Basic Information

Insect: Nephrotoma appendiculata
Gene Symbol: zfpm1
Assembly: GCA_947310385.1
Location: OX371223.1:382059211-382067520[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.6e-05 0.0036 19.7 0.8 1 23 337 360 337 360 0.97

2 13 0.0002 0.045 16.3 4.0 1 23 380 402 380 402 0.98

3 13 5.4e-05 0.012 18.1 0.4 1 23 408 430 408 430 0.98

4 13 8.9 2e+03 1.7 0.5 1 23 443 465 443 466 0.83

5 13 6.3e-06 0.0014 21.1 1.0 1 23 510 532 510 532 0.98

6 13 0.00085 0.19 14.3 6.6 1 23 538 560 538 560 0.97

7 13 0.034 7.5 9.3 1.6 1 21 566 586 566 587 0.94

8 13 0.00025 0.056 16.0 1.0 1 23 785 808 785 808 0.96

9 13 0.0034 0.76 12.4 5.1 1 23 828 850 828 850 0.98

10 13 0.23 51 6.7 2.2 1 14 856 869 856 870 0.91

11 13 0.0055 1.2 11.8 0.1 1 17 932 948 932 949 0.93

12 13 0.0029 0.64 12.7 2.9 1 23 960 982 960 982 0.97

13 13 0.017 3.7 10.3 4.3 1 23 988 1010 988 1010 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.6e-05	0.0036	19.7	0.8	1	23	337	360	337	360	0.97
2	13	0.0002	0.045	16.3	4.0	1	23	380	402	380	402	0.98
3	13	5.4e-05	0.012	18.1	0.4	1	23	408	430	408	430	0.98
4	13	8.9	2e+03	1.7	0.5	1	23	443	465	443	466	0.83
5	13	6.3e-06	0.0014	21.1	1.0	1	23	510	532	510	532	0.98
6	13	0.00085	0.19	14.3	6.6	1	23	538	560	538	560	0.97
7	13	0.034	7.5	9.3	1.6	1	21	566	586	566	587	0.94
8	13	0.00025	0.056	16.0	1.0	1	23	785	808	785	808	0.96
9	13	0.0034	0.76	12.4	5.1	1	23	828	850	828	850	0.98
10	13	0.23	51	6.7	2.2	1	14	856	869	856	870	0.91
11	13	0.0055	1.2	11.8	0.1	1	17	932	948	932	949	0.93
12	13	0.0029	0.64	12.7	2.9	1	23	960	982	960	982	0.97
13	13	0.017	3.7	10.3	4.3	1	23	988	1010	988	1010	0.97

Sequence Information

Coding Sequence: ATGTCTGCAGAAAATCAATGCAATCGCATATGTCGCACTTGTTTGACTCAAGAATTTAGTAATAATACGAGCAACTCCTTGTACACTTCGATTGACCTAGAAAATGGAGAGTCCTTAGAAATATTCAAAATTATTGAAAATTGTATAAATTTAGAGGTGAGGAATGCCGATCGTTTGCCCCAGATTATATGTAATAAATGCACAATGATGATTCGAAATTTTTACGTATTCCGGGACAAGTGCCACAAGAATGATACGTTCCTGCGAAACCAATTGGATACTTGGAAATTAAAATGTGAAATTAAAATCGAGGATGCAGTGGAAAATGTATTAGAAGTGCAAATGGGAAGTTTCGAGGAAAGTAAAATTATAGAATTTCCTGAAATATACGCTACCGGTCCAAAAGAGAGCTTTGGGAACACTGATAACGAAAATAAAAGTGAAATCGATATATTTGAAAATTGCCCTGGTGATCGAATATATGATGAAAGTTCAAATGATTTTAGCGAAAACGATAAAGATTTTGTTTTATCAGAGGGAAGAATTCTAGAAAATATGAAGTCATTTAATAAATATCCAAACACTAGAGGAAAAACCAAACAGCGTAAAACTGATGACGGAGAACAACAAAATATATACCACAAGTATGAAAGCACTGTAGATATTTTGAAGCCAACCAAAAAGTCCTCAACCACTAGAGTAAGGACTAAAAGGTTTTCTCATGATTCAGATGGGGAAAACGATCAAAACGAACAAAAAAATATATTCTATAAATATGAAAGCACTGGAGATATTCCTAAGCCATTTAAAATGTCCTCAAAACAGACTAAAATTTGTAATGCAGCTGAAAAAACAGTTGAAAACCAACAAAATATATCGCACAAACAGGACAGTACAGTAACTATTTCGAAGCCATCCAAAAAGTCCTCAACTAGTAAAATAGATATTAAAATGTGTATTCCTGGCCCAGATGGGGTACACGATCGAGAAGAACAACTAAAATTATTCTACAAATGTGATATTTGCTTCAAAGTCTTCGATAACCGGAAAGAATTGATAGTCCATCGTCGTGCCAAACACATTAACGAGATAAGCGAAGATCTCTATACGATTGAGAGAAAGGATAACAAAACACATTTTATCTGCAAAATTTGTAAAAAAAGTTGTAAACAAAAAAATGTATTGCGGGTTCATTTACGATCGCATACTGGCGAAAAACCGTACATGTGTCCCGTTTGCCCTCTACGTTTTGCCCAAAAAAGTCAATCCCAAAAGCATATGAAAGTTCATAATCTGGAGACCATCGAAACAAAAACAGCGATGTCTTATAAATGCGCCTTATGTCAAGTAGAATTCGAATCGGAGTTGGTGGTTAAAAGTCATTACGACGAGCATCATTCGCCTACCCAAGAAAAGGAAAAAATCCGTCTACTATCGAAACCTACTGAGTGGCAATTATGTGATATTTGTGGCGAATTTCGAAAAGATATAACGGATCATTTGAAGTGGCATGCTGGTAAAAAGAAGTACGAGTGCAAAATTTGTGGAAAAATTTTATCAACCCGCAGCTCACTATCGCAACATCGTCAGCGACACGCCGTTGACAAAAAACATGTTTGTGATACATGCGGCAAAAGTTTTAAAATTCAGCATTGCCTAACATTGCACCGAAGAGTTCATTTTGAAGAGCGTAAACATGAATGTCACATATGCAACCGAAAATTTCTCCAGAAAGTTCGATTACGTATCCATCTAAAGGTGACTATTGCCGATCGTTTGCCCCAGATTATATGTAATAAATGCACAATGGTGATTCGAAATTTTTACGTATTCCGGGACAAGTGCCACAAGAATGATACATTTCTGCGAAACCAATTAGATACTTGGGAAATAAAATGTGAAATTAAAATCGAGGGTGAGGCGGAAAATGTATTAGAAGTGCAAATGGAGTGTTTTGAGGAACGTAAAATCATAGAATTTCCTGAAATATACGGTACTAATCCAAAAGAGGAGTTTGAGAAAACTGACAACGAAAATAAAAGTGAAATCGATATATTTGGAGATTGCCCTGGTGATCGAATATACGATGAAAGTTCAAATGATTTTAACGAAAACGATAAAGATTTTGTTTTATCAGAAAATATGAAGTCATATAATAAATATCCAAACACTAGAGGAAAAACCAAACAGAGTAAAACTGATGACGGAGAACAACAAAATATATACCACAAGTATGAAAGCACTCTAGATATTATGAAGCCAACCAAAAAGTCCTCAATCACTAAAGTAAATAGTAAAAAGTCTACTGTTACAGGTGAGGAAAACGCTCCAGAAGATCAAACAAAAATCTTCCACAAATGTGATATTTGTTTCGAAGTGTTCGATAACCGTAAAGAATTGATCATCCATCGTCGGGCCAATCACATTAACGAGATAAGCGAGGATCTCTATACGATTGTGAGAAAGGATAACAAAACCTATTATATCTGCAAAATTTGTAAAAAATTTTGTATACACAAAAATGTATTGCGGGTTCATTTAAGAATGCATACTGGGGAAAAGCCGTACATGTGTCCCGTTTGCTCTCAATGTTTTTCCCAAAAAAGGCAATCCCAAGAATTCCAATCGGAGTTTGCAGTTAAGATTCATTACGACGAGCATCATCCGCCTTCACAAGAAAAAGAACAAATCCGTTTGTTGTCAAAACCTACTGAGTGGCAATTATGTGATATTTGTGGCGAATTTCGAAAAGATATAATGGAACATTTGAGGTGGCATGCTGGTAAAAAGAAGTACGAGTGCAAAATTTGTGGAAAAATTTTATCAACCCCCAGCTCACTATCGCAACGTCGTCAGCGACATGCCGTTGACAATAAATATATTTGTGATACATGCGGCAAAAGTTTTAAAATTCGACATGACCTAACATTTCATCGAAAAGTTCATTTTGAAGAACGTAAACACGAATGTCACATATGCAACCGGAAATTTCTTCAGAAAGTCCGATTACGTATTCATCTCAAGGTACATGCAGGTGAAAAGCCATATCAAATATATGACAACCGTAAAAGGGAAAAGAAACGACAACAGCGAATAGAAATGATGAAAAATGGAAAACCACTTCCAACACCATTGACTCGAAAAGAAAAGGAAATAATGGAAAAATTAGGATCAATATTATATGAGAATCCTACAAATGAAACCCCCTACAAATGA
Protein Sequence: MSAENQCNRICRTCLTQEFSNNTSNSLYTSIDLENGESLEIFKIIENCINLEVRNADRLPQIICNKCTMMIRNFYVFRDKCHKNDTFLRNQLDTWKLKCEIKIEDAVENVLEVQMGSFEESKIIEFPEIYATGPKESFGNTDNENKSEIDIFENCPGDRIYDESSNDFSENDKDFVLSEGRILENMKSFNKYPNTRGKTKQRKTDDGEQQNIYHKYESTVDILKPTKKSSTTRVRTKRFSHDSDGENDQNEQKNIFYKYESTGDIPKPFKMSSKQTKICNAAEKTVENQQNISHKQDSTVTISKPSKKSSTSKIDIKMCIPGPDGVHDREEQLKLFYKCDICFKVFDNRKELIVHRRAKHINEISEDLYTIERKDNKTHFICKICKKSCKQKNVLRVHLRSHTGEKPYMCPVCPLRFAQKSQSQKHMKVHNLETIETKTAMSYKCALCQVEFESELVVKSHYDEHHSPTQEKEKIRLLSKPTEWQLCDICGEFRKDITDHLKWHAGKKKYECKICGKILSTRSSLSQHRQRHAVDKKHVCDTCGKSFKIQHCLTLHRRVHFEERKHECHICNRKFLQKVRLRIHLKVTIADRLPQIICNKCTMVIRNFYVFRDKCHKNDTFLRNQLDTWEIKCEIKIEGEAENVLEVQMECFEERKIIEFPEIYGTNPKEEFEKTDNENKSEIDIFGDCPGDRIYDESSNDFNENDKDFVLSENMKSYNKYPNTRGKTKQSKTDDGEQQNIYHKYESTLDIMKPTKKSSITKVNSKKSTVTGEENAPEDQTKIFHKCDICFEVFDNRKELIIHRRANHINEISEDLYTIVRKDNKTYYICKICKKFCIHKNVLRVHLRMHTGEKPYMCPVCSQCFSQKRQSQEFQSEFAVKIHYDEHHPPSQEKEQIRLLSKPTEWQLCDICGEFRKDIMEHLRWHAGKKKYECKICGKILSTPSSLSQRRQRHAVDNKYICDTCGKSFKIRHDLTFHRKVHFEERKHECHICNRKFLQKVRLRIHLKVHAGEKPYQIYDNRKREKKRQQRIEMMKNGKPLPTPLTRKEKEIMEKLGSILYENPTNETPYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -