Nfla010343.1
Basic Information
- Insect
- Nephrotoma flavescens
- Gene Symbol
- kn
- Assembly
- GCA_932525705.1
- Location
- CAKOBH010000329.1:244438-248263[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-95 3.4e-90 304.8 0.1 249 385 16 152 8 155 0.97 2 2 3e-09 0.00019 21.7 13.0 422 503 155 239 152 268 0.71
Sequence Information
- Coding Sequence
- ATGTATGATGCTTATAGTATCTCAAGCCTCTATCCACCACTGCCAATAGCCCAACCGTGTATTAAAGCAATATCGCCGAGCGAAGGTTGGACAACTGGCGGTGCCCAAGTAATAATTGTCGGTGATAATTTTTTCGATGGACTGCAAGTGGTATTCGGTACGATGCTAGTGTGGAGCGAATTAATAACATCGCATGCGATTCGGGTACAAACACCACCACGTCATATACCCGGAGTCGTTGAAGTTACATTATCGTATAAAAGTAAACAATTTTGTAAAGGTTCACCGGGACGTTTTGTGTATGTTTCACTTACTGAACCAACAATAGACTACGGGTTCCAAAGGTTACAAAAACTGATACCACGACATCCTGGTGATCCAGAAAAATTACCTAAGGAGATTATTTTAAAGCGTGCGGCCGATTTAGCTGAAGCTCTCTATTCAATGCCACGGTCGCCAGGCGGTTCGACCGGGTTTAATTCGTATAGCGGGCAGTTAGCGGTTAGTGTGCAGGACGGTGGTGGACAATGGGGTGAAGATGATTATCAACGAGCACAAAGTAGTAGTGTTAGTCCTCGTGGTGGATATTGTAGTAGTGCATCGACACCTCATTCGTCCGGTGGTGGATCATATGGTGGTGGTGGTAATGGGTATGGGCCAGCCCCGAATATGGGCGCCCTATCATCGTCGCCGGCTAGTGTTTTTAATTCGACCTCAAGAGGACTTGTGAATGGTTTTAATCCATTTACATTGCCAACATGCAGTACTCAAGGATATACATCAAGTCCTCTAGTCACATCATCAAAATAA
- Protein Sequence
- MYDAYSISSLYPPLPIAQPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYSGQLAVSVQDGGGQWGEDDYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGGNGYGPAPNMGALSSSPASVFNSTSRGLVNGFNPFTLPTCSTQGYTSSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_01163736;
- 80% Identity
- -