Basic Information

Insect: Nephrocerus scutellatus
Gene Symbol: -
Assembly: GCA_947095585.1
Location: OX352761.1:120479567-120483675[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00016 0.026 16.1 0.8 1 23 174 196 174 196 0.95

2 15 0.00023 0.037 15.6 1.9 1 23 202 224 202 224 0.96

3 15 2.7e-05 0.0044 18.5 0.4 1 23 387 409 387 409 0.98

4 15 0.0011 0.19 13.4 0.2 1 23 415 437 415 437 0.98

5 15 0.00029 0.047 15.3 7.0 1 23 471 493 471 493 0.97

6 15 0.019 3.1 9.6 1.1 1 23 505 527 505 527 0.91

7 15 0.0026 0.43 12.3 0.4 1 23 533 556 533 556 0.96

8 15 0.25 42 6.0 0.3 5 19 567 581 564 582 0.91

9 15 0.00015 0.025 16.2 5.6 1 23 591 613 591 613 0.97

10 15 0.056 9.1 8.1 1.7 3 23 620 640 618 640 0.96

11 15 8.7e-06 0.0014 20.1 1.0 1 23 649 671 649 671 0.98

12 15 0.0044 0.73 11.6 0.2 3 23 679 699 677 699 0.97

13 15 0.0003 0.05 15.2 0.5 3 23 707 727 705 728 0.95

14 15 0.0045 0.73 11.5 0.1 1 23 738 760 738 760 0.97

15 15 0.015 2.5 9.9 0.0 1 20 1236 1255 1236 1258 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00016	0.026	16.1	0.8	1	23	174	196	174	196	0.95
2	15	0.00023	0.037	15.6	1.9	1	23	202	224	202	224	0.96
3	15	2.7e-05	0.0044	18.5	0.4	1	23	387	409	387	409	0.98
4	15	0.0011	0.19	13.4	0.2	1	23	415	437	415	437	0.98
5	15	0.00029	0.047	15.3	7.0	1	23	471	493	471	493	0.97
6	15	0.019	3.1	9.6	1.1	1	23	505	527	505	527	0.91
7	15	0.0026	0.43	12.3	0.4	1	23	533	556	533	556	0.96
8	15	0.25	42	6.0	0.3	5	19	567	581	564	582	0.91
9	15	0.00015	0.025	16.2	5.6	1	23	591	613	591	613	0.97
10	15	0.056	9.1	8.1	1.7	3	23	620	640	618	640	0.96
11	15	8.7e-06	0.0014	20.1	1.0	1	23	649	671	649	671	0.98
12	15	0.0044	0.73	11.6	0.2	3	23	679	699	677	699	0.97
13	15	0.0003	0.05	15.2	0.5	3	23	707	727	705	728	0.95
14	15	0.0045	0.73	11.5	0.1	1	23	738	760	738	760	0.97
15	15	0.015	2.5	9.9	0.0	1	20	1236	1255	1236	1258	0.93

Sequence Information

Coding Sequence: ATGGACAGTGGTCAGTCGTATGGAATTCAGTGGGTCCCACAAGGTGACATCAAATCGACTGGTCACTTAATAATTGGTTCACAATCTTCTGAAGACGATGTCCTGGGCAGTAACTGCGTGGGTAGACATGTGCAGCATTCTTCACACGGATACCTGGTGCATGAGATGCCAAGCGAGGAAGACATTGATCAAATTGCAGCTGAAAATTTAATTTTCATGGCGCGCGATGGCCAGATGATGGCGGAAATGATTGGCGATGGTGTTTGTTCAGACGTCAATGAGACGACAGAGCACCACGTTGTCGACAACGATGACAGTGGCATCGTACAATTCAATGAAGATTATTCAGAGGCTCAAATGGTTACAGAGGAAGTCATCACGGACGACTGGGTCCAGCATCAGGGTGAAGAGAGAGTGGAAATACCTGTTGAGCAGATTTGCGGATCGAATTCCAACATATTGCTGGATATTGAAGTGCCATTACCTACAGTTCAAGATGAATACACAGCATTGCGGCCTTATCCCTGTGATTTCTGTAGTCGCCGTTTTCGCAAGAAAGTCAGCCTTATGAATCACATGGTAGCACATCAAAATGATCGTCCACACGTGTGCAAATTATGTGGATCAAGATTTTTTCGCCGGTCGGATCTCATTAACCATTTGAAGGCTCACGCGGAGGCTTCAGAGCCAGAATATGATGATACAGATTTTATGAATTTTTCAGATGCACAGCATAAGCAGGGCAGTACACATCATTCAATTGATCATTACTACGATCACGACTGGACAAAAACAACAACAAGAACCCATTCAGCGACACATAAACCAAGAAGAACACATCAAATAACAAATAATCATAGCAGCACCAGTAGTAGCAGCAATCAGAACAATAATAACAACCACCACTTACATGGTCATCATCACAGTAGGCGTACCAATAGAATTAAGCCAAAGGAGGAGAATTATACAATCGATGAGACACTGCGACAACAACAAGGGTATCAGCAACAACAGCAGTTCGAAATACAACAACAACAGCTGGAGTATAAACAGCAACAACACTCAGAAGAACGTGTGTTCGCTTCGCCCACCATCGAACGAGAAGTTGAAACTATCACTCCGGAGGAACAGTTTCCAGTCGTTGACGAGAATAAGCCATTTGTGTGTCAGCAGTGTGGCTTAGCATTTTCCCGCGAGAAGGCTATGCAATCACATTTAAAGACCCATCGAAATGACTCGCCCTTCGAGTGCAACACCTGCAATGAAATATTTTGGGATCTGGCCAGCCTGCAGGAACATCAGAAGACTCATCAATTCGAAGCAAGTAATTCGGAGTATGAACCAGCCGACGATTCGCAGAGTGATTCCGAGTCGGAACTATTGTATGGCGGTAATTCTGAGTCGGAACATTACTATTGCCACAAGTGTGGCATGTCTTTCCACCGGAAAAATCTACTCAAACGTCATGCAAAGCAGCATATAAAGGAAGAGGAAGTCGACAATAAGGATCAGCATTGCTGCAGTACATGCGGTGAGACATTTAGCGAAGCGCTCGATTTGCTGGCACACGCTGAGTTTCATGCACGTTATCCACCGTTTAAATGTGTGCTTTGCGGTGAATCGTTTTTCGATGAGGCAGCAATAAAGCATCACTTGAACAATGTGCACGGCTCTGAGATGGCAACCAATTCGTGTATTCTTTGCGGCAAGGAATGTCGCGACCGTAAGGCGCTCATCAAGCACGCTTGGGATCATTCACGTGAAAAGTGTCATTCGTGTTCGAAATGTGGAAAGAATTTTCACAACAAGGCGCGTCTCAAGCGGCACATGGCATCGCATCGGGATAAATCAGTAAATTGTGATGTATGCCATGAGGAATTTCCCGACGGACGATCGCTTTCGAATCACAGACATTCGCACAGTGCTACATCATCTGGAAAGCTGTTTCCATGTCACGAGTGTGGCAAAACATTTGGTTCGCGCAGTTCGCAGCAGATTCATGTACGCATTCACACCGGTGAGCGTCCGTACGGATGTCGTTTCTGTTGGAAAGCCTTTGCCGACGGTGGTACTCTGCGTAAACACGAACGCATTCATACGGGCGAAAAACCATACGGCTGTTCCGTGTGCCCACGTGCCTTTAACCAACGAGTGGTGTTGCGTGAACACATTCGCTCTCATCACTCGGCTATTGACAAGAAGCGAGGCACATACTACTGTTCCGTTTGCAGCGCTGTGTTGTCCAACTCAACGGAACTCATCCAGCATCTGATACAACATAGCGATATGAATACCGCCAAGCAACGCCAGCCAATTACGGGACCACGTAAATACAAACGGCGCCGTAAGCTTAAGCCACACGAAATTGAACGGCTACGCTCTGAGAAAAAAATCACTGGAGGAAGCAGTGACATAGATATCTCTGATTTCGACATGAATAATGTCGACGATTTGCTTGGTAAAGCGGAAGGTGGATCTCCCACTACTTCTTCTCCCCCTCCTCCACCAAAACCGGTAAAATCTAAGAAACAGTCCTCAACTGCGTCAGCGGAAACATCGACGAAAAAACGTTACAATTCCACTGGTGGCAGCTCGACAGAAAAACTTTCTAGCAGTAACTGGCAATCCAAATTCATGAACTCATCAAATGACGATACCTACAAATCGCTGCTCTCAAATCTGGAAAACACTTTGCAGAGCATTGACACATTGGTTGTGAGTAATCCCGGTTCGTATCTCACCGCACCGGAAGTGATAACATCAGATGTACAGCCTATCACATTTACTGGCAGTACTTCGATGACGACGAAACAATCAACCAATCAAGCTGTTATATCGACGACGACGACGACAAATCCACGTCGTCTTAAAGCGCAAAAACCATCATCATCATCATCAGGGAAAACCAGTGGTAGTCGTCCGCGAATGATTCACACCGAGAAGACTCGAGTTGCTGCCGACTTTGGTAAACGACGGTCAAAAACTTTAGTAGCACGCTCTGAACGTCATACGATGATGAAGATGCATGTCCCGACGCAAATGACAGCACAAATAACGACCGCAAAACCGCCAACTCTATCCAACCTCGAGGACGATTATGAAATAATTTCGCCAAATAGTTACCCGCCAAATCAAATCTCATCTAGTCCACTTCACATAAAGCAGGAGCCTTTGACCACAAGTATCGTTGGCTCCTGCTCATCCTCCTCCCGAAGTGATCTCTACGATGCCCAGCTGCTGCTCGAAGCAACTGCTCTGCGCAAAGATTACGACAAATACAATCCGGCTATAGTCAATGATTTGGAAGAGATTCTTCGATCGCCTGACAAGTCGACGACGACGACAACAATAACGCCAAAGTCGTCAGCTTGTGAGCGTTTGCTAATTGATGATCAAATTATTAAAGATGAAACATCTCTCATCCCACAGTCACTTGATTATGTACGTCGGTCGACGCGTTCGCGACGTCCAGTATCGAATCGCAGATACTTGGAATTTGATACGGAAGTTACACCAGCTGTGTCATCATCGTGTCGTGGTAGCAACAGCAATAAGACAAAGATTGATGCAACAAACCGTGGACACTCGGCGCGAGTTAATGCTGTAGCTACTATAAGATCAACCACGTTGCCAGTGCAGCAGTCGGCTCCTCCACAGCAGCTGGTGGCATCTCCATCAGCGCCGCCCCAACGCAAGCAGCAGTATTTCGAGTGCGAAATGTGTTCGGCGGTTTTTCCAGATCGCGCTCAACTCTTGGACCATGTGCCGATTCATATTTAG
Protein Sequence: MDSGQSYGIQWVPQGDIKSTGHLIIGSQSSEDDVLGSNCVGRHVQHSSHGYLVHEMPSEEDIDQIAAENLIFMARDGQMMAEMIGDGVCSDVNETTEHHVVDNDDSGIVQFNEDYSEAQMVTEEVITDDWVQHQGEERVEIPVEQICGSNSNILLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKVSLMNHMVAHQNDRPHVCKLCGSRFFRRSDLINHLKAHAEASEPEYDDTDFMNFSDAQHKQGSTHHSIDHYYDHDWTKTTTRTHSATHKPRRTHQITNNHSSTSSSSNQNNNNNHHLHGHHHSRRTNRIKPKEENYTIDETLRQQQGYQQQQQFEIQQQQLEYKQQQHSEERVFASPTIEREVETITPEEQFPVVDENKPFVCQQCGLAFSREKAMQSHLKTHRNDSPFECNTCNEIFWDLASLQEHQKTHQFEASNSEYEPADDSQSDSESELLYGGNSESEHYYCHKCGMSFHRKNLLKRHAKQHIKEEEVDNKDQHCCSTCGETFSEALDLLAHAEFHARYPPFKCVLCGESFFDEAAIKHHLNNVHGSEMATNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVNCDVCHEEFPDGRSLSNHRHSHSATSSGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCSVCPRAFNQRVVLREHIRSHHSAIDKKRGTYYCSVCSAVLSNSTELIQHLIQHSDMNTAKQRQPITGPRKYKRRRKLKPHEIERLRSEKKITGGSSDIDISDFDMNNVDDLLGKAEGGSPTTSSPPPPPKPVKSKKQSSTASAETSTKKRYNSTGGSSTEKLSSSNWQSKFMNSSNDDTYKSLLSNLENTLQSIDTLVVSNPGSYLTAPEVITSDVQPITFTGSTSMTTKQSTNQAVISTTTTTNPRRLKAQKPSSSSSGKTSGSRPRMIHTEKTRVAADFGKRRSKTLVARSERHTMMKMHVPTQMTAQITTAKPPTLSNLEDDYEIISPNSYPPNQISSSPLHIKQEPLTTSIVGSCSSSSRSDLYDAQLLLEATALRKDYDKYNPAIVNDLEEILRSPDKSTTTTTITPKSSACERLLIDDQIIKDETSLIPQSLDYVRRSTRSRRPVSNRRYLEFDTEVTPAVSSSCRGSNSNKTKIDATNRGHSARVNAVATIRSTTLPVQQSAPPQQLVASPSAPPQRKQQYFECEMCSAVFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -