Napp004471.1
Basic Information
- Insect
- Nephrotoma appendiculata
- Gene Symbol
- kn
- Assembly
- GCA_947310385.1
- Location
- OX371223.1:73716921-73719317[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-94 5.2e-90 304.6 0.1 249 385 25 161 18 164 0.98 2 2 6e-09 0.00024 21.7 12.9 422 503 164 248 161 277 0.71
Sequence Information
- Coding Sequence
- ATGGATGTAAGAATCCCAATCCAGCACTACAACCTAAATGTGACCATGACTGGTCTCTATCCACCACTGCCAATAGCCCAGCCGTGTATTAAAGCAATATCGCCCAGTGAAGGTTGGACAACTGGCGGTGCCCAAGTAATAATTGTCGGTGATAATTTTTTCGATGGACTGCAAGTGGTATTCGGTACGATGCTAGTGTGGAGCGAACTAATAACATCGCATGCGATTCGGGTACAAACACCACCACGCCATATACCCGGAGTCGTTGAAGTTACATTATCGTATAAAAGTAAACAATTTTGTAAAGGTTCACCGGGACGTTTTGTATATGTTTCGCTTACTGAACCAACAATAGACTACGGGTTCCAAAGGTTACAAAAACTGATACCACGACATCCTGGTGATCCAGAAAAATTACCTAAGGAGATTATTTTAAAGCGGGCTGCTGATTTAGCTGAAGCTCTTTATTCAATGCCACGGTCGCCAGGCGGTTCGACTGGGTTTAATTCGTACAGTGGGCAGTTAGCGGTTAGTGTGCAAGATGGCGGTGGACAATGGGGTGAAGATGATTATCAACGAGCACAAAGTAGTAGTGTTAGTCCACGTGGTGGATATTGTAGTAGTGCGTCGACACCTCATTCGTCCGGTGGTGGATCATATGGTGGTGGTGGTAATGGTTATGGGCCAGCCCCGAATATGGGTGCCCTATCATCGTCGCCGGCTAGTGTTTTTAATTCGACCTCAAGAGGACTTGTGAATGGTTTTAATCCATTTACATTGCCAACATGCAGTACTCAAGGATATACATCAAGTCCTCTAGTCACATCATCAAAATAA
- Protein Sequence
- MDVRIPIQHYNLNVTMTGLYPPLPIAQPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYSGQLAVSVQDGGGQWGEDDYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGGNGYGPAPNMGALSSSPASVFNSTSRGLVNGFNPFTLPTCSTQGYTSSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_01163736;
- 80% Identity
- -