Basic Information

Insect: Nephrocerus scutellatus
Gene Symbol: su(Hw)
Assembly: GCA_947095585.1
Location: OX352761.1:122429772-122433048[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00031 0.051 15.2 1.4 1 20 127 146 127 148 0.95

2 12 1.9e-05 0.0031 19.0 0.5 3 23 199 220 197 220 0.92

3 12 0.019 3.1 9.6 0.1 1 23 226 248 226 248 0.97

4 12 2.2e-06 0.00036 21.9 2.5 1 21 255 275 255 276 0.95

5 12 2.1e-05 0.0034 18.9 0.9 1 23 287 309 287 309 0.98

6 12 8.1e-06 0.0013 20.2 3.4 1 23 320 342 320 342 0.99

7 12 4.7e-05 0.0077 17.8 0.8 1 23 348 370 348 370 0.97

8 12 6.1e-05 0.01 17.4 0.8 1 23 376 398 376 398 0.98

9 12 2e-06 0.00032 22.1 0.1 3 23 406 426 405 426 0.99

10 12 0.00027 0.045 15.4 3.0 1 23 430 453 430 453 0.97

11 12 0.19 32 6.4 2.3 1 23 484 508 484 508 0.90

12 12 0.73 1.2e+02 4.6 1.6 2 23 514 536 513 536 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00031	0.051	15.2	1.4	1	20	127	146	127	148	0.95
2	12	1.9e-05	0.0031	19.0	0.5	3	23	199	220	197	220	0.92
3	12	0.019	3.1	9.6	0.1	1	23	226	248	226	248	0.97
4	12	2.2e-06	0.00036	21.9	2.5	1	21	255	275	255	276	0.95
5	12	2.1e-05	0.0034	18.9	0.9	1	23	287	309	287	309	0.98
6	12	8.1e-06	0.0013	20.2	3.4	1	23	320	342	320	342	0.99
7	12	4.7e-05	0.0077	17.8	0.8	1	23	348	370	348	370	0.97
8	12	6.1e-05	0.01	17.4	0.8	1	23	376	398	376	398	0.98
9	12	2e-06	0.00032	22.1	0.1	3	23	406	426	405	426	0.99
10	12	0.00027	0.045	15.4	3.0	1	23	430	453	430	453	0.97
11	12	0.19	32	6.4	2.3	1	23	484	508	484	508	0.90
12	12	0.73	1.2e+02	4.6	1.6	2	23	514	536	513	536	0.88

Sequence Information

Coding Sequence: ATGAAAATGAAGTCGAAAAGTCTTCGGGTGATGCGACAGAAAATTCCAGGAATAAGTAGTACCGAACCAACACCGGTTTCAACACAACCCGAACAGACTACAAAGACTTCCTTGAATTCATTATTGACCAACGAAGGCCAACAGCAGAACATTTCACTGAATGCTTCCAAAAAACTGCCTACTGATCACTATGTTCTTCAGACAATCAAAAGCGAAAATAACGTAGAGGGGGATATTGATTTTTTGCATACCATTGGTGAAGAAGGCACAGCAAGTGCTGTTAGCGACATTGGAGCCCCTTACGAGGAAGTTTTTGCTATTGAAGAGTTACAAAGCACTGCAGAAAAAGATGAAGCTTGTTTTGAAGAGGTTGTCGAGCATGTCTGCAGTAAATGTTACAGGACGTTTCGACGGTTAACTGGCTTACAAAAACATATTGAATTCTGTCGAATGGACAGCGACTATCAACATCGCAAAGCGGAAATGTTAAAGAACATCCATAAAATTGAAAAGGAGGCAGTCATCATGGAGAAGAAGGACTATTGTTTCTGTTGCGGCGATAGTTATGATACTTTTCATCTTGGTCACATTAACTGCCCGGAATGTACAAAATCATTTAAAAGCCAAAACAGTTACGAGAGACACATTTTCCTTATCCATTCAGAGTTGGATGATTTTCCGTGTGATGTGTGTAATGCGAAACTTCGTAGCGCAGCGCTCTTGGAATTGCATAAAAACCAGCATGCAATGCGTGGAAGACCCTTCGCGTGTCGAGAATGTGGCAAAGAGTTCACACGGTCCTACCATTTAAGGCGCCATCAAAAGTTCTCCTCATGCGGTGGTAAAGAGAGCGAAGCTTTCGAATGTAAAGTTTGTCCCAGAACATTCCTTCGTCTGGATAATCTGCGTTTACATTTGAAAACGCATTTAGGCTCTTATACTGCAAAAAAGGAGGAGTACAGTTGTCCGAGTTGCAAAAAGTGCTTTTACAGCTTGTCAACGTTAAATATTCACGTTCGTACACATACTGGAGAGAGACCATTCGATTGTGATTTATGTGAAAAGAAATTTCCGTCATTGGTTGCCCTAAAGAAGCATCGACGCTATCACACTGGTGAGAGACCATACAGTTGTGCAGTTTGTCACCAAGCATTTGCTGTGAAGGAAGTCCTAAACCGCCACATGAAACGACATACAGGCGAGCGACCGCACGGTTGTCCTGAATGTGGTAAGCGTTTCATTCAAGCGACACAACTGAAAACTCATGCCCGTGTACATCTCCGACCGCATCAGTGCGACGTATGCGAAGCAAAATTTAAAACAGAAAAACAGTTAGAGAAACACAAGAAAAAAGACCACAAAAAACCTCTCATACCGAAGGCAGATCCGAAAGAACCGAAGGAACCGAAATCACGGAAAGGCAAAAAATTAATCACTAAGCGAAAGAGTTTTTTCTGTGCAATCTGTGATCAAACGCTGAAAAGTTATAACACCTACCATGCCCATTTGCAATCAAACAAACATCGCTATCTACAAACGGTCTGTCATATTTGTTTGAAGAACTTCGATTCAGTGAAAAGTCTGGAATTTCACAAGCTCAAGGAACACGAGCACGATGTGGCAAAACACACTGTAGAGGGATCTCCAAAAAAGATTTTAAATCAAACAAATAAATTACCAAAACTAGAAGAAGAGGAAGAAGATGAAGAAGAAGAAGAAGCAGTAGAAGAAGAGGAACAAGAGGACGAAGAAGAAGAGCACGAAGAAGTTGTAGAAGAAGAAGAAGAAGCTGCTTCGTCTAATGTCAATAAAGCTGAAGAATATGATGTGGTTTTTGAAAGAATCGTCAATGAAATTTCAGCCGACGTTGTTGAGAACAATACGGAATCAAATAAATTTATGATAAATACTACTGATCGAGAACATATTGATGATAATATGGATGGCGACACTGTAATGGTTGATAATTTTAAAAAGGAGTTTTTAGAAGAAAACTTTACTGCCACTAACGAAACGTCTACTGCCAATAAAGAAGAAGACGATGGAATGGAAATCGATGCGGCTGAGGATGATGAAAAGCTAAAAGAGAACGTTACCAAATTGTTAGATTTGTTGGTTGACAAAGTAACATTACAGAAATTTGGCTGGCCGAGCAATTCAGAGGAAAACGTGCTTCGTAAAGTTATTGAAAATTGTGGATACGATTTGTCGCAGTGTGATCACTTTGCTGGCAGCGATTATGTGACGCGAATGCGAGAATACGTTAAGCTTTTGTTTACGGTCGTGATTCACAACGATTCCATTAAGGAGCTGCTCAACAATTATTCAATAGATGAAGTCATTGAATATGTGTTAAGCAATGATGATGATGATGATGATGATGACGACGTTGATAGTTAA
Protein Sequence: MKMKSKSLRVMRQKIPGISSTEPTPVSTQPEQTTKTSLNSLLTNEGQQQNISLNASKKLPTDHYVLQTIKSENNVEGDIDFLHTIGEEGTASAVSDIGAPYEEVFAIEELQSTAEKDEACFEEVVEHVCSKCYRTFRRLTGLQKHIEFCRMDSDYQHRKAEMLKNIHKIEKEAVIMEKKDYCFCCGDSYDTFHLGHINCPECTKSFKSQNSYERHIFLIHSELDDFPCDVCNAKLRSAALLELHKNQHAMRGRPFACRECGKEFTRSYHLRRHQKFSSCGGKESEAFECKVCPRTFLRLDNLRLHLKTHLGSYTAKKEEYSCPSCKKCFYSLSTLNIHVRTHTGERPFDCDLCEKKFPSLVALKKHRRYHTGERPYSCAVCHQAFAVKEVLNRHMKRHTGERPHGCPECGKRFIQATQLKTHARVHLRPHQCDVCEAKFKTEKQLEKHKKKDHKKPLIPKADPKEPKEPKSRKGKKLITKRKSFFCAICDQTLKSYNTYHAHLQSNKHRYLQTVCHICLKNFDSVKSLEFHKLKEHEHDVAKHTVEGSPKKILNQTNKLPKLEEEEEDEEEEEAVEEEEQEDEEEEHEEVVEEEEEAASSNVNKAEEYDVVFERIVNEISADVVENNTESNKFMINTTDREHIDDNMDGDTVMVDNFKKEFLEENFTATNETSTANKEEDDGMEIDAAEDDEKLKENVTKLLDLLVDKVTLQKFGWPSNSEENVLRKVIENCGYDLSQCDHFAGSDYVTRMREYVKLLFTVVIHNDSIKELLNNYSIDEVIEYVLSNDDDDDDDDDVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -