Nscu001225.1
Basic Information
- Insect
- Nephrocerus scutellatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_947095585.1
- Location
- OX352765.1:25489422-25492730[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2 4.1e+04 -8.1 6.4 15 19 181 185 180 185 0.82 2 22 0.15 3.2e+03 -0.6 0.8 4 10 216 222 215 222 0.95 3 22 3.1e-08 0.00064 20.8 17.0 1 19 230 247 230 247 0.99 4 22 0.77 1.6e+04 -2.8 1.8 5 10 272 277 272 277 0.95 5 22 1.3e-06 0.027 15.6 14.4 1 19 283 302 283 302 0.92 6 22 1.4 2.9e+04 -3.6 1.8 6 10 327 331 326 331 0.89 7 22 1e-08 0.0002 22.4 14.5 1 19 337 355 337 355 0.99 8 22 0.98 2e+04 -3.1 0.6 5 7 383 385 379 387 0.49 9 22 7.5e-06 0.15 13.2 7.4 1 18 390 407 390 408 0.95 10 22 0.73 1.5e+04 -2.7 0.4 1 5 417 421 417 426 0.73 11 22 2 4.1e+04 -5.0 2.3 5 10 431 436 431 436 0.91 12 22 2.4e-07 0.0048 18.0 17.6 1 18 442 459 442 460 0.98 13 22 2.6e-08 0.00053 21.1 12.9 3 18 471 486 463 487 0.85 14 22 1.6 3.3e+04 -3.8 0.5 9 12 524 527 523 529 0.72 15 22 0.0049 1e+02 4.2 5.8 10 19 533 542 530 542 0.91 16 22 0.064 1.3e+03 0.7 4.2 3 11 555 563 545 564 0.86 17 22 2 4.1e+04 -4.4 1.4 6 10 624 628 623 628 0.58 18 22 5.8e-06 0.12 13.6 5.6 1 12 634 645 634 645 0.97 19 22 2 4.1e+04 -6.9 4.4 1 7 658 662 658 665 0.49 20 22 0.34 6.9e+03 -1.6 17.6 4 19 675 690 673 690 0.92 21 22 1.8 3.6e+04 -3.9 1.6 8 13 695 700 694 700 0.74 22 22 7.4e-08 0.0015 19.6 11.3 1 17 739 757 739 759 0.86
Sequence Information
- Coding Sequence
- ATGCCGGCCGGAAGCAATCCATGGAAAACAAACAATGCCGCACAAAAATCAAGTTCTGGAAGTTCATGCAAAAAGCCGCAAAGCCAGCAGCAACAACAGTCTAAAGCCGAATCAAAGTTACAAGCTCAAAATAAATTTGAAGAAATTCAATCTAGAAATATTAAAATTGCAAAGAAAATAACTGATAACTATGAGTCAAGCTCGGACGAAGAAGAAATAGACGGCGCGGTAATTATAGAGAAACTCTACCAAAATTATAAGGGCGGCAATGATCAACTACTGGCTAAAACCTCAAGCTTTCTAGAAAATGTATTGCAATCTGGCTCAGCTATTTGCCTTATATGCATAGGCACTGTCAAGAGACCAGATTCGATATGGTCCTGTAAATATTGCTTTTGCTTTTTTCACTTGCTATGTATCAAGCGTTGGGCAAACGATAGTATTGCATTGCTTAAAAATCAGGCAAACGAACAGGAACAAGGCTACTTCAATAACTTGGGTGAATACGTTCCTAAAAAGCTGAAGATAATAAAGTGGTGTTGTCCACAATGCAGGCGTGACTTCACTCCAGCAGATCGACCGACCCAATATGAATGTTTTTGTGGCAAAGAAGTTAATCCAACGAATCAACCATGGTTGGTGCCTCACTCGTGCGGTGAAACTTGTGGCAAAAATCTTCAACCAGAATGTGGACATAAATGCTTGTTGCTTTGTCATCCAGGACCCTGCCCACCATGTCCCCAGATTATTATTACTAGTTGCAAATGTAATAAGTCGCAGACCAAACCTCTACGATGTTTTCAAAAAACTTGGACGTGCGAGTCCAAGTGCTCGAAAATGCTAGCATGTCAAAAGCATAAGTGCAATCAGGTTTGCCATGAATCTGGTAAATGTCCACCATGCAGCAAGACGAGTGTCCAGAAGTGCATATGTAGAAGCGAAGAAGCACTACGCAGTTGCTCTCAACTTATTTGGCAATGCAAAAAGGTTTGCAATTTAAAATACTCATGTGGCTTACATAGCTGTAAAAAAGTCTGCCACTCCGGTCCATGTGGCGACTGCCCACTTGGACTCCCTCGGTCATGCCCATGCGGGAAAACTAGCAAAATCGCACCATGCAATGAGCTTATTGACACTTGCGGCGATACTTGTCAGAAGCCGCTATCATGTGGGTTGCACTACTGCACGCAGCGTTGCCACAAAGCCGAGTGCAGTTTGTGCCTTATCATAACAAACAAGAAATGCCGTTGTGGCTTGCACGAAAAGGAATTGCCTTGTTGGAAATCTTTTACATGTGAAACAAAATGCAAGCAAATGAAAGAATGCGGAAAACATTCATGCAACAAAAAATGTTGTGATGGGCAATGTCCTCCATGCGATAAGGTATGCGGTAAAGTTTTATCATGTAAAAAGCACAAATGCAAATCGGTATGTCATGATGGGCCATGCTATCCATGTGATTTAAAATCGCAAATCAATTGCCGCTGTGGCAGTACATCAATTTCTGTTCCTTGTGGCCGTGAACGCAGAGCACGCCCAACTTGCATGCTACCTTGTCGAATTCCATCAAAGTGCCACCATCAAAATCGACATCGTTGCCATAAAAACGAATGTCCTCCCTGCACTCAAAAATGTGGACTGCCAAATGGCAGCAAAGGATGTGTGCACATTTGTGAAGCAAGATGTCATGCAGCTGTAAAAGTTCCTATACGCAGTGCAAAATCAGGAACCAGCATTTGGGATTACAATTTAGAAAAGTTTGAAATAAAATCTTTGCCACATCCACAATGTGAAAAGAAAGTAATGGTCACTTGTATTGGTGGACATGAAAACGCCGAGTGGCCCTGTTGGAATTCTAAACCATCATCCTGCCACAGACCATGTGGTCGATTGATGCCATGTGGCAACCACAAATGTCCTTTACCTTGTCACTCGGTGCCTGATATAACTGATCAAAAGTCGCAACCAGGTTGTGGATCGTGCACAGAAGGCTGCTTAATTCCGAGGCCATCTGGTTGTGTTCATCCATGTTTGAGACCTTGTCATTTACCACCATGTCATCCGTGTACTGTTAATATCAAATCAAAGTGTCACTGCGGACTTTCGTTTATTTACTACAAATGCACGGAATATGCAAATGGAACTCCTGAAGAAATTGATGAGCGAATCAATTTACTTAAAACCTGCGGCACTCGTTGCATAAAAAATTACACTTGTGGACATCGGTGTTCGTCAATATGTCACTCTGGTCCATGTCCAAATTCAGAGAATTGCCGCAAGAAGATGCGAATATATTGTCAATGCCGAATTTTAAAAGCTGACGTATCTTGTGAGAAATTCCGCTCAGGATTCGTTTTACTTCCGTGCGACTACAGTTGCATGCTCAAAAAGGAAGCAAACGAAAAGTTGAAATTGGAACAAGAGGAGAATGAAAAACGCCTTGAAGAGGAACGAAATCGCGCCGAACTCGAACAGTTCGAGAAGAAATTTGCAAAGAAAAAGTACAAAGAGCGAAAGATTATCACCGAAGAAGTCAAAAGTAACCGAAATTGGAAGTTGATTTTAATACTAGGCGCGACAGCTGTAGCTATCATCACTGCTGTGGCAGTTGCATTGCACGATGGAGGAAATACTCGTATATAA
- Protein Sequence
- MPAGSNPWKTNNAAQKSSSGSSCKKPQSQQQQQSKAESKLQAQNKFEEIQSRNIKIAKKITDNYESSSDEEEIDGAVIIEKLYQNYKGGNDQLLAKTSSFLENVLQSGSAICLICIGTVKRPDSIWSCKYCFCFFHLLCIKRWANDSIALLKNQANEQEQGYFNNLGEYVPKKLKIIKWCCPQCRRDFTPADRPTQYECFCGKEVNPTNQPWLVPHSCGETCGKNLQPECGHKCLLLCHPGPCPPCPQIIITSCKCNKSQTKPLRCFQKTWTCESKCSKMLACQKHKCNQVCHESGKCPPCSKTSVQKCICRSEEALRSCSQLIWQCKKVCNLKYSCGLHSCKKVCHSGPCGDCPLGLPRSCPCGKTSKIAPCNELIDTCGDTCQKPLSCGLHYCTQRCHKAECSLCLIITNKKCRCGLHEKELPCWKSFTCETKCKQMKECGKHSCNKKCCDGQCPPCDKVCGKVLSCKKHKCKSVCHDGPCYPCDLKSQINCRCGSTSISVPCGRERRARPTCMLPCRIPSKCHHQNRHRCHKNECPPCTQKCGLPNGSKGCVHICEARCHAAVKVPIRSAKSGTSIWDYNLEKFEIKSLPHPQCEKKVMVTCIGGHENAEWPCWNSKPSSCHRPCGRLMPCGNHKCPLPCHSVPDITDQKSQPGCGSCTEGCLIPRPSGCVHPCLRPCHLPPCHPCTVNIKSKCHCGLSFIYYKCTEYANGTPEEIDERINLLKTCGTRCIKNYTCGHRCSSICHSGPCPNSENCRKKMRIYCQCRILKADVSCEKFRSGFVLLPCDYSCMLKKEANEKLKLEQEENEKRLEEERNRAELEQFEKKFAKKKYKERKIITEEVKSNRNWKLILILGATAVAIITAVAVALHDGGNTRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -