	363	386	0.96
11	13	0.0009	0.16	14.2	0.7	2	20	393	411	392	414	0.89
12	13	1.5e-05	0.0027	19.8	0.3	1	23	420	442	420	442	0.99
13	13	0.00046	0.083	15.1	4.5	2	23	449	471	448	471	0.96

Sequence Information

Coding Sequence: ATGGACGGTAAGGTGACCAAAGTGAAAATTGATGAAAATGAGGAAATCGAATATATTATTTCGACCGTTAATACGTCGGATGAAGAGGAAATAGTTGAAGAGTACATTATCGATGAGGAGGAAAATGAAGAGCCGGAATTGATTGAAACCGCCGATGGACGAACACTTATTATAATGGATCAATCGACCGTGGTGGAACATGTTTGTGGCAAGTGTGCCCAAACTTTTACAAGTCTTGATATGCTAAAGAAGCATATCTCGATATGTCGACTAAAAGATTCTGCGAAACAACCAAAATTTTACAACACTTATCCGAAAAAGAGAAAACTGTTATGCTTCTGTTGTGACGAAGAGAAGATCAAAGCGCACCAAGGGGTTATTCCGTGTCCCAAGTGTGATTTAAAATTTAATACCGCACTCGGCCGCGAACGACATATATTTTCATTACATGCTGATAGCACGGAATTCAAGTGCAAAATTCAATCGTGTAATGCTACTTGTCCCACGAAAGGTATTCTGGAGCTGCATATACTAACCCATGCCCCGACTAAGCCATTCGAATGTGATAAATGCGGTAGGGATTTTACCCGTAAATATCATTTAGAACGGCATTTAAAGCATACTACATGCGGCGGAGGTATCGATCAAGAAGTACTGCCGTGTGCTGTATGCGGAAAAAAATTTACGCGTACAGATAATTTACGAGAACATTTACGTGGTCATATGGGCCAGGCAACTAAGAAACGAGATTTTCAATGTCCATACTGTGAGAAGTCGTTTTATGGTTCGTCTCTTTTAAATATTCACATTCGTACTCATACCGGGGAAAAACCATTTCCGTGCGATATATGCCAGAAACCGTTTTCATCGACCGGAGCATTACGAAAGCATCGCCGTACACATACAGGCGAGAAACCTTATAAATGTCCAATTTGCGAATCAGCGTTTAGTGCGAAAGAAACATTCAATCGACACGTTAAAATTCACACGGGCGATCGACCACACAAATGCAATATTTGTAATAAGAGTTTTATTCAAGGTTCGCAACTTAAAGCGCACATGTTTCACCATACAGGGGAAACTGGATTTGAATGTAAATTATGTTTTCGTGTGTTTAATAGGAAACAAAGGCTCCTCGATCACATGAGATTCATACACGAGGGTGAGAGACCGATTAAATGTCCTCATTGCCCTAAAACTTTTGTAGCGATTTCCGATTTTCGGCGGCACGACAGGGCGCATTTAGGAATTAAAGATTTCAAGTGTGATGTATGCCAAAAGGAATTTGGAACAAGAGCTATGTTGGTGAGTCATTTACGTGTTCACACAACAGAAGATCCTTGTACTTGCGAATTATGCGAGAAAAGATTCATCCGATTTGATTGTCTTCTGAGACACATTCGTTCTGTACATCGTGAAGCGCTTTTTGAAGTAATCATCGAAGAAGAACGCAAACGCTTAAAATTCATAAAAAGTTCAGCGGTGTTAAGGATGGATGGGATTAAGAAACCATCGACAGCCACTTCCACTGCAGCTAAGGAGGAGGATTCAAAGTCGGGCGACGAAGAAATTGAAATTGATGAAAGTTATGTTGATTACGATGACGATGATGACGAGGTTGTTATGGAATGTGATGAATCGGTTAGTATTCCCGACGATATAAAGCCGTCTCTTCAGAATACACCTAATAAATCTTCGGGATCCGATGTTACATTCATGGATGATGCGACGTTGAAGAAATCAATTTCACAACTTTTAAATTTGTTAGTAGATGAGGATACCCTGTCACAATTTGGATGGCCCAATGCTGGGGTTGAGGAGGTGCTCAGTTCGGTGATTAAACAATGCGGGCATAAGCCCGCGGATTATAAAGATTGTGCTGATTACACAACAAAAATGCGTGAAAACACTAAACTGCTTTTTACAGTGGTGATTGATGATGAATCAATTAAATCGCTGCTTAACAACCATACGATAGATGAAGTAATTTTGCGGGTCCTTAAAATGGCCCAGAATAAGTAA
Protein Sequence: MDGKVTKVKIDENEEIEYIISTVNTSDEEEIVEEYIIDEEENEEPELIETADGRTLIIMDQSTVVEHVCGKCAQTFTSLDMLKKHISICRLKDSAKQPKFYNTYPKKRKLLCFCCDEEKIKAHQGVIPCPKCDLKFNTALGRERHIFSLHADSTEFKCKIQSCNATCPTKGILELHILTHAPTKPFECDKCGRDFTRKYHLERHLKHTTCGGGIDQEVLPCAVCGKKFTRTDNLREHLRGHMGQATKKRDFQCPYCEKSFYGSSLLNIHIRTHTGEKPFPCDICQKPFSSTGALRKHRRTHTGEKPYKCPICESAFSAKETFNRHVKIHTGDRPHKCNICNKSFIQGSQLKAHMFHHTGETGFECKLCFRVFNRKQRLLDHMRFIHEGERPIKCPHCPKTFVAISDFRRHDRAHLGIKDFKCDVCQKEFGTRAMLVSHLRVHTTEDPCTCELCEKRFIRFDCLLRHIRSVHREALFEVIIEEERKRLKFIKSSAVLRMDGIKKPSTATSTAAKEEDSKSGDEEIEIDESYVDYDDDDDEVVMECDESVSIPDDIKPSLQNTPNKSSGSDVTFMDDATLKKSISQLLNLLVDEDTLSQFGWPNAGVEEVLSSVIKQCGHKPADYKDCADYTTKMRENTKLLFTVVIDDESIKSLLNNHTIDEVILRVLKMAQNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01053805;
90% Identity: iTF_01052496; iTF_01054588;
80% Identity: -