Basic Information

Insect: Nephrocerus scutellatus
Gene Symbol: -
Assembly: GCA_947095585.1
Location: OX352761.1:11267694-11281694[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.00025 0.041 15.5 0.2 2 23 317 338 316 338 0.96

2 22 7.1e-05 0.012 17.2 2.7 1 23 345 367 345 367 0.99

3 22 2.8e-05 0.0046 18.5 1.1 2 23 401 422 400 422 0.97

4 22 0.0012 0.19 13.4 1.2 1 23 491 514 491 514 0.96

5 22 3 5e+02 2.6 1.2 1 22 521 542 521 542 0.91

6 22 0.0039 0.64 11.7 1.8 2 23 598 619 597 619 0.96

7 22 0.0016 0.26 13.0 6.4 1 23 626 648 626 648 0.98

8 22 0.0044 0.72 11.6 1.3 2 23 656 677 655 677 0.96

9 22 0.023 3.8 9.3 3.2 1 23 753 776 753 776 0.95

10 22 0.36 59 5.5 1.8 1 22 783 804 783 804 0.93

11 22 0.032 5.3 8.8 0.6 2 23 814 836 813 836 0.96

12 22 0.015 2.5 9.9 2.0 2 21 852 871 851 873 0.93

13 22 1.7e-07 2.8e-05 25.4 0.6 1 23 880 902 880 902 0.98

14 22 0.00086 0.14 13.8 1.4 1 23 1040 1063 1040 1063 0.96

15 22 0.027 4.5 9.1 0.1 1 22 1070 1091 1070 1091 0.96

16 22 0.0016 0.26 13.0 0.5 1 23 1100 1123 1100 1123 0.97

17 22 0.00029 0.047 15.3 0.7 1 23 1139 1161 1139 1161 0.97

18 22 0.00034 0.057 15.0 5.9 1 23 1168 1190 1168 1190 0.99

19 22 0.00018 0.03 15.9 0.6 2 21 1217 1236 1216 1237 0.94

20 22 0.0024 0.4 12.4 0.7 1 23 1295 1318 1295 1318 0.98

21 22 3.1 5e+02 2.6 0.5 2 22 1326 1346 1325 1346 0.94

22 22 0.0037 0.61 11.8 0.8 1 23 1355 1378 1355 1378 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.00025	0.041	15.5	0.2	2	23	317	338	316	338	0.96
2	22	7.1e-05	0.012	17.2	2.7	1	23	345	367	345	367	0.99
3	22	2.8e-05	0.0046	18.5	1.1	2	23	401	422	400	422	0.97
4	22	0.0012	0.19	13.4	1.2	1	23	491	514	491	514	0.96
5	22	3	5e+02	2.6	1.2	1	22	521	542	521	542	0.91
6	22	0.0039	0.64	11.7	1.8	2	23	598	619	597	619	0.96
7	22	0.0016	0.26	13.0	6.4	1	23	626	648	626	648	0.98
8	22	0.0044	0.72	11.6	1.3	2	23	656	677	655	677	0.96
9	22	0.023	3.8	9.3	3.2	1	23	753	776	753	776	0.95
10	22	0.36	59	5.5	1.8	1	22	783	804	783	804	0.93
11	22	0.032	5.3	8.8	0.6	2	23	814	836	813	836	0.96
12	22	0.015	2.5	9.9	2.0	2	21	852	871	851	873	0.93
13	22	1.7e-07	2.8e-05	25.4	0.6	1	23	880	902	880	902	0.98
14	22	0.00086	0.14	13.8	1.4	1	23	1040	1063	1040	1063	0.96
15	22	0.027	4.5	9.1	0.1	1	22	1070	1091	1070	1091	0.96
16	22	0.0016	0.26	13.0	0.5	1	23	1100	1123	1100	1123	0.97
17	22	0.00029	0.047	15.3	0.7	1	23	1139	1161	1139	1161	0.97
18	22	0.00034	0.057	15.0	5.9	1	23	1168	1190	1168	1190	0.99
19	22	0.00018	0.03	15.9	0.6	2	21	1217	1236	1216	1237	0.94
20	22	0.0024	0.4	12.4	0.7	1	23	1295	1318	1295	1318	0.98
21	22	3.1	5e+02	2.6	0.5	2	22	1326	1346	1325	1346	0.94
22	22	0.0037	0.61	11.8	0.8	1	23	1355	1378	1355	1378	0.98

Sequence Information

Coding Sequence: ATGGATGGAAAAATGGATATTACATTTGATTTACTAGAGTCTGATGCAGATAAAATTTGCCGGACCTGTTTTCAGCAAAGCACCCGTTTGCATCCACTATTTACCAAAACGGACAAATTTCCAAAGATGTCTCTGGCTGACATTCTCTTGTACGTTGCAAAAATTGATATAAAAAACACGATAACACAAATAATGCCATCTCATATGTGTGGAAATTGCTCGCGTAAACTAAAGAACGCATACACATTTGTGCTTAAAGCGCAAGAAACGCACGAATGTTTGCGGAAATTTGTGAAGCGTACTGTTGTCAGGCAACCTGACTGCCTTCTGGAGGCACCAATAGACATACCAATACAAAACCCATCTGAATTTTTACAAATCAAAGTGGAGACTGAGGAAATGTGTGTACCATTTACTCCTAATCCAGAAAATAATGATATTGCTTCTGAGTTAATTGATGTTAATTCAGATACAGCAGAATTTAAAAAACACACAAAAGTATTGAACTTGGATTCAGATTGTGAGGATGAAGAGTTGACACTACCAACAAACAAAGGAAAGGCAAGACTTAGCGAAACGAACACTTCGAGGACATCATTGCCAAGTGCGTCTATTGCTAATAAAACTGATGACTTTAAACAAGAGCCAGACACAAACGTTGTACCCTGTGCAAAACCAGTAGATGACCCATCCAAAGAAAACAATCTTTTAGATCCAATTACCGTTCCAATGGGTATGGAATTTTACAACACTTTGTATAATGACTTATATGATGACGGTGCTCCTGGCGGTAATGATGAGTCTTTCGGGGATTCTTCGGACTCAAACTGCGGTTCATCAATAAAAAAGACGAAAAAGAAGTCGTGGCATGACAAACAAAAAGAAAACCCCCATAGAAGACGTTCAACTCGAATGACAAAAGGAACTTTAACATCAGATAAACGTACTGTATGTGATATATGCGGTGAAACATTTGCCTGGAAAAAGGATCTTATTCGACATCAACGTTTTCACGAACCAGTAGGAAACGAGTACGAATGCACTTACTGTAGTAAAATGTTCCTGCGTAAGGATAAGCTAAAGAACCATATAAAAATGCATTTGCGTAATATTAATGAAAATACTAAAGTGCGAAAGCGAACACATCCCGAATGGAATTTCGCTGACAAATTATTTGCCAAGGAACCGTTTAAATGTATCGAATGTAAACTCTGTTCAAAAACATTTACCACTACACAAGAGCTGCGCGAACACATTCGCCAGCATTCCGATCGCGTTTCGATTTATGTCGACAATAACGAAGTAATTAAAGATCTTTATCCGTCTAGTCAGATGGATGACATTATCAATTTGATATGTGATGACATCCAAGACAATCGATGGGCAAAATTCTATTCCATTATCAATATTCATGGCTATGAAATGTGCCTCAGCGATTCGGATGCCGATGGTGATCCGCCTTTGCGCACTTATACATGTGAGATGTGCTCGGAAGTATTCAATCGTAAGTTTAAAGTGTTTGCCCATATCAAAGAGAAACATGCCAGTGAAAAATTACCACATAAATGTCCCGTATGCCGAGTTGAGTTTGTGTGCAAGGAAATGTTTGATATTCATCTGCGGacacagtgtaagaataaagcgaaaaaattcaaatgcatgcggtgtccgggtaaatttatgtgggttgagaatcttgataatcatcaGTGTTCATATCGGTATGCGCCCAACAATGAAGGACTCGATGCCAAAATCAGGATACCAAAAAAGCGAAATAAAgagattttacagtgtgacgtttgtgagaagacgttctattggccacaacacctgaagcgacataaggaatcacacattcccgacggtaagacgcacgagtgtcACTTGTGCTTTCAGAAATTCCTTCGAAGTGATAATCTGAGAACTCACATGCGCACGCATACCAAACGAAGGAAAAAAATTGAATGCCGTTTGTGTGAGACGAAATTCCAGAAGCTCTCTCAACTGCGACAACACATTTTCACCCATTCCGATGGGCTTACTGGTGTAAATTTGCAAAGTGGCATATTTGTTGAGGCTTTCTATCCCAACGGTGCCACACCATCGGAACAAATTTCTCAAATGATACTTGCCGACTTTGCCGCGCAAAACATTGCAAAATTCTATTCGGCTGTCGATGATAGTGGCAATGAATTGAATTTAAGTGATTCCGAAACAGATGCCGAATCTGCGACAGCCATCGAACAACTTGCGTACAAATGTGAATTATGTAACAAAGAATTTAATCGTAGAAAACGTATACTTCTCCATCAACATTCCGAACATGCAAATGAACAGTTGCCGCACGCGTGCACTTTGTGCGAGAAGAAATTCGTATGCATAGAACTGTTGCAAAGGCATTTAAAAACGAACTGCTGCAACGCCAACCGAAAGTGGCAATGCCCGAAGTGTTCGGCGAAATTTGTCTGGCAAGTGAATTTACATAATCATCTGAACATTAAGCACTACGATCCCGAGAACATAATAAGCAACAAAATGGCCAGAAAACTACAGTGTGATGAATGTGAAAAGACATTCGTTTGGCCGAAGGATCTTAATCGGCATAAACGCTGCCATTTGCCTGAGGATGAGAAATTTGAGTGTCCTTTGTGCGATCGCAGATTTAACCGTAAAGACAACATGCAGGCGCACATGAAAGTTCATGGCAATCCCAATACGCCAACTGGTTCGAAATTGTGCGCAAAGAACAAACTGAAAGTATGCGAACTCGAAGAGCATCTTTGCAAGCCGAATGGTTGTAAGATCATCCAATGTAAAATCTGCCTTTCGAAACATATGAAAATCGGCGATTTACGAGCGCATCTTAAGGAGCACAAGGATAACACTTCTTTTGAGAATCGCCAGGAGGAGGTAATGGATATTTCTCTGCTGTTGTATCCCGAGGAGACTCCAATGAGAATGAACGATCTTGTTGAACGTATTAGCAAAGATATCTGCGATAATCGTTTGGATAAATTCTACTCGATAACCAACGAGTTTGGCTTTGAGATGGATTTGAATTATTCCGAAACGGAATCTGATTCAGAGGGAGAAGAAGAAATTATTCGCAATTCTTATGCTTGTGATCTGTGCGCAAAAACATTCGATCGAAGGTATAAACTGTTTGAGCATCAAAATTACTCGCATAAATGGCTGGAAGCGCCACACTCTTGTCAGGTGTGTGAGGCGAGATTTGTTTCGGTGGAAATGCTAAATTTACATTTGAGAACTCAGTGTGAGAATCTGCGTAAACGATTTGCATGTAAACGTTGCCCCTGGAAGTTTATGTGGAAAGATAACCTAAAGAATCACGTGCGAACAGTCCACGCTGAACAAGAGGATGGCAAAATTAAACCCGAAACACAGCGGAAATACACGTGCAAAGTATGCGAGAAAACATTTATGTGGCAAAAAGATCTCACTCGCCACATGGGTATCCATGTGCCAGGCGGTGGTCTCTTCAAGTGTTCATGGTGTCCACGTAAATTCCATAGAAGAGAGAATCTTCATGTGCATCTCAAGAGACACGGAGTTACACCGGAAGGCCTAGCGGCAGTCGAAAGTTATATCAGCTCAACAAGTGGTCCGAACGGCCCCAAACTGGTGACCTGCAAAAGGTGCAATAAACAATTTACAAATATATCCAATTTACGTGATCACATTCAACAATATCCATTTGGAAGTTGCCAAGATCCCACCGTGGACAGTGAGGGTGTATTACAACTGAAGCAGGAAGTAATTCCCTACAAGTCTATTGCTAATTATTCAATAACAAGCACATTAGGTTACGAATTGGATATTGATGATTCTGAAACAGACAATGACACGGATCCGAGTAAATATGTTTGTGAAATTTGCAACAGTGAATTTGGTCGGAAACACGAGATCGCACAGCATCAGCGATCTTTACACAAATACGATGAAATGCCAAAGAAATGCACTAATTGCAATTTCAAGACGGTCTCTGAGTCGATATTGGCATACCACATGAAAacacagtgctgcaacgaggagaagcaatttaaatgtgaaatatgttcgtttaaatttatgtggaaggagaatcttgagaatcacaggcgaataattcatGAAGCTGATGAACATGGCACTGCTTGGGCAGCATCATCTTCATCAAAAGCTGCTGGAATTTGCTTTGCTGTGTTTTTCCTCATCGCACATTCATCCTATGGACACAAGGATGCCGTGACAACTGAAAAATCCATTATAAAGCGAGGATTATCGTTTATCGGCGATGGAAGTTATCAGCCGTATGGTGCTTCTCCATTCCTTCAAACAGGAGCACGATTTGGCGGTGCCAGTTCGTTTGGAAATCCATGGAACTCATTCTCATCGCGCTTGGCCATGGGTCCATCACCCAGTGAAGTGGCAAATGCTATAGCCGCAGCCAAGCAGGCATCGGCAAATGTTTTGATCGCACAGCAGCAAATGCAGGCAGCAAAGGAAAATGTCCTAAATCAACAGCGTATGGCAATGGACAAGGAAACTGCAGCCGCAATCGCAACGCAAAAAAGTGAAGCAGCCGCAGCTATTCAACGTTCGGAAGCAGCTGCTGCAGCTCAATCTGTTGTCCTGGCTCAGCAACGATTGGCCGCTTCTAAATCTGCGGTTTCACACCAGCAAAGAATTGCAGCCGCAAAAGAATCAGATGCCGCTGCGGCCCTTCAACGATCAGCACAAGCTGCAGCAGCTGAAATTCAGAAAACGGAATATGAAGCCGCTAAATTTGGCCAATTCCATCGTGATGGAGCTGCCAGTGCTGCTCACCATTTGACATTCACAAAAGATTCGGCCTTTAGTCCGATAACCGCCGGCACTAATCATGTTTCGAATATTCACAGTTTTGGTCCATGGCAAGACACAGCGGCACTTTTAGGCTCTAGTCTGGGACCGACAAAGGCTCCTGCTGGTTGGTTGTAG
Protein Sequence: MDGKMDITFDLLESDADKICRTCFQQSTRLHPLFTKTDKFPKMSLADILLYVAKIDIKNTITQIMPSHMCGNCSRKLKNAYTFVLKAQETHECLRKFVKRTVVRQPDCLLEAPIDIPIQNPSEFLQIKVETEEMCVPFTPNPENNDIASELIDVNSDTAEFKKHTKVLNLDSDCEDEELTLPTNKGKARLSETNTSRTSLPSASIANKTDDFKQEPDTNVVPCAKPVDDPSKENNLLDPITVPMGMEFYNTLYNDLYDDGAPGGNDESFGDSSDSNCGSSIKKTKKKSWHDKQKENPHRRRSTRMTKGTLTSDKRTVCDICGETFAWKKDLIRHQRFHEPVGNEYECTYCSKMFLRKDKLKNHIKMHLRNINENTKVRKRTHPEWNFADKLFAKEPFKCIECKLCSKTFTTTQELREHIRQHSDRVSIYVDNNEVIKDLYPSSQMDDIINLICDDIQDNRWAKFYSIINIHGYEMCLSDSDADGDPPLRTYTCEMCSEVFNRKFKVFAHIKEKHASEKLPHKCPVCRVEFVCKEMFDIHLRTQCKNKAKKFKCMRCPGKFMWVENLDNHQCSYRYAPNNEGLDAKIRIPKKRNKEILQCDVCEKTFYWPQHLKRHKESHIPDGKTHECHLCFQKFLRSDNLRTHMRTHTKRRKKIECRLCETKFQKLSQLRQHIFTHSDGLTGVNLQSGIFVEAFYPNGATPSEQISQMILADFAAQNIAKFYSAVDDSGNELNLSDSETDAESATAIEQLAYKCELCNKEFNRRKRILLHQHSEHANEQLPHACTLCEKKFVCIELLQRHLKTNCCNANRKWQCPKCSAKFVWQVNLHNHLNIKHYDPENIISNKMARKLQCDECEKTFVWPKDLNRHKRCHLPEDEKFECPLCDRRFNRKDNMQAHMKVHGNPNTPTGSKLCAKNKLKVCELEEHLCKPNGCKIIQCKICLSKHMKIGDLRAHLKEHKDNTSFENRQEEVMDISLLLYPEETPMRMNDLVERISKDICDNRLDKFYSITNEFGFEMDLNYSETESDSEGEEEIIRNSYACDLCAKTFDRRYKLFEHQNYSHKWLEAPHSCQVCEARFVSVEMLNLHLRTQCENLRKRFACKRCPWKFMWKDNLKNHVRTVHAEQEDGKIKPETQRKYTCKVCEKTFMWQKDLTRHMGIHVPGGGLFKCSWCPRKFHRRENLHVHLKRHGVTPEGLAAVESYISSTSGPNGPKLVTCKRCNKQFTNISNLRDHIQQYPFGSCQDPTVDSEGVLQLKQEVIPYKSIANYSITSTLGYELDIDDSETDNDTDPSKYVCEICNSEFGRKHEIAQHQRSLHKYDEMPKKCTNCNFKTVSESILAYHMKTQCCNEEKQFKCEICSFKFMWKENLENHRRIIHEADEHGTAWAASSSSKAAGICFAVFFLIAHSSYGHKDAVTTEKSIIKRGLSFIGDGSYQPYGASPFLQTGARFGGASSFGNPWNSFSSRLAMGPSPSEVANAIAAAKQASANVLIAQQQMQAAKENVLNQQRMAMDKETAAAIATQKSEAAAAIQRSEAAAAAQSVVLAQQRLAASKSAVSHQQRIAAAKESDAAAALQRSAQAAAAEIQKTEYEAAKFGQFHRDGAASAAHHLTFTKDSAFSPITAGTNHVSNIHSFGPWQDTAALLGSSLGPTKAPAGWL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -