Basic Information

Insect: Nephrocerus scutellatus
Gene Symbol: -
Assembly: GCA_947095585.1
Location: OX352762.1:111307590-111321237[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00028 0.047 15.3 1.4 1 23 933 955 933 955 0.98

2 8 0.00025 0.041 15.5 1.3 1 23 987 1009 987 1009 0.97

3 8 0.31 51 5.7 1.2 1 20 1018 1037 1018 1042 0.88

4 8 0.006 0.98 11.1 0.0 3 23 1049 1070 1048 1070 0.96

5 8 0.00017 0.028 16.0 1.7 1 23 1076 1098 1076 1098 0.97

6 8 0.044 7.3 8.4 0.2 1 23 1105 1128 1105 1128 0.95

7 8 0.0022 0.36 12.5 2.4 2 20 1135 1153 1134 1156 0.91

8 8 0.14 24 6.8 8.2 1 23 1162 1185 1162 1185 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00028	0.047	15.3	1.4	1	23	933	955	933	955	0.98
2	8	0.00025	0.041	15.5	1.3	1	23	987	1009	987	1009	0.97
3	8	0.31	51	5.7	1.2	1	20	1018	1037	1018	1042	0.88
4	8	0.006	0.98	11.1	0.0	3	23	1049	1070	1048	1070	0.96
5	8	0.00017	0.028	16.0	1.7	1	23	1076	1098	1076	1098	0.97
6	8	0.044	7.3	8.4	0.2	1	23	1105	1128	1105	1128	0.95
7	8	0.0022	0.36	12.5	2.4	2	20	1135	1153	1134	1156	0.91
8	8	0.14	24	6.8	8.2	1	23	1162	1185	1162	1185	0.96

Sequence Information

Coding Sequence: ATGGAGTTTTTTATCTCCCGACCTTCACTCACCATAATGATAGCTATAGCTGAGGTTGATCAAACTATAGTTTTACTTGACAAATTCAGTGATCCATCGCAGTGCGATGCAATCCAATACTTGTTGACAACCTTAAGACGTAAATTTCCAAAAGCATGTGAGCAAGTGACAAGGAATTTCCTAATTTCCGATGAAGTAACTAAGTCATCGAAAAAGCTGTTAGTTGCCAAAAAGGAAGAAATTAAAACCGAAGAAAATAGCACCCATTCGGAGGGCTCAACTGACTTGAATCAGAATTTTGAAAAAATCCTATGCAAGGAGGAATTTATGTGCATTGACGAAGAGGAGGGTGACTCGGAGGACGACGACGACGACAACGACGAGGAGGACGGTGATAACTTCCATCGACATGGAGAGAATGCCACGGACGCAACAACAGCTGCTACTGTGTATACTCGACGATCATCTGGCCGTGATAGTGGATTGTCCAGTTCAACGTCCGTTGCCGCAAAGCGAATGCGATACATGACCTGCGAAGATAACACTGATGATGAGGTTCATGCATTGCAAAGACGTGACCCACTCGATTTAATTCCATCGTCAATTATTGACACGCGCAAAAAACTTTTGATTGCCAAAAGTAACAGACTGGGTGGCTGCGGCGACAACCACGAAAACGACAACAGTGAAGATCTTCAGATTTTGCATCAACATTATCGCAGTAGCCGTCATGGCCATAATAATATTTTGAGTGAGAAATTAACATTTAGCAACAGCAGTAGTAGTAGTAGTAGTAAAGCGACGACGACGGCGGCATCTAAGCGATGCGATCGTTTAGAACGAGCCCGACAAGACAACCGCCATCATTCAACGTCACTCTCAAGCCTACGCACCAAGGTAGTGTCCTCGCTGGGCGAAGGTTATGTATTTTATCCAGATACTGAGCTGACTGTTTACTATCACCACAGCTCGGGTGAATTAAGTATTAGATCGTATAAGGAGCAATTTCGTTTAAGATTGAAAGCTGCTTTAAATTATCACCATAAGCCTTTTTTGAAAGAATTCTACAAGAATTTTATTGTGACTGGAACGTTGGTGGGTACAAGACCGCCGCCGCATATGCTTGAAGCGATTAGATCAAAACGAGACGAAGAAGATCAACTCAAGCGAAGAGAGAAAATCACAAAATCACCTCCTCTGATGTTGATTGATGCCGTGACAGCGGCGACAAAGAGTGAGTTCGATTCGGATCAGGAGTCTGAACCTGATTCCGAAACGGAAATAATGAAATTTGAAGAGATCATTGACGAGGGTGGTGATGGCCGTCTAATTGATGGAATGGAAATGGAGCCAGAAATTGAAGATGTTGGCATCGACATGGCAATTGGAATTGGCAGGGAGAGTGGGGGTATTACAACAACACAAACACACGAACAAATAACTTATATGAATAGCAATCATCATCATCATCATCATCATAATCATCAACAGCAACTGACACAGCAGCAGATATTAGCGGAAACGTCGCACCCGCATCCACATCTCAATAATAGCAGTTTGATGAATAGCAATGTAAATGGGCTATTGGCCAACTCTAACCTTCAATTGGCACAGACAGCAAGTGAAAAGGAATTTCATTCAGCTAATAACATCGGCTCTCAGCTTCATCTTCATCATCATCCACATGCTCATCATCAACAACAGCACCAACCGCCCCCGCCGTTGCATCCGCAGCAGCAGCACAATGATGTGCGTGATGTGCCGTCGCTGGTCGCTCCTGTCCACCTTGCTCACCACCAACAACAGCAGCACCATCATGGTCTTACATCATCATCCATCATGTATCCGTTGCATCAACAGCAACACCAGTTGCAGCTTGAAGATACAAGTCAAACAACCGATAGCTCTGAAGATGCTAATTGCAGTAATTTAATTGCTGCAAACACAAATTTAAATATAACTACTAGCAATAATAGTAACAACAGCATTAATATACAACAACAAAACCAGCTCCCTCAACACCCCCAACACCCTCAACGTCCACAACACCCACAACACCCACAACATACACAACAGCAACAGCAACATCCACACCAATCCCAGCAGCAGCAGCAGCAGCTACACCAGGAGCACACACATCATCACACCCAGCAACACCACCATCCGTACGTTCCACATCCTACTCTTAATCCTGATGTTGTAGCTCCCATTGGGCCAACAGGCAATGCCAGCGCTTCTCTTGCTATGATGGCTTCAATGATGGAAAATCCGCAGCAGCAGCAACCACCACCACGGCCACCGCCACAGCAACAGCACCACTCTGTCGGTTCGATATTAAACACTATTGATGATGAACTTGATAGGAGCAGCACTGCTACTGTGGGAcaacaacatcatcatcatcatcaaatgcagctgcattcagcagcagcagtagctgcacatcagcagcaacgtggccagcaccaaccagcccagcatccacaacagccgcaacTTTTGCCCCGCGTGCATAGCCATCCCCTAGCTGGGGCTGTTGCTGTTGCTGCACTAGATCTGGATGATCAGGAGTTATCTCATGACGATGACGATGACGAGCATGACATTGATAACGACCTCGATGACATAGAGCCGAAACATCAATTGCAAGCGATCTGCAACGATGGTGGCAGTAGTAGTAGCACTTCGCTACAAGCGGCTCCGGCACAAATTGGTGGTAGTGGTGGTGGTGGCGGTGGAGCGAACACAAGTAACAGTAGCACATCTACGACGGCCAGCAAGAAGGCTAAACCTAGTTACAACTGTCTGATTTGTCCAAAGTCCTACCGTAAAAGGAAGTCGCTGCTAGATCACTACAAGATTCATCCAGGATTTTGCCACGATTGCGGTCAACCCAATGGAACCACGTTAGAGGAAGTCATTCAACACAATCGTACTGTCCATACCAAGGAGTTTCCATTTGTATGTGAGACATGCGGCGAATCGTACTCACGTCGGCAGCAGTTTCACGCGCACGTCGAATCTCACAACAAGAAAGAATTTAAAACATCGTATGCTTGCGTTGAATGCGGCCAAAAGTTTCCGCACAAAAAGCTACACCAGCAACATTTGGAAGACTCTGGTCACAAGGCGGACGGTGCTATTTGTGAGGTCTGCGGCGCTGACTTCCCATCAAAGAACGCTTTGTACCAGCACATAATACGCGTTCACAAAAAGGACAATTTCTTCGAATGTCACATTTGTCAGAATCGTTTCACGTTGAAAGCAAATCTCGAACGGCATGTTCAGTTGCACACCGAAATCAAAAGAACGTACGTGTGCGATTTGTGCGGTTCTTCGTATTTTACATATCCCGCGCTGAAGGATCACTACAGCAATGCGCACACCGATGCCTCCGAATGCAAGTGCACTCTATGTGGAAAGCGGTTTGGTTCGGTGAAATCCTTGCAGCGACATTTACCATCGCACTCGGAGGAGCGCGCGCACAGCTGTTGTTACTGCGATCAGACATTCAAGTGGAAAACTCACTTGGTGAGGCACAAACAGACGGTACACACTAATCAGTCATCGCCTAGGAAGGTTAAACGATTCACAAAATGCGAAGATGAGTTAAATCCGTTAGAAGCTTCCGGACCACCGCCGGCGAAAATAACGAAAAAATCCAGTTCGAACAAACCAAAGCAGCAGCAACAGCAGCCGCAGCAGCCGAAAGGAATTATGGTAACCAATACGCCGTCATCAACGCCTACAAGTACAATACAGCAATCATCACAAGAACAACAGCAATTGCTACAGCAGCAACAATTCAATGCTGCAAATAGCAACAACAATTCCCAATCATCCACTTCGACATCACATTCATTACCGACAAACGAATCTCAACAGAATTCCATATACAGTCAAAGCTTTAATGCAGAGAATCTGCTTGGAcaacagtgcaatcaaacccagccacaacaacaacaacaacagcagcagcagcagcagcagcagcagcaacaacaacagcaacagcaacatcagcagcggccaacgcctccgccagcacaacaacaacaattacaccatcgccagacaccgaatgcgcccgacaacaatctaattgtacgtttgaatagctttaatagcggtggaagtgctggtggtggtggtggtggcggtgcagctggtgcaagtgctgaaacacaatttcactttgatcaaagcgctgcgggtgcttatcaacagcaccagctcatcaatcagtatcagcagcaacatcatcatcagcaacagcaacagcagcagcacttgcgcagtcatacaccacaaagccctcaccagcatcaattgcagcagcacttcacttccccacaccatatgccgccacatcatcaccagcagccaacgccgcagcaacttcatcaccatcatcatcaccaacaaatgttgcaccaacaacagcagcagcagcagcagcaccatcactcgtcaccatctgctcatcggcacaatcagcagcgttcgccgcatcatcatcaccagacggcggcaagtcagttgcaacaacagcaccagcagccgtcacattcaccacaacatccaccactccagtcgccacagccgcaggcgcacacgccgcaaccagcaccatcacaacaacaacaacaacaacaacagtcggcatcacatcaccaacagcaacagtacccatgtgcctcaatacaacaacaacagcaacaacagcagcAGCAGCCCAATCCAAACGATTGGGGTAGCTTAAGCTACAGCAATGCAGCAACCACAGCAGCTGCAAGAACTACTCCCACCAACCAGGCAGCTGCTGGTGCAACTGTAGCCGCTGGCGGTCCCACCTCCACAGGAGGTAGCGGCAACAGTGCCAGCGATGTCAAAGACAATAGTAAATTTTATTCAGTAATAAACGTCGGTTCCACAGATTTTCTGGGTCTTCCATTGAATGTTGCTGGTGGTAGTGGCTCCGCTGCTTCATCTGTGGCCCAACAGCAACAGCCAGCAGCAGTTGGGTCTAAGCAACAAGAAGTTCTTAGCGCCGACATAATGAACTTTCAGAACATGTGGCCTCAAAATCCGCCACCACCGCCGCAGATGGCCTTCAGTACTAATCCCcagcaacagcaacaacaacagcagcagcagcaacaacaacaacaacaacccaatcctaatcagcagCCTCAGGCTAGCGCTGGTGGCCCCACATCAGCAACAGATCCTCAAAACTACAACAACATTGGAAGTATTCTGACAAATCTCAATATCATCGACAACACAAATCCCATGGAATACAACTTCGAATTGTTGCCACCGCCTCCGCCGCCGCCTACCCAACATCAACAACAACAACAGCAACAACAACAAAATACTCTCAATCCACATCAACAGCAGGCAGCTGCTGCTCAGCAGCAGTCGGTTGCGTCGGCTGCTGCTGCGGCAGCAGCTCAACACCACCACGCCGCCGCAGCAGCAGCTGCCTACGGCTTGCAAGCGACTCCAGGCGCAGCGGGACTTCTGCGTCACACAGCCTATGCTGCGGCAGGATCCTCCCCTTACGATCCGCACACCCTAACAGACATATCCGAGCAGAAAAATAGTTTTCAACCGTATCACCCGCATCCACATGTCCCACATGGGGCACATTCCCATCCACACGGTCATCCACTGGTGCATCCTCATGCACCACACCCACATGTACCGCATCCACATGTCCCACACCATCAGCAGCATCATCAATCGGCGGTGTCCGCTGTAACACCACCAGTAAGTGGTTACGATCGGGCGGGCTATCCAATTGTCGTTCCTGGAGACGAAACAAAAACTGTGCTGCCCCCCATCAGCGATTACATGCATCACGCAAGCATGCAGCAGCAACAACAACAGTCGTCACAAGACCTTGTCTACTATCCGGTGAAGAACGATTGA
Protein Sequence: MEFFISRPSLTIMIAIAEVDQTIVLLDKFSDPSQCDAIQYLLTTLRRKFPKACEQVTRNFLISDEVTKSSKKLLVAKKEEIKTEENSTHSEGSTDLNQNFEKILCKEEFMCIDEEEGDSEDDDDDNDEEDGDNFHRHGENATDATTAATVYTRRSSGRDSGLSSSTSVAAKRMRYMTCEDNTDDEVHALQRRDPLDLIPSSIIDTRKKLLIAKSNRLGGCGDNHENDNSEDLQILHQHYRSSRHGHNNILSEKLTFSNSSSSSSSKATTTAASKRCDRLERARQDNRHHSTSLSSLRTKVVSSLGEGYVFYPDTELTVYYHHSSGELSIRSYKEQFRLRLKAALNYHHKPFLKEFYKNFIVTGTLVGTRPPPHMLEAIRSKRDEEDQLKRREKITKSPPLMLIDAVTAATKSEFDSDQESEPDSETEIMKFEEIIDEGGDGRLIDGMEMEPEIEDVGIDMAIGIGRESGGITTTQTHEQITYMNSNHHHHHHHNHQQQLTQQQILAETSHPHPHLNNSSLMNSNVNGLLANSNLQLAQTASEKEFHSANNIGSQLHLHHHPHAHHQQQHQPPPPLHPQQQHNDVRDVPSLVAPVHLAHHQQQQHHHGLTSSSIMYPLHQQQHQLQLEDTSQTTDSSEDANCSNLIAANTNLNITTSNNSNNSINIQQQNQLPQHPQHPQRPQHPQHPQHTQQQQQHPHQSQQQQQQLHQEHTHHHTQQHHHPYVPHPTLNPDVVAPIGPTGNASASLAMMASMMENPQQQQPPPRPPPQQQHHSVGSILNTIDDELDRSSTATVGQQHHHHHQMQLHSAAAVAAHQQQRGQHQPAQHPQQPQLLPRVHSHPLAGAVAVAALDLDDQELSHDDDDDEHDIDNDLDDIEPKHQLQAICNDGGSSSSTSLQAAPAQIGGSGGGGGGANTSNSSTSTTASKKAKPSYNCLICPKSYRKRKSLLDHYKIHPGFCHDCGQPNGTTLEEVIQHNRTVHTKEFPFVCETCGESYSRRQQFHAHVESHNKKEFKTSYACVECGQKFPHKKLHQQHLEDSGHKADGAICEVCGADFPSKNALYQHIIRVHKKDNFFECHICQNRFTLKANLERHVQLHTEIKRTYVCDLCGSSYFTYPALKDHYSNAHTDASECKCTLCGKRFGSVKSLQRHLPSHSEERAHSCCYCDQTFKWKTHLVRHKQTVHTNQSSPRKVKRFTKCEDELNPLEASGPPPAKITKKSSSNKPKQQQQQPQQPKGIMVTNTPSSTPTSTIQQSSQEQQQLLQQQQFNAANSNNNSQSSTSTSHSLPTNESQQNSIYSQSFNAENLLGQQCNQTQPQQQQQQQQQQQQQQQQQQQQQHQQRPTPPPAQQQQLHHRQTPNAPDNNLIVRLNSFNSGGSAGGGGGGGAAGASAETQFHFDQSAAGAYQQHQLINQYQQQHHHQQQQQQQHLRSHTPQSPHQHQLQQHFTSPHHMPPHHHQQPTPQQLHHHHHHQQMLHQQQQQQQQHHHSSPSAHRHNQQRSPHHHHQTAASQLQQQHQQPSHSPQHPPLQSPQPQAHTPQPAPSQQQQQQQQSASHHQQQQYPCASIQQQQQQQQQQPNPNDWGSLSYSNAATTAAARTTPTNQAAAGATVAAGGPTSTGGSGNSASDVKDNSKFYSVINVGSTDFLGLPLNVAGGSGSAASSVAQQQQPAAVGSKQQEVLSADIMNFQNMWPQNPPPPPQMAFSTNPQQQQQQQQQQQQQQQQPNPNQQPQASAGGPTSATDPQNYNNIGSILTNLNIIDNTNPMEYNFELLPPPPPPPTQHQQQQQQQQQNTLNPHQQQAAAAQQQSVASAAAAAAAQHHHAAAAAAAYGLQATPGAAGLLRHTAYAAAGSSPYDPHTLTDISEQKNSFQPYHPHPHVPHGAHSHPHGHPLVHPHAPHPHVPHPHVPHHQQHHQSAVSAVTPPVSGYDRAGYPIVVPGDETKTVLPPISDYMHHASMQQQQQQSSQDLVYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -