Napp055972.1
Basic Information
- Insect
- Nephrotoma appendiculata
- Gene Symbol
- ZNF711
- Assembly
- GCA_947310385.1
- Location
- OX371224.1:365550700-365562068[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 6.1 1.4e+03 2.2 0.5 2 23 8 29 7 29 0.92 2 14 0.0079 1.8 11.3 0.9 1 23 1080 1102 1080 1103 0.96 3 14 0.036 7.9 9.2 0.2 1 23 1219 1241 1219 1241 0.95 4 14 9.9e-07 0.00022 23.6 2.6 2 23 1244 1265 1244 1265 0.97 5 14 0.0066 1.5 11.5 0.8 6 23 1275 1292 1273 1292 0.97 6 14 5.6e-05 0.012 18.1 4.1 3 23 1300 1320 1296 1321 0.95 7 14 0.26 58 6.5 2.3 5 23 1334 1352 1331 1352 0.95 8 14 0.0001 0.023 17.2 3.1 3 23 1359 1380 1359 1380 0.98 9 14 6.7 1.5e+03 2.1 2.6 2 23 1393 1413 1392 1413 0.95 10 14 1.9e-06 0.00042 22.7 1.1 1 20 1419 1438 1419 1441 0.95 11 14 0.00039 0.086 15.4 0.6 1 23 1449 1471 1449 1471 0.99 12 14 9.8e-06 0.0022 20.4 4.2 1 23 1477 1499 1477 1499 0.98 13 14 0.00014 0.031 16.8 3.9 1 23 1505 1527 1505 1527 0.98 14 14 0.0049 1.1 11.9 3.1 1 23 1533 1555 1533 1556 0.95
Sequence Information
- Coding Sequence
- ATGTATGCTCAGCAACAACAACAATGTCCTGTTTGTACGTTATTCCTTCATCTGGGCATGAACCTGGAGTCCCATTTGGAAACCCATCCGAAAGATCAAGTTATCAAAGCATTAGTAGCGAAAATGGTCCAACCAAGTGGTGGCGTATTGATTGATAGTAGTACTGCGATTACAAGGGCATCACAATCACATCCAACGAATCATAATGGACATAATGCCATTTTGTATGGCAATCATGATTCCCATCCAAATTCAGTTGGACCTAACTTAGCAGAATACGGGCCGCCGCAAACTTCACAACCACCAACAGGAACGCAGCCTAATTTTTTAATAGTGAACAGTACGAGCACAAAATTTTTTCGACGAAGCAATGCCGCGATAATAATAAACAATCAACCTCCACCGCCACAATTAACATACCATCAACAAGACCATCATCCACGACATCATCAAACGCATCGCTACAACAATGCGCCAATACAGCCATTTGATGCAGTCTCACCGAAAAGTTTTCATCAGCATAATAAACAAAATTTTAATCAATCATCTAACCATCATCAGCATAATAATGTATTAGATAATTCCATTAATCATAGTAATAGCAATAGAAATAGTTTTGAACACGTAACTAGAACGAGCGATGCAGCTCAATTAGAGTTAGACAATTATGAAAATATACCTCAGAAATATAATGACGATAACGATGATGATTTAGATAACAAGGAGGTAATAGATGGTTCTAGTAATGCTGATTACTATGATCAAGATAATAGGAATAATAGTAACAGTAGTCCCAATGTAAATAATGAATCTGACAGATCAAACGAATGGGATGAAGATGGCAATCAAATCGAAAGCTATACAGGCAACCAAGTTGCCGCTAAATATTTCGAACAGGACAATGGCGATTTTGTCGTACAAGAAAGTCCAAAGTCTTTTGTTGAGTATACAGAACTGGATGAAGGAGATTTCATGGTGACAGAGAAAGTGGTACGCACACCATTGAATATTATTCATTTCGTTGAAGGTGACGAGGAAACTGAGCCAAATAATGAAAATGAAATCGACCAAGACGAAGATTATAATAAAAATGCTGAAGAAAATATAGATCCAGATGATTTCTTATTTTCAGATGTCACCGATAGTAAAAAAACACCCGTTGGTTTAAAAGTGTTGAGTAATGTAAAACTAACGCCAGACATGATTTCATCCGGTATCAAAGAAATTATTAGTAGTGCAAAATCGGTTAATCTGAATGATAGTCAAAACGCTAAAATTACACCAAAAATAGTTGAAGATATTGAGTTGCTCTCGGATGATGAGTACTTAGTTGCTCCATCACCTCGTGCTGTTAATATTGTTCCAAAGAAACCGCCAACCTCACCTCAGGCAAGTTGCTCGAAAAGTATTAGTAATGATACAATGCTGACAACATCCGTGATTCGGATGGCATCCACTACATCCGACACAAAAGTATCCACTTTTAAAGAGCCGCAAACAATTCCATTGCTATTTCATTCAAAAGCTTCTTTTAAAATGGGCTCGATCAAAAAAGAGCCCAAAAAACTGGTCCTAAAATTAAAGAAACCGCTGCCTGATTCAGATGATACCGCTGATAATTCGATAAATTACAATACGATGAATATCAAAACTGAGAAATTGGATAGGTCGCAACAGCCGACGTCGTCAAAGAATTACGAACAAAAGATCAAACTAGAAGTTGATGAATCGAAAGAGTGGATTGATGTAAAAGAAGCTTTGGCTAAAAAGACAAAGTCGAAGAATATTAAACGAAAACCTCGAATTAAGAAACGTCGAAGCGTTAAAAAATTAAGGCTGTTAAAAAAAATGAACAAAGCACCAGTAAACCGTAAAACAAGACATATGAAATTACAAAAGGTAGATTCTCAAAAGCCAGGTCATTCGAAAAACTGTAAAACGACCACGGCCATTAAGCAAAGTGATTTAAATACCAATGAGGATTTAGGGATGGTTACTGAATATGGCAAACTCGCAGTTAGTTTGGAAACGCGTCAGGAAATTGAAAATCGAATTTATGCAAACGATTTACCTAATGCTGAGGGTTATGTTCCGCCTTCGATCGCCGATTTTACAAATAATTTATACAGCGAACTAAATATTGAAGAACCGCAAAAATCTGAACCATCTACTTGTATGCCGATTAATACCACGGTGACTGCCATTCAACCGTATCCGGAAAGTTTGTATCCCGAAGTTAGTCTAAAATTGGATGAAGATGATACTGCTGTTCCAGTTGTTACGAATGAGGTGACTAAATCAGAAACATCAACCTTTGGCACTACTAAAGACGAGGATAGCAAGCACAACATTCCTAATGTAATGAATAACATGCTCGAGGAAGAGCCCAAAATATCTGCGTCATGGACATCAGAAATAACATCTGCTATCGAAACCATTGAATCTCGTTCATGTAGCCATATAATGCCGGAATATACATGCGCTACGACCGAACACTCAATTCAAATTCAAGAGGAAACAAAACACATGGTTTCGGCGGATGCGGTCGACTGGAAACCCAACTCACAAGACAATCCGATGAGTTATGATGATTTAAATAATCAGGCTGGTCCTAGTTCTAGTTATCGGTTTCCGAATTTCTCTATGGGAAATTACGATCCAGATTTTCTTTTTCCTTCGGCATCCACCGATCGTAATAATCGATTTTTAGAGTTTATCGATGACGGTCAGGAGGCCGCAACATGGAAGCATCCATTTAGTCCGCAATATGTGAATTTTGAGAATGATCGAAATTCGTATATGGATTTAGACACGTGCAAGACAACAAATTTGCCATATAATCGGGCACCATCCACCGAGAGTATTAATATTCGGACCGATGAGAAGATGCCGGCAAAAGGAGAAATTTCCGAGCAGGAGAGTAATGGAGAGGTCGATGTTTCATGGAACCATCAAATGTATCAATATTGCCAACAGGAGTCTATACCTAAATATTATAATCCGAATGAACAGTCATCGACTGGTTCAAAGGAACCATGGAAATCGTTTAATGAAAATAATTTTCAACAATTTTCTCAAAATATTCCGAAATTTAATCAAACCTCTGAACCAGTACCAACGTACAGTAACTTGGACCGACCAAAATCGCCTAACGATGTTTACATTATAGAAAAGAAACCCGATGTGAATATAGCCGATGCCTCTGTATCTGGTGCAAAGAAAAGAAAACCGCGATGCTACCGTTGTCCCGAGTGTTATGCGGTATTTGAAAATTTGCGGTTAAAACGTGCTCATATTAAACTACATCATCCCGATTCGCTTTTAACGCCACATAAAGCTCCCACCTTGCCAACTGCAACTACGGTTATAAAAGAGGATAATAATGAAATGGAATCAAAATTATTTTTCTCCTCGATAACGGAAACGGGACTTAATATGTGCACAACATTCGAGTTTAATCGAAATGAGATTAGTGTTACGGCTGAGCCCGCGGTTAAAACCGAAGATGGGATAGAAGTGGGTAAGAAAAAAATTATGGGCTTTGATGAGCTTAAAAATGAATTGTTGCAAACTGGTACACTAGCGACTGGATCGAAACCGGTAGGGACGGTGCCAAAAATCATTAAAATTTTAAAAACGAAAAATAAGAAAGTGTACGTGTGTCAAAAGTGTAACGAAGAGTTCAAAAGTATTCGTGGTTTTGACGCTCATTTAGGAATACATCCGGCAGAGTGCCAACAGTGTGGTAAATCGTTTCGACACTGGTCTAATCTATCAGTGCATCTTAAACGACATCTAGGTATAAAAAATTATGCATGCCGGTGCGGAAAAAAATTTGTATTGAAACAGAATTTAGATGAGCATATGCGGATTCATACGGGGAAGTGTCCAATTTTGTGCACTGATTGCCCACGTAAATTTCGAAGATATTCGAATTTAATTCAGCATCGTAATCGGCATCACTTAAATATTAAACCAGAAGAAAAAGATTATGTGTGTCACTGTGGCGAAGTTTTCCATACAAAAGCGAAATTTAATTGGCACAAAGAAATTCATGATAAGAAACCTAAAGGTTGTCCATATTGTCGCGAACGCTTTATACACAAAAATAGTTTGACGCGCCATATGCGATTGTCGCACTCCGAAAAATATTGGTTTTTCAAAAATCAAGCGGTTGAGTGTCCCATCTGCCACCAATTATATTTGAAAACGAGCATAAAACATCATATCAATAAGCATAATTTTAAGACTGACTACAAGTGTAATATATGTAATAAAGTGTTTAGTACAAAATGGAATCTAAAGCAACATCGGTGGATACATGCATGTCGCTCGACCAAGCCGTACAAATGTAAACTATGCACTTCCGCATTTGTCCGTGAATCCGATTACGTAACACACATGAATATACATAAATCGATTAAACCTTTTACGTGTGACCATTGTGGCCGCCAATTTAGTCGGAAATATAATTGGTTGCGTCATACGCGAGAACATGAAATACCGAAAAAATTTAAGTGTAATATTTGTAATAAACAGTTTCACAGGGCATACTACTTAACGGAACATTCACGGGTTCATACCGGTGAACGCCCATATTCGTGTAACATTTGTGGGAAAACGTCTGCTACCAAAACTAATCACAATAAGCATATAGTGATACATCATGCGCGAGATCCTCTAGCAGCTGAGGGTTAA
- Protein Sequence
- MYAQQQQQCPVCTLFLHLGMNLESHLETHPKDQVIKALVAKMVQPSGGVLIDSSTAITRASQSHPTNHNGHNAILYGNHDSHPNSVGPNLAEYGPPQTSQPPTGTQPNFLIVNSTSTKFFRRSNAAIIINNQPPPPQLTYHQQDHHPRHHQTHRYNNAPIQPFDAVSPKSFHQHNKQNFNQSSNHHQHNNVLDNSINHSNSNRNSFEHVTRTSDAAQLELDNYENIPQKYNDDNDDDLDNKEVIDGSSNADYYDQDNRNNSNSSPNVNNESDRSNEWDEDGNQIESYTGNQVAAKYFEQDNGDFVVQESPKSFVEYTELDEGDFMVTEKVVRTPLNIIHFVEGDEETEPNNENEIDQDEDYNKNAEENIDPDDFLFSDVTDSKKTPVGLKVLSNVKLTPDMISSGIKEIISSAKSVNLNDSQNAKITPKIVEDIELLSDDEYLVAPSPRAVNIVPKKPPTSPQASCSKSISNDTMLTTSVIRMASTTSDTKVSTFKEPQTIPLLFHSKASFKMGSIKKEPKKLVLKLKKPLPDSDDTADNSINYNTMNIKTEKLDRSQQPTSSKNYEQKIKLEVDESKEWIDVKEALAKKTKSKNIKRKPRIKKRRSVKKLRLLKKMNKAPVNRKTRHMKLQKVDSQKPGHSKNCKTTTAIKQSDLNTNEDLGMVTEYGKLAVSLETRQEIENRIYANDLPNAEGYVPPSIADFTNNLYSELNIEEPQKSEPSTCMPINTTVTAIQPYPESLYPEVSLKLDEDDTAVPVVTNEVTKSETSTFGTTKDEDSKHNIPNVMNNMLEEEPKISASWTSEITSAIETIESRSCSHIMPEYTCATTEHSIQIQEETKHMVSADAVDWKPNSQDNPMSYDDLNNQAGPSSSYRFPNFSMGNYDPDFLFPSASTDRNNRFLEFIDDGQEAATWKHPFSPQYVNFENDRNSYMDLDTCKTTNLPYNRAPSTESINIRTDEKMPAKGEISEQESNGEVDVSWNHQMYQYCQQESIPKYYNPNEQSSTGSKEPWKSFNENNFQQFSQNIPKFNQTSEPVPTYSNLDRPKSPNDVYIIEKKPDVNIADASVSGAKKRKPRCYRCPECYAVFENLRLKRAHIKLHHPDSLLTPHKAPTLPTATTVIKEDNNEMESKLFFSSITETGLNMCTTFEFNRNEISVTAEPAVKTEDGIEVGKKKIMGFDELKNELLQTGTLATGSKPVGTVPKIIKILKTKNKKVYVCQKCNEEFKSIRGFDAHLGIHPAECQQCGKSFRHWSNLSVHLKRHLGIKNYACRCGKKFVLKQNLDEHMRIHTGKCPILCTDCPRKFRRYSNLIQHRNRHHLNIKPEEKDYVCHCGEVFHTKAKFNWHKEIHDKKPKGCPYCRERFIHKNSLTRHMRLSHSEKYWFFKNQAVECPICHQLYLKTSIKHHINKHNFKTDYKCNICNKVFSTKWNLKQHRWIHACRSTKPYKCKLCTSAFVRESDYVTHMNIHKSIKPFTCDHCGRQFSRKYNWLRHTREHEIPKKFKCNICNKQFHRAYYLTEHSRVHTGERPYSCNICGKTSATKTNHNKHIVIHHARDPLAAEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01053718;
- 90% Identity
- iTF_01054640;
- 80% Identity
- -