Nfla052594.1
Basic Information
- Insect
- Nephrotoma flavescens
- Gene Symbol
- -
- Assembly
- GCA_932525705.1
- Location
- CAKOBH010003359.1:9038-10117[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-11 1e-07 33.3 0.0 5 38 218 251 216 255 0.93 2 2 5.2e-09 7.7e-06 27.2 0.1 7 39 309 340 305 344 0.86
Sequence Information
- Coding Sequence
- ATGAGAAATTTTAAATCATTGGATTATAATCAGTATTTATTTCAATTTATATGTGAAAATAGTAATTACGATGTAAAAATAATACCAAACGATTCGACTGCGATTATTCAAGCTCACAAAATTATATTGGCGTCGGCAAGTGATTATTTCCATAACATATTTAAAGATCTTCCCAGCTCCGATGATGAAATATTCATTCATGTACCAGATTTTAATTATCGTTCAGTTAATTTAATAGTAAATTTTATATACATGGGCGAAATCGAAGTTAGTACAAATGAGTTAAATACATTTCTGGATTTATGCAATTTATTTTCGTTAAAAAGCTTTGATCGTCTTATTGCCAACGATGAAATGAGCTATAATGGAATAATGCTTCCTACTACAACAAATGACCAATATTATGAAAACTATAAAATTATTAAAACTGAGTATGAAGATGATATTTCGGAGTCACTGGAGCACTCCGATTACAACGAAAGTAATAGTTGTAATAGTACGCAAATGCCCATTGAAGAAGCTATCGCAGATATAAAAATTGAAAAACCAATCAGGGACAATTCTCTAAAGTACCCCAAACCTAAACCACCATTAAATTTGCAGAAAAGATTATGCGACTTACCAATAGAATTACGGAATAAATATAAACATCTCAATGAAGCTCTAAATTCTATTATTACGGACGGAATGAGCTACAAGAAAGCTGCAAAAATATACAAAATTTCATCTACAGTACTTTGGCGACGCGTTAAAATTTTAAAGCAAGCCCGACGAGCTATGGCAAATACAAAGAAAAAGATAAAACCAATTTCGCCTGAAATAGAAAACCGGGGAAAAACTGATGATGTTGATGATAATCTTCCACTTATAAATTTGTATCGTTTAAAGAGGAATTTGAGTACGGATATGAATCCACATATGCACGAAGCCTATCTCGCCTATAAAAATGGTATGCTACAAACTCGAGCGGCAGCGCTATATAACATACCCAAAACTACATTTTGGCGTTATGTAAAACGCATGGCCATTGAGGAAGGCCATATTACGTCCAGTACGACAATAGCGAATAATGGAACCTAA
- Protein Sequence
- MRNFKSLDYNQYLFQFICENSNYDVKIIPNDSTAIIQAHKIILASASDYFHNIFKDLPSSDDEIFIHVPDFNYRSVNLIVNFIYMGEIEVSTNELNTFLDLCNLFSLKSFDRLIANDEMSYNGIMLPTTTNDQYYENYKIIKTEYEDDISESLEHSDYNESNSCNSTQMPIEEAIADIKIEKPIRDNSLKYPKPKPPLNLQKRLCDLPIELRNKYKHLNEALNSIITDGMSYKKAAKIYKISSTVLWRRVKILKQARRAMANTKKKIKPISPEIENRGKTDDVDDNLPLINLYRLKRNLSTDMNPHMHEAYLAYKNGMLQTRAAALYNIPKTTFWRYVKRMAIEEGHITSSTTIANNGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01053529;
- 90% Identity
- iTF_01053529;
- 80% Identity
- iTF_01053529;