Basic Information

Insect: Nephrocerus scutellatus
Gene Symbol: -
Assembly: GCA_947095585.1
Location: OX352761.1:136859207-136866895[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.19 31 6.4 2.3 1 23 1523 1546 1523 1546 0.97

2 13 2.2 3.6e+02 3.1 1.8 1 23 1704 1726 1704 1726 0.94

3 13 5.2e-05 0.0086 17.6 2.8 2 23 1729 1750 1729 1750 0.97

4 13 6.4e-05 0.01 17.4 0.2 3 23 1758 1778 1756 1778 0.98

5 13 2.1e-06 0.00035 22.0 4.7 2 23 1785 1806 1784 1806 0.97

6 13 6.4 1.1e+03 1.6 0.6 5 23 1819 1837 1818 1837 0.96

7 13 7.8 1.3e+03 1.3 7.7 3 23 1844 1865 1842 1865 0.93

8 13 0.014 2.2 10.0 0.1 2 23 1876 1896 1875 1896 0.96

9 13 0.00023 0.038 15.6 0.9 1 19 1902 1920 1902 1921 0.94

10 13 5.8e-05 0.0095 17.5 1.4 1 23 1932 1954 1932 1954 0.98

11 13 0.00011 0.018 16.6 7.6 1 23 1960 1982 1960 1983 0.96

12 13 0.001 0.16 13.6 6.5 1 23 1988 2010 1988 2010 0.98

13 13 0.0018 0.29 12.8 6.0 1 23 2016 2038 2016 2039 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.19	31	6.4	2.3	1	23	1523	1546	1523	1546	0.97
2	13	2.2	3.6e+02	3.1	1.8	1	23	1704	1726	1704	1726	0.94
3	13	5.2e-05	0.0086	17.6	2.8	2	23	1729	1750	1729	1750	0.97
4	13	6.4e-05	0.01	17.4	0.2	3	23	1758	1778	1756	1778	0.98
5	13	2.1e-06	0.00035	22.0	4.7	2	23	1785	1806	1784	1806	0.97
6	13	6.4	1.1e+03	1.6	0.6	5	23	1819	1837	1818	1837	0.96
7	13	7.8	1.3e+03	1.3	7.7	3	23	1844	1865	1842	1865	0.93
8	13	0.014	2.2	10.0	0.1	2	23	1876	1896	1875	1896	0.96
9	13	0.00023	0.038	15.6	0.9	1	19	1902	1920	1902	1921	0.94
10	13	5.8e-05	0.0095	17.5	1.4	1	23	1932	1954	1932	1954	0.98
11	13	0.00011	0.018	16.6	7.6	1	23	1960	1982	1960	1983	0.96
12	13	0.001	0.16	13.6	6.5	1	23	1988	2010	1988	2010	0.98
13	13	0.0018	0.29	12.8	6.0	1	23	2016	2038	2016	2039	0.96

Sequence Information

Coding Sequence: ATGGCAGAAAATGTCCAATGTCCCGTGTGCACACTGTATTTGCACGCGGGAATGAGCCTATTCGACCATTTGGAGACCCACCCCAAGGAGCAAGTGATTAAGGCTTTAGTACATATGACTGTTTGTGGTGGTGCTGCAAGTGTAGGTGCAGGATTGTCCCCTGGATTTTGCGTAAAAACAAAGCCTGCAACTTTGCAAACCAGTGAGTTACAAAAAGAAGAAAAGTCCACTACTGCCACATCAGGGCCAGCGCCAGTCTCGTCGTCACCGTCATCGTTAGCAACAATAACCGGAGAAACACCTACAGCATCTCTTACACATCCAGTGAAACCGACTAAAAAGCAATTGGAAAACTTCTCTTCAAGTTGTGATTCTTCGCTGAGTGCAGCAGAAGAAAAAGAATTCAAGAAAAATGAACAGTTGTCAACTTTGGACCCTAAGCAACCAATTTTTGATGATGACACTGCACAGACGCATACAACAACTCTATTGAGTGGTACTGTAAAGTATGATGGAAACACCATATATCAGAACACTGCTAGCAGTATTCTGTCTGAAAATGAAAGTGAAGGTGGACTTGAAATGTTGCCAAAGGATTTTTATATGTTTGGCAGGCGCCCATCGAAAAACATAGTCTATGACACAAGCACTCATCGTGACCAGGAAAGCTACCCGCAATACAATAAAGCGCATGTACATTCTGCAACTCCACCACTACCACCGCTGTCAACACAAATACAACCACCGATTGTTCAGGCAAACACTGCCACTATATCTGCGCATAGTGTTCAGTCATCGACGGCGCAACAGCAGCAGTCCCAGCAGTCACAAAGTCTCCTCCAGCACCAGCACAACCACCAACACCATCATAATCGCCAACTCCATCAACATCAACATCAACAACAACAGCAACAACAACAACAAAATCAACTACAAAGCCAGCAGGAAAATTTGAAAATTATTTATGGATCATCGCTGGGACCTCCGCCGCCATTGCAGCTCTTCAGTTATCATCAATACCATCAGCATCAAAAACCACCACCTGCTTATGGAGCTGCCATAAGCCAAATTCGATCTCAGAATAACCAAAATCCTGTGCATTTCAATCGGCTCGCGAACTTGCAGTCGACTGGTGTGAATGAAGCAGCTGCTCCAGCATTGGTTACATCTGCTTCAACAGTGGTAACATCTGCTCCAACAGTGGTCACATCTGCTCCAGTAGCGGTCACAGCTGGCCCAGTAACATCCGCAGCAACAACACACTTTCCATCAGTTGGGCAACATCTGACTGCACAAACTTCACCACCACCACCACCACCACCACCACCGCTGCAACTGCAACCGCAATCACAACCGCCACCAATTGTGCATAATAACTATCATCAGGATAATTTACATCAACAGCAGCAGCAGCAAGAACAACAGCCTCAATTTTCTAATAACCATCATCATCATCTTCATCATCGCCAAAGTCACCAATGTGCTCAGAGTGATTCCTTAACGTCTGCTCCACCTGATGGACTGCCAGCGGAGACATCATCATTATCGTCACCTGAAGACTCTACGACCCAACAAACACAAGCAGCCGCGGCGCTATTACCACCACCACCTCCTCCTCCACTGCAGCCACATTATTCGCATAACACTCACTATCCCCATCGGACATCAGCACCGTCGTCGTGTTCCACAACTTTTTCACCCCAATCGAGTTCACCACCATTTTCAATTGGATCACCGTCATCATCGTCGTCGTCTGTCTTGCGTTACGCTAACTCGCCCGTTACAGCACATTACCTTGAGCGTGATAACGGTGATTTCATTGTGCAAGAGACACCTAAGCACATAGTTGAATGCGTCGAAAAGGACAACGGAGAATTCTCCGTCATCGAACGCATATATCATTCACCACCGAGTGTTGTTCAAATTAATGATGACAGCGAAAGCGACGAATTCATGAGTGTCGATGATGAGGACACCATGACATCTCAGGATGAAGCTGAATTTAAAAAAACTGAAGTTGATCTGTCTTCCTTCGATGCTTCATCATCGGCTGCTGTAGCAGCTGGAGATGTAGGAGCAAAATCAGAATTATTGAAGCAGTCATCCAAAAACGGCATTACTGTTCTCAGTGATGTGCAACTTAATTTGAATGAGTACCTTAATTTGGTTGGAAATATAATTGCATCGAACAAAGGTACAAAAAATCGTTCAGAGCTTATGAAGGTGGAAAAATTTGAACCACCAGATGACATTGAGCAACAAATTGTTGACGGCGGACATGTGGAGAATGTGGAGAATCAGGAAGAACACTTTCTTGTGCAGCAAACGGAAGCTGAAGCTGTCAACGATCCAAAGCAACCACAACAGACTGAGATAATTAATCATAATCATCATCATCATCATATCCAGAATCAGGATCAAAAGACACAGCAGTTACGAATAGATAATATCCCATCGCCGGCACCTTCTTGTTCATCGGTTGTGACGAGTGTTATACGATTGGCAACAAATCCTAGTCATAAGCATGAACATGCTGCGCAAGTAGCAACAGTAAAATCTCCACATAAGAAGACAGACCAACTGTCGCAAACCGAAAGAGCTGACAAGACAAAGCCAATGGATCAAAAGAAGCTACCACCATCGTTGACACCACCACAGCTGCTGTCAAATAGTTATACAGAACCGACATTACCACTTGAAGTCCCTGCAACAGTAGCAGTAAGTAAACCGCATTCTGCAATCCAACAACGACCAATCAAGAAGATTCCCAAGAAGCTTGTGATCAAACCAAAGTCTAAGGCTTTAACTCCCACCGGATCTACAGATGAATTGACGAAGCCGTCAAGTAGTGCAACTCAGAATGTTGTTGTCATATCATCCACACCAGAGGCCAACAACACAACTCAGGAACACGAGAAACTAAAAGACTTGATACTAGAAACAACTAAAGTTGCAGTTACATCGTGCAACATTAACAGCAAAAGTTTCCCAACAACAACTGAAGAAGTTGGACGAAAATCCGAAGAGACGCTTTTGCTCAAGGAAGAAGAAGTCGTCAATGTTGACGATGACACAGAGGAGGAAAAAGCCAATGGTAGTGATAGCGCTAATGTTGCTAATCAACCACAACAACAATCTACAACCAAAGCGGAAGAAGCCGAAGAAATAAAACAGGACACATCCGAATCGGAATTAAGGACCCTGCTGCAGGAGTGCATGAAAAAAGAGGCAATTCGTGAGGCTTTTCTCGACATTCAAATGCAAATGCCGTCGACCACTCCGACACCAACGTTCTCAAACAAAACAGAGTTTGCTGTGAATTCAGCCAAGTCGCAAGAAATGTCGAACTTTTCTGCGGCAGCAACTGTTGCCTCGTCATCTGGTTCACACTCGGGATTTCCATCAGCATCACTGTTCTCTAAACCCTCGATGAGTATATCAGCACTGCGATGCGAGGATGTAAACAACTTGAATGATGATAACGATGGCCATGATGTTGTACATGAAGTGGTCAGCTCAACATACACCGGTCATTCGGCTGATGCGATGAGCAATACTTTTGCCAATACTGCAATTAACGCGGCAGAGGCTCACCACAGCAGTTTCACTGATTATCCTTTCAGTTTTCTTTACGGAGGTGGTGGTGTTGCCAATCAGCTGGAAGGGAGGGGACAGTTTTCACCCATTTCACCGATATCGCCCATTTCGCCGATATACCGCGAGAGCGGTAATGGTGGTGTTGGAGGTTGTGGAGATGGCGATGGTGGTACCACAGCAGCCACTACATCTGGAAGTTGCTCCAATACTGATGACTATAATCGTTACGGTAGTGTTGCTAGTGCAGGCCGTGTCGGCGGGGGCGGTGGTGACGGCGGCGTTACAAGTGCTGGAGTCAGTGGAAGCGCCGCTCCTCAGTGGTATCATCAGCAATCGCAAAATGCAAACCCAGATTTCGATATGGACAATGGCGCTGGCGGCGGTAAATACCTGGATTTGGACTCATGCAAACGAGTTGGTACTATTTCGTCATTTGTCGTCAATGAAAGTTGTAGTCTTGCAACAGCGGACACACTGAATATTCGAACTGACGAGAAAATGCCCGCCAAGGGGGAGATTTCTGAACAGGAAAGTAATTGTGATGTTGATAATTCATGGAGTCAACCGTTTTATGGCGGGGATATTCGGTTTTTCAAAACATTTCCAACATTATTCAATCAGGAGAACAACTGGAATTCAGAAGAATACTTTCATCCGCAGGATCTAAGCTCAACTGCCAAACCAAGAAGCTTCGATTTTCGTCTGCCGGGGGAAACAGAAGCCGCTGGCGGCCAACAACAGCTATTGCAACACCAGGACTCTATTCCATCTACATCGAAAAAGAAGCGAAAACGAACTGCAGAAACTGTAGTGCGTGGTGAAGCAACATTATCGACGCAAAGTCAAGGAATTGATGTAAAACCATCTTTGCCGATCAAATCAAATCAGCCACCACAGCAATCGCCCACCGGAGGAGAGCAGACTCCACATCATGGATCATCACAGCAACCGCAGCCACGTAGGAAAATCTATCAATGCGTTCATTGTAAAGTGCAATTCCCCAAACTTAAAGACCGCAATCTGCACATGATCAAAACACACAACTATGTGCGACAAAATCGACGTCTCATTCGTGAACAGCCAACATCAACGGTGACGAGCGCTGCAGCTGTTACGACGGAGGCGTCGGCGGTAGCGGCTGTAATACCGGCAGGCTCCTTGGTCATGCCACTCGATCAGCAACAACTACTTTTGTCCGAGTCAATCATTGAAGATTCCAAAAGTTCAATTATAAAACTAGAAATGAAAACCGAACAGGAAAAAGAGGATCGTAAGCTGCTCGATTTTGCACTTATTCCATCTTCAGATGCCACTAGCACTGCAGCAACGGTAGCAACTGATAAGACATGTAATACCACTGCCAATAGCACCGGCAGTAATCGTTTATTACGTCCTAACAAATATGATACAATACGAGTTGGGCTCTATCGCATGCTAATAAGTTACAATCTGACCACTCTGAAGCAGAACAACAAAGTCGAAGTGGACAGCTATCTATTTGAGTCAAATTTCTTCTGTTGTGTCGTATGCAAACGGGATTTCATGACAGTGAAACAGTATGATCAACATTTGGCGGAGCATCCAGCAGAATGTTTTACATGCGGCAAAAAATTCAGTCGTTGGAAAAATTTTTCGCTCCATCTGAAACGTCACTTGGGCTGGAAGGAATTCGGTTGTACCGTCTGCGATAAGAAATTCGTTGTGCGCAGTGCTTTGGTGGAGCACCAGCGTATGCACACGGGTCAGATGCCGCTTGAATGTAAAATTTGTGGCAAACACTTCAAAAGATACTCGAATCTGACGCAACACCGCAAGCGTCACGGCAAACAATTAAAACGCAAGAAAGAATACGTCTGCTATTGTGGTGAGGTTCTGCCATCGAAGGCTCGCTTCCATTGGCACAAGGAGACGCACGATGCCAAGCCAAAATGCTGTCCACACTGCTGTGATCGATTCATTCATGCCAACAGTTTGCGGCGTCACATTCGCCTTGCCCACTCGGACAAGTTCGACTACACCGAACCGATGGAGTGTCCCATGTGCAAACAGGTTTTCGCCAAATCCAGCATTAAAGCTCACATGGCCACCCATTCGATGGACACACAACACGACTGCCTCATTTGCAATAAGTCGTTTAGCACCAAATGGAATTTAAAAATTCACAATTGGGTGCATGCCAATCGAACTTCGAAGCCCTTCAAGTGCGAGCACTGTGTGAAGGCATTTGTACGCGAGGTGGACTTCAAAAATCACATGAACGCCCACAAGCAAATCAAACCGTACACGTGCGAGTATTGTGGCTGCAAGTTCATTCGGAAGTACAATTACATGCGGCATCGGCGCGAACACCACGGCAACAAGAAGTTCACTTGTGACCTGTGCAAGAAGTCGTTTCATCGGCACTACTATCTGATCGAACACCGGCGGATACACACGGGCGAACGTCCCTTTCAGTGCACGATATGCGGCAAGAGTTCCACAACAAAGACAAATCATAATAAACATCTCAAAATTCATCATTCGCGAGATCCGTTCACAGTGGAAGCGTAG
Protein Sequence: MAENVQCPVCTLYLHAGMSLFDHLETHPKEQVIKALVHMTVCGGAASVGAGLSPGFCVKTKPATLQTSELQKEEKSTTATSGPAPVSSSPSSLATITGETPTASLTHPVKPTKKQLENFSSSCDSSLSAAEEKEFKKNEQLSTLDPKQPIFDDDTAQTHTTTLLSGTVKYDGNTIYQNTASSILSENESEGGLEMLPKDFYMFGRRPSKNIVYDTSTHRDQESYPQYNKAHVHSATPPLPPLSTQIQPPIVQANTATISAHSVQSSTAQQQQSQQSQSLLQHQHNHQHHHNRQLHQHQHQQQQQQQQQNQLQSQQENLKIIYGSSLGPPPPLQLFSYHQYHQHQKPPPAYGAAISQIRSQNNQNPVHFNRLANLQSTGVNEAAAPALVTSASTVVTSAPTVVTSAPVAVTAGPVTSAATTHFPSVGQHLTAQTSPPPPPPPPPLQLQPQSQPPPIVHNNYHQDNLHQQQQQQEQQPQFSNNHHHHLHHRQSHQCAQSDSLTSAPPDGLPAETSSLSSPEDSTTQQTQAAAALLPPPPPPPLQPHYSHNTHYPHRTSAPSSCSTTFSPQSSSPPFSIGSPSSSSSSVLRYANSPVTAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYHSPPSVVQINDDSESDEFMSVDDEDTMTSQDEAEFKKTEVDLSSFDASSSAAVAAGDVGAKSELLKQSSKNGITVLSDVQLNLNEYLNLVGNIIASNKGTKNRSELMKVEKFEPPDDIEQQIVDGGHVENVENQEEHFLVQQTEAEAVNDPKQPQQTEIINHNHHHHHIQNQDQKTQQLRIDNIPSPAPSCSSVVTSVIRLATNPSHKHEHAAQVATVKSPHKKTDQLSQTERADKTKPMDQKKLPPSLTPPQLLSNSYTEPTLPLEVPATVAVSKPHSAIQQRPIKKIPKKLVIKPKSKALTPTGSTDELTKPSSSATQNVVVISSTPEANNTTQEHEKLKDLILETTKVAVTSCNINSKSFPTTTEEVGRKSEETLLLKEEEVVNVDDDTEEEKANGSDSANVANQPQQQSTTKAEEAEEIKQDTSESELRTLLQECMKKEAIREAFLDIQMQMPSTTPTPTFSNKTEFAVNSAKSQEMSNFSAAATVASSSGSHSGFPSASLFSKPSMSISALRCEDVNNLNDDNDGHDVVHEVVSSTYTGHSADAMSNTFANTAINAAEAHHSSFTDYPFSFLYGGGGVANQLEGRGQFSPISPISPISPIYRESGNGGVGGCGDGDGGTTAATTSGSCSNTDDYNRYGSVASAGRVGGGGGDGGVTSAGVSGSAAPQWYHQQSQNANPDFDMDNGAGGGKYLDLDSCKRVGTISSFVVNESCSLATADTLNIRTDEKMPAKGEISEQESNCDVDNSWSQPFYGGDIRFFKTFPTLFNQENNWNSEEYFHPQDLSSTAKPRSFDFRLPGETEAAGGQQQLLQHQDSIPSTSKKKRKRTAETVVRGEATLSTQSQGIDVKPSLPIKSNQPPQQSPTGGEQTPHHGSSQQPQPRRKIYQCVHCKVQFPKLKDRNLHMIKTHNYVRQNRRLIREQPTSTVTSAAAVTTEASAVAAVIPAGSLVMPLDQQQLLLSESIIEDSKSSIIKLEMKTEQEKEDRKLLDFALIPSSDATSTAATVATDKTCNTTANSTGSNRLLRPNKYDTIRVGLYRMLISYNLTTLKQNNKVEVDSYLFESNFFCCVVCKRDFMTVKQYDQHLAEHPAECFTCGKKFSRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHQRMHTGQMPLECKICGKHFKRYSNLTQHRKRHGKQLKRKKEYVCYCGEVLPSKARFHWHKETHDAKPKCCPHCCDRFIHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKSSIKAHMATHSMDTQHDCLICNKSFSTKWNLKIHNWVHANRTSKPFKCEHCVKAFVREVDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -