Basic Information

Insect: Nephrocerus scutellatus
Gene Symbol: RREB1
Assembly: GCA_947095585.1
Location: OX352763.1:25547249-25555177[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.038 6.2 8.6 0.8 1 21 277 297 277 299 0.93

2 14 0.00035 0.058 15.0 0.2 1 23 309 331 309 331 0.98

3 14 2.5e-05 0.004 18.7 7.5 1 23 337 359 337 359 0.98

4 14 0.03 5 8.9 2.2 2 19 624 641 624 641 0.97

5 14 5.4 9e+02 1.8 1.4 1 11 687 697 687 707 0.82

6 14 0.0093 1.5 10.5 0.1 1 23 882 904 882 904 0.97

7 14 0.00028 0.047 15.3 2.3 1 23 913 935 913 935 0.99

8 14 0.00087 0.14 13.8 2.0 1 23 941 964 941 964 0.97

9 14 0.001 0.16 13.6 2.1 1 23 1363 1386 1363 1386 0.95

10 14 9.1e-05 0.015 16.9 0.3 2 23 1719 1740 1718 1740 0.97

11 14 0.15 25 6.7 6.3 1 23 1746 1769 1746 1769 0.97

12 14 3.9 6.5e+02 2.3 9.3 1 23 1891 1913 1891 1914 0.96

13 14 0.088 15 7.5 1.1 3 23 1962 1982 1961 1982 0.91

14 14 0.0015 0.24 13.1 4.8 1 23 1988 2010 1988 2010 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.038	6.2	8.6	0.8	1	21	277	297	277	299	0.93
2	14	0.00035	0.058	15.0	0.2	1	23	309	331	309	331	0.98
3	14	2.5e-05	0.004	18.7	7.5	1	23	337	359	337	359	0.98
4	14	0.03	5	8.9	2.2	2	19	624	641	624	641	0.97
5	14	5.4	9e+02	1.8	1.4	1	11	687	697	687	707	0.82
6	14	0.0093	1.5	10.5	0.1	1	23	882	904	882	904	0.97
7	14	0.00028	0.047	15.3	2.3	1	23	913	935	913	935	0.99
8	14	0.00087	0.14	13.8	2.0	1	23	941	964	941	964	0.97
9	14	0.001	0.16	13.6	2.1	1	23	1363	1386	1363	1386	0.95
10	14	9.1e-05	0.015	16.9	0.3	2	23	1719	1740	1718	1740	0.97
11	14	0.15	25	6.7	6.3	1	23	1746	1769	1746	1769	0.97
12	14	3.9	6.5e+02	2.3	9.3	1	23	1891	1913	1891	1914	0.96
13	14	0.088	15	7.5	1.1	3	23	1962	1982	1961	1982	0.91
14	14	0.0015	0.24	13.1	4.8	1	23	1988	2010	1988	2010	0.99

Sequence Information

Coding Sequence: ATGGAACGACGTGCTTCGACCAGCTCAGAATCCTCATTGGAACACCTGGACTTGGGACGTACGCCAAAGAAAGCAATTACTTCAGCCACATCGACACCGAATGCAAATGCATCGACTGCCAGTAGCCTAAATTCGGAAGTCATCGGCAACAGCAACAGCAAACACACAAAACTGACAACGAAAAACCATCAGCATCACCATCATCATCATTATCAGCCCCTAGATTCAGATGCCGGCGATTATGATGATGATGAATCAGCGGACGATGATGATGAGAAGCAAGCGGCGCCGCCAACACAGATGATAGTGCGGTCCCATCGTCATCACCATCATCATCACCATAAGAGGCGTAGTAGTGGACGAGAGAAGCGCAACGTCCAATTGGAATATAATACAGAGAATCCACATTCGTTGCGTAAGAAATTTCGTTTCAGCAGCGGCAGTATTGTTGGCAGTCATAATCAAATTAATGGAGGTGTCAGTGCCGGAGTTGTCGCTACATTGCCGCCAGCATTAGCTTTAACAGCCGCAACAGCAGCAGCCACAACGACGACAAATCGAACAGCGAACAACGAATCGGGATTCGTCGATGCCAGCAGCAGTAATAGTCACATTTTGAATGCATCAGCTGTTtcgtcgtcgcaacattcgccatcatgttcacaatcgccgccatcgtcgtcggcgtcgtcatcatcatcatcatcatcgtcatcatcatcagtatctccatcacaagctttatcgcccgctcaattgtcatcggcagcgtcAGCTGCTTCAGTTTCTAGTCCCGAATCAGGTATTGGCGAACGTGATGATATGAAGTATTTATGCCCAATATGCGAGGTTGTGTCAGCGACTCCACACGAATTTACCAATCACATCCGATGTCACAATTACTCTTCAGGCGACACAGAGAATTTCACCTGTCGTATATGCTCGAAGGTGCTATCATCAGCATCGTCATTAGATCGTCACGTATTGGTTCATACTGGGGAACGTCCATTCAATTGTAAATATTGTCACCTCACATTTACAACCAATGGCAATATGCATCGTCATATGCGCACACACAAACAGCATCAGCATAACCATCATCGTCGGAGTTCGAATGGAACATCCAAAGGAGGGGCGGCAGCAGCAGCAGCAGCAGCGTCAACTATGGCGACAACAGCGCCAACAAGTGTTACATCAAATGTTATAACGCCATTAACTAACGGTGCCGGTGCTGGTGCTGGCGCTGCAAAATTGCCATCACCGTCGACGACAAGAGTAGCTGCCTCTTGTGATCCGCTCAACGCCACTTTGAATGAACGAGAAGAAGGCGGTGTTAATAACAAGAATGCTGGTAGCATCAGCTGCACTAATGGTGATGGGGGCGGTGGTGTAGAAAGTTACGAAAGTGATGATGGTGGTTGCTCAACAGACTCATCAAGTGCCATCAGCCAAAGTTCAAATATTATTAACAATAATAACAACAACAAAAACAATAATAATAATAACAATAATGACAGTACCAACCATAACAACAACAATAACAATTTTAAACGCAAAAGCACCGACAGCTCCGACGATATTGCATTGATGAAGCGACGCGTGAAGACCACAATTAACAATAATAACATAATCGATGAACACGATGATGACTTTGCGACCAGTGCTGTCGAGATGAGGCGTCTTATAAATGAGAAACATCATCATAATTATAATCATCAACAGCAACACCCGCACCAGCATCAACAACATCAACAACAGCTACAGCTACTGCTCCAGAAACTCTCGTGTCCTGTCTGTAATCGTTGTGATTTTGAGAATATGCTGACACTGAGCGCTCACATGGATGGCGAACACTCGGACATACCGGCGAAATGCCGACACTGTGATGTCGTATTCAGGACACATCGTCAACTCAATGTACATCCGTGCACAAGAACAGTGAAGGTAACACATGGCTTCAATGATTTGACCTTTGTCGATTTCTCCAGTGAGAAGTTTCCACTCATTGCCAAGTCACTGTGCGAGCAGAGTTTGCGAACCGCAGTGAGCAGTCAAAAATTCGAGTGTCACAAATGCTATAGAGCATTTCCGTGTGCCAGCGCTGTCGACATTCACACAAAGGATTGTAGCGAAAGCGATTCGATGAAACTTTTTGCAACCGCCCAAGATTTCTCGAGGCAAACGCAACGTAAACAACGTTCCCACAGCGAAAGTTCAATGGTCGATCAGGAAGATGGCGCCGCGTGTGTTGATGCTTCAACAGCAGTTGAGGACAATCGCCGCGAAGAGTTCTTTGCGCATTTGTACTTGAAGAACAAGCCACACGCTCAAAGTATGTCTAGCTTGTCCGATCATTCGGATGTTATGAGAGATGAGAACATTGGGAAGACACCAAAAAAGCACACCCAGAGTTGCTCTAATCTAGCCGACCAGTCAGACGAAGGCCACCAGCATAACGATTCCAAAGATTTGGCTGACATTCAATCGATTCTCAATATGACATCGTCGTCGACTAGTAATTTCTTGAAGAACTTTGAGAATTCGGTTAACACTCCGAGCAGCAATTATGGAATGGAGAAGGATGAAGAGGAGGCGCAGGATGCCTTTACTTCGGAGTTCCGCAAGATGAAGTTGCGGGGTGAGTTTCCGTGCAAGTTGTGCACTGCAGTGTTTCCTAATTTGCGCGCTCTTAAGGGTCACAATCGCATTCATTTGAGTGCTGCTGGGCCAGGTCCTTATCGCTGCAACATGTGCCCACACACGATCCATGACAAGGCCGCTTTGGTTCGTCATATGCGCACACACAACGGCGACCGGCCCTATGAATGTGCAGTCTGCAATTATGCGTTTACAACAAAAGCCAACTGTGAACGCCATCTACGAAATCGGCACGCCAAGACGACGCGAGATGATGTGAAACGGGCGATAATTTATCATCCTTCAGAGGACTCCAGTTGTGATGATCCCGGCAAGAAGTTGCACATGTTCTCTTCGCCTGAATTTGATAATGATGATGTTGAGCAAAATTATCAGCCCAAAGATCGTTCTACACCAGTGTCACACTTAAAGGAGATGCTTACTGCCGATCCTGTAAAGCCAATGAAGATTCAGGTGAAGAGTTTGGAAAAATTACTCGACAAAACTCCCTGTGTGTCGTCGGTTTATGGTGGAAGTTATGAAGATGTAGACAAAGACAGAGAATCCGAAACTCACAGTGAATCTGGACGTCCAATTGACCTAAGCATGGATGTGCTTGACCTGAGTAAAAAATCAATGAAATCTGTTGAGAAGAAACATACGGTAACCGTTCAAAGCCTCGTTTCGCAGGCAAAGCCTGCAGTTGTAGTAACAGCACCGCAAGTTTCTATCGCATCACCAACGCCAGCATCAGTAACTGCTCCTGCACGAGCAGCTCCCGTTACGGTCTCCGCCGCTGTGCCTGAAGAGCCTAAAATTGATCTGTCAGTTTTGGAGAAGAACCAACAATTTCTTCTTGCCCAACAACAATTGCTTAATGAGGCAATGCCGAAAATGGATCCAGCACATTATTTCCATCAACTTTATAGGAACTTTGTGTTTCCTCCACTGCATCCGTTTTTTCTACAAAATTCGTTCCTACCCAGCAATCTGGGCGATTTGAATAAATTTGCACCACTGATGAATCATATGTTCGCCGGTGGCAATGCTAATGATGGGAAAAATAACAGTGTTACCAGTGTTAGTCAAAATATTCCAGCCCCAGTCCAGTCGCTTGTCGACATGGGCAGTAATCAATTGCCTAAAGCAGCTACAAGCCAATCAGGTGCAGGTCATTCATTGGTGACAGCTGCCACAACATCATCATCAGCACACCTCTTGCCAAAGCCTATTGCTCCGACATCACCACAGATCAACATTCCACGACATCCCCATATGCCAACATCTGTGCAACACCAGCAACAGCCGCAACCACAGCACCATAGCAGCCCTGGAAGTATCAGTGCATCTCATGCTGCTATATCGCTTTCGGGTCCAGTTAAAATGGTCATCAAAAATGGTGTCCTCATGCCAAAACAGAAGCAACGCCGTTATCGTACCGAACGTCCGTTCGCCTGTGAACATTGCTCGGCAAGATTCACACTTCGCTCCAATATGGAGCGTCACATCAAGCAACAGCATCCACAGTATTGGGCGCAACGTCAACGTAGCGGGCATCACATCATGCGCGGTCGTGGTGGCAGTATCAGCGGTAGCAGTTCGTCGGGATTGTCACACATGCAGTCGGCTGCTGCTGCTGCTAACCAGCAACAAATGGTTGGCGGATCTCCAATGAACAGTGCGCTCTCTCCAAATCCACTAAGTGCTATTTCCGACCATGTGAAATATGCCATCCTCGCTCAACAATTGAAAGCCCGCAAAGATACGGACCTTTTGCAGCAGGCTCTGTCGCACGGCTCAAGCAGTGTTGCGCCAAGTCACTTGGCATTGGCTTCCGTTCACAATGCGCAAGGCCATATTACACAGTCAAACAATGGCAATGGCATTATGGAAGACGATGAACCTAAATTAGTTATTGATGAGGATGATGACGAACCGGATCATGAAGAATTAGAAGATCACGAAGAAGTCGAACAAGAACACGAATATGATGTAGAAGATGTAAAGCCAGAAAATCTAACCAAGCGTGATTCGCAAGCGGCAACGAATGTAGCAGCAAAAAAAGTAGCCGAAACCATTCTGGAACAGGCAATTAAAGCTGGCAGCAGCAGTGTAGCAAGCGCTAAAAGTCAGCCTTTGGCTGCGATTGTTAGCAGCAGCGAAGATGCCGCTGCAGTAGCGGTAAACAAAGATTTTGGATTGAAAATATCCAAAAATATGCTTGCTCAAGCCGAATCAGTAGGGAAGTTCCTCAAAGAAGTAGCCAGCTCTCCGTTTAAAGATGAATCCACTGATTTGGCATCGGTTTCGAAATTGGTGGACAATGCCACAAACTCAGTGTCCTTTAACAACTACTTTCGGCCAAGTGATGTTGCCAATCAAATGGAACAAAGCGACGAGGAGGGTCTAGTCGCATCGGGCAGCGCGTCCGAAAGCAACAATTCAGGCCCCGAAGACATGTCCAGTTCAATGAAGCCGAAAAAGAAATCAGCCTACAGTTTGGCGCCTAATCGCGTCTCGTGCCCCTACTGTCAAAGGATGTTCCCCTGGTCGAGCTCTTTGCGACGCCACATTTTGACCCATACTGGCCAAAAACCCTTCAAATGCTCACATTGTCCACTGCTTTTCACCACCAAGAGCAACTGTGATCGCCATTTATTGCGCAAACATGGCAACGTCGAATCGGCGGTTTCCCTTTATGTACCAATTGAAGATGTCTCCGAGCCAATGCCAGTTCCGAAATCTGTCGAAGAAATTGAACAGCAACAACAGCTTGAGCTCGAGCTACAACGCCAACAAGAGGAAGAGGATCTGAGAGAAGAGTTGGAGCTGGAACAACAGCAACAGCAGCAGCGCCAACATCAACTGAAGCACCGTGAACCACGTGAACATGAACTCGAACAACAACAACAACAACAGTTGCATAAACAACTTTCATCACAATCGCCGCTCAATTTGAATCAAGCTGCCACCGGTGCCAGTGCGAAAGCTCAAGAAACTCAAACTCAAAGCATATCTTCTTCGGAGCTACCGTACAAATGTCACCTGTGCGACAGTTCGTTTTCTGAGAGATTCCACTGTCTGGAACATATTAAAATCCATCACTGCCAAGATTTCGCTCTGCTCTTGGCGAAAGGTGCCATCGACACTGAAGCCGAACCAAATCATGTCCAGTCGACGGAGGACGACGAAAAGCGTGAGGACAGCCGCGGCAAATATCCCGACTATAGCAACCGCAAAGTAATTTGCGCCTTCTGTATGCGTCGCTTTTGGTCCACTGAAGATCTGCGCCGCCACATGAGAACACATTCAGGTGAACGGCCATTTCAGTGCGACATCTGTTTGCGTAAATTCACCCTAAAACACAGTATGTTGCGTCACATGAAGAAACATAACGGCGGACACAACAACAGCCAAACGAATGCGGCAAACAGCGGGTCCGACATGTCAGATGACGAACAACCATCGCCGACAAACATGATGCTGGCCAACACTCTGCGGACGCATAAAATTCAGGAACTCCTCAGCAAAGCTAGCGAATGGCGCAACAATCGTATGTCCGGCGAACACAAGGAGAACATTGAGGAGCATAATAATTCCGACTTGATTGGCAATCTTTTGGGCATCAGCGACCAAGGTATTCTCAATAAATTGCTATCATCGGCCGATGAAGCTGCCAAGTTTTTGGGTGTGGACAATAAATGA
Protein Sequence: MERRASTSSESSLEHLDLGRTPKKAITSATSTPNANASTASSLNSEVIGNSNSKHTKLTTKNHQHHHHHHYQPLDSDAGDYDDDESADDDDEKQAAPPTQMIVRSHRHHHHHHHKRRSSGREKRNVQLEYNTENPHSLRKKFRFSSGSIVGSHNQINGGVSAGVVATLPPALALTAATAAATTTTNRTANNESGFVDASSSNSHILNASAVSSSQHSPSCSQSPPSSSASSSSSSSSSSSSVSPSQALSPAQLSSAASAASVSSPESGIGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHRRSSNGTSKGGAAAAAAAASTMATTAPTSVTSNVITPLTNGAGAGAGAAKLPSPSTTRVAASCDPLNATLNEREEGGVNNKNAGSISCTNGDGGGGVESYESDDGGCSTDSSSAISQSSNIINNNNNNKNNNNNNNNDSTNHNNNNNNFKRKSTDSSDDIALMKRRVKTTINNNNIIDEHDDDFATSAVEMRRLINEKHHHNYNHQQQHPHQHQQHQQQLQLLLQKLSCPVCNRCDFENMLTLSAHMDGEHSDIPAKCRHCDVVFRTHRQLNVHPCTRTVKVTHGFNDLTFVDFSSEKFPLIAKSLCEQSLRTAVSSQKFECHKCYRAFPCASAVDIHTKDCSESDSMKLFATAQDFSRQTQRKQRSHSESSMVDQEDGAACVDASTAVEDNRREEFFAHLYLKNKPHAQSMSSLSDHSDVMRDENIGKTPKKHTQSCSNLADQSDEGHQHNDSKDLADIQSILNMTSSSTSNFLKNFENSVNTPSSNYGMEKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCPHTIHDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSSCDDPGKKLHMFSSPEFDNDDVEQNYQPKDRSTPVSHLKEMLTADPVKPMKIQVKSLEKLLDKTPCVSSVYGGSYEDVDKDRESETHSESGRPIDLSMDVLDLSKKSMKSVEKKHTVTVQSLVSQAKPAVVVTAPQVSIASPTPASVTAPARAAPVTVSAAVPEEPKIDLSVLEKNQQFLLAQQQLLNEAMPKMDPAHYFHQLYRNFVFPPLHPFFLQNSFLPSNLGDLNKFAPLMNHMFAGGNANDGKNNSVTSVSQNIPAPVQSLVDMGSNQLPKAATSQSGAGHSLVTAATTSSSAHLLPKPIAPTSPQINIPRHPHMPTSVQHQQQPQPQHHSSPGSISASHAAISLSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRGGSISGSSSSGLSHMQSAAAAANQQQMVGGSPMNSALSPNPLSAISDHVKYAILAQQLKARKDTDLLQQALSHGSSSVAPSHLALASVHNAQGHITQSNNGNGIMEDDEPKLVIDEDDDEPDHEELEDHEEVEQEHEYDVEDVKPENLTKRDSQAATNVAAKKVAETILEQAIKAGSSSVASAKSQPLAAIVSSSEDAAAVAVNKDFGLKISKNMLAQAESVGKFLKEVASSPFKDESTDLASVSKLVDNATNSVSFNNYFRPSDVANQMEQSDEEGLVASGSASESNNSGPEDMSSSMKPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVSEPMPVPKSVEEIEQQQQLELELQRQQEEEDLREELELEQQQQQQRQHQLKHREPREHELEQQQQQQLHKQLSSQSPLNLNQAATGASAKAQETQTQSISSSELPYKCHLCDSSFSERFHCLEHIKIHHCQDFALLLAKGAIDTEAEPNHVQSTEDDEKREDSRGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHNGGHNNSQTNAANSGSDMSDDEQPSPTNMMLANTLRTHKIQELLSKASEWRNNRMSGEHKENIEEHNNSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -