Nscu021035.1
Basic Information
- Insect
- Nephrocerus scutellatus
- Gene Symbol
- Zfy1
- Assembly
- GCA_947095585.1
- Location
- OX352763.1:21343456-21347026[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 7.1e-05 0.012 17.2 1.0 2 23 461 482 460 482 0.97 2 16 8e-06 0.0013 20.2 1.2 1 23 488 510 488 510 0.98 3 16 0.0014 0.23 13.1 0.5 1 23 516 539 516 539 0.97 4 16 6.4e-06 0.001 20.5 2.5 1 23 552 574 552 574 0.98 5 16 0.0015 0.25 13.0 0.1 2 23 617 638 616 638 0.95 6 16 0.0002 0.033 15.8 2.5 1 23 644 666 644 666 0.98 7 16 1.2e-05 0.002 19.6 2.5 2 23 810 831 809 831 0.97 8 16 1.3e-06 0.00022 22.6 0.5 1 23 837 859 837 859 0.98 9 16 0.00014 0.022 16.3 0.1 1 23 865 888 865 888 0.97 10 16 0.00022 0.036 15.7 1.2 1 23 899 921 899 921 0.98 11 16 2.7e-05 0.0044 18.5 2.7 1 23 939 961 939 961 0.98 12 16 0.014 2.3 10.0 2.4 1 23 967 989 967 989 0.97 13 16 0.00016 0.026 16.1 0.3 2 23 995 1016 994 1016 0.96 14 16 0.0032 0.52 12.0 0.1 1 23 1024 1047 1024 1047 0.96 15 16 0.0069 1.1 10.9 0.1 3 23 1057 1078 1056 1078 0.92 16 16 0.00071 0.12 14.1 1.3 2 23 1084 1105 1083 1105 0.97
Sequence Information
- Coding Sequence
- ATGACGGGAGTGCGCTTGGATGACGCTGTCTGTCGGGTTTGTTTGAGTTCATCTGGAAACATTAAAATTTTTGATGGCTGCGGAAAGGACGATCAGTTCAGATTCTGCACATCCCTTGAGGCATCCGAAGACGATGGTCTGCCTTCGAAGTTGTGTAAAAAGTGCAACGATCACTTGAAAGTTGCGTACGATTTTCGTTTTCAAGCGATATATGCTGAAAAGTATTTTCGTAAAACGATATTTTTGCCGTCACTAAAAAAGGAACTAAATGCGAGTCAATCTGGAGTCGAAGGCAATGAGGGACAAACATCCATCGAACTTGACGAGAACATGCAGGAGATTGATAAGCTGCTGTCGATTAATACGCATACTGTAACATGTACCGATGAGGCCGAAGATGATTCAGCAGCAAACAATCTGAACAACGATAGTTCGGAATATTATGGACACCATGATGATTATGATGACGATATAAGCCGTGATTGCAGACTTTCCAAGGACAGTGATAAAGCACAGCAGTGTTCTTTAACTACTATTGCCAACATACCTTTAATAATGAACTTTGAGACGGAGAAAAAAGTCAAAATAGAGGAAACTAATAGCGCATCAGTAAAACAGAAGCAGTTTTTATCCAAAATTAGCGTTCCAACATGCAACACGCAAATTCATTCGTATACACCTCTGGATGCAACATCTTTGTCGTATACAGCAACATCTCCATTTTCCAATCAGTCGGTGCACGATTTGCGTACTGAGCAGGATAACTCAGAATCACAGTCACTGCCGATGCAGGAAGTGACTTCTAAAAATGTCTCCCAGTACAATGTGAATGTTGATGGCGTAATAAACTATCCCGGTTACTACACCCAGCACCAACAACATAATATTAACAGCAATTTGTCTTCCACATATGCAACAGGTGTTCATTTGCATACGGGGCCTCCGCATATGCAAGTTCCACACACACTCTACCAAAATATAATTCCCGCCGATGTTTCATCGCCTGTTACCGCTTATAACGATTATTCCCAGACCCAATATTTACCAGTGCCGTCGTCAGTAAGTAATTTCAATCAACAAGCAACATACAGTCAACAATCAACAATTGTTTCGGTGTCAGCATCTGAAACATTAAACACCTCAGCCAATGGCTACAACCTGTTGCCTGTGACATTACACTCGGCTCACATTAATGACATTGTAAATGGTGCAACTGTTAGTGTTGATTCTGTTGTCTCGGAACCAGTAACATACAACTCTGGAACCCCGCCTTTATCTACTATTGCGAAGACAACTAAAGAGCAAAACGAGGATATACTAAACATGGCAAAGGTGAAATCTAAGCGAGAGCCAGATTTGAAGACCTCTAAAGAAAAGATCGAGTGTAACATATGCGGCACAATTTTCACCCATATTAATTCGTTGAAGACTCATTTGCTTAAGCACTCCGGCGAAAAACCATATAAATGTGAATATTGCCAGAAGGCTTTTGCACGAAAAACCGTCCTGAATATCCATCGACGCCTGCATACTGGCGAAAAGCCCTACAAGTGCAACGATTGCATTATGGCTTATGTTACAAAGGAAGCTCTAACCCGTCACAAGCAAAAGGATCATGAGGAAGGGAAGAACTTCCGCAAGGATAAAGTCACCTATATCTGTTCAATTTGCAATAAGTCGCGTTGTTCAAAGTATTCACTAGCTGCCCATATGCGAACGCATGCTTCACAAGCAAGGGAACGTCGACGAATTTCAAAAAAGAAACGTGATACGTCTGCTGTAGTGACAGCAGCAAAGATGCAGACATTTTCGAGTCCGAACAATGGCAGACCAGCAGCAACGTTAAAGTATTGTAAAATCTGTCAACAGGGATTTCCAAATAAATGGGAACTAAGCGCTCATGCTGAATCACATAATCTCAATAAGACGTTTGAGTGTGATCTCTGTAAGCGCACATTCGAAAAAAAGTTTCAGTTGTTGTACCACTTACAAACTCACGATGGTGCAGAAGAGCTTATCAAGAAGAAACTGCAACCTGAACTTAAAAGAGAGGCAAATGTTGAAATAAAAGAGGAAGAGAAAAATGCTAACCAGCAAGCGCAAAAGCAAAAATTAAACGATCGAGTATGTGTAGAAGAATGCAATGAAAGCGATGATGATAAACCAATTGTGCAGCGCCGTCGTCGCGGTCGACCGAAAGGATATAAGGTTAAAAAGAAAAGGAAACGACCTGTTAGTGAATTCGACACAGAATCGAATGATTCAGAAGATGTGAACTGTGATGATGGTGAAAACGTTGAATATTGCGAGAAACCCACCGAAAAAGCTGCACACAAGAAAAAATCTGCCACCGATGCATCCCAATTTTCAAAAGCCCGATCAAAGAGAGAAAATCTTAAGTCTCTGCGATCGGCGGGAAATGTTATAAAATGTCACATATGCGATGCCTTTTTCACCCATCCGACTTCACTTAAAACGCATATGCTCATCCATTCCGGCGAGAGACCTTTCAAGTGCGAAGATTGCGGCAAAGCATTTGCCCGAAAAACAGTGCTTAATATTCACAGACGCCTACACACGGGTGAAAAGCCTTATCAGTGCCCGCTGTGTTCAATGGCGAGTGTAACTAAAGAGGCTTTAATGCGTCACATGTCCAAGGATCACGACGACGAACGAGAGGCCGACCGTATTCGATTTACCTGTGGCATTTGCCATAAAGCGATGGGTACCAAATATTCGCTGCAAGCTCACATGAAACTTCATGAACAACAACAAAAAGAAGGAGGTCCCAATGAAGAGTCTGTACCCATCCAGTTTTCGTGCAAAACATGCGGGGAGACTTTCGATAGCAAGGAAGATTACAGCAAACATATGCACGTACATGACAGGCATCAGAACTTTCAGTGTGACATTTGCCAAATGACTTTTGAGAAAAAGTTTAAACTTTTGTTCCATTTGCAAACACATAAATTGGAAGACATGCCGTGCAAAAAGTGTGGGGAAACCTTTTCGATCAGAGAGGAGCTTATTCAGCACACAAAACTGCATTTTGACAAAAAGAATCTTGACTTTCAGTGCCCAGAATGTGATGTTGGCCTTTATGATACGCGCGATCTTAAACTGCACATGTCCAATATACACGATGTGGCAATGGGCAATTTAAATGCATGTGATATGTGTGGGGAGAGCTATGGCACAGCCGGCGAGTACTACAAACATATGTATGACAAGCACGATGTTATAAATAAGACCTGCAATGAATGTGAAAAATATTTCGATTCGAGAAAGGCCTTCGACAAGCATATTTTGACTCATTACATGTCGTAG
- Protein Sequence
- MTGVRLDDAVCRVCLSSSGNIKIFDGCGKDDQFRFCTSLEASEDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSLKKELNASQSGVEGNEGQTSIELDENMQEIDKLLSINTHTVTCTDEAEDDSAANNLNNDSSEYYGHHDDYDDDISRDCRLSKDSDKAQQCSLTTIANIPLIMNFETEKKVKIEETNSASVKQKQFLSKISVPTCNTQIHSYTPLDATSLSYTATSPFSNQSVHDLRTEQDNSESQSLPMQEVTSKNVSQYNVNVDGVINYPGYYTQHQQHNINSNLSSTYATGVHLHTGPPHMQVPHTLYQNIIPADVSSPVTAYNDYSQTQYLPVPSSVSNFNQQATYSQQSTIVSVSASETLNTSANGYNLLPVTLHSAHINDIVNGATVSVDSVVSEPVTYNSGTPPLSTIAKTTKEQNEDILNMAKVKSKREPDLKTSKEKIECNICGTIFTHINSLKTHLLKHSGEKPYKCEYCQKAFARKTVLNIHRRLHTGEKPYKCNDCIMAYVTKEALTRHKQKDHEEGKNFRKDKVTYICSICNKSRCSKYSLAAHMRTHASQARERRRISKKKRDTSAVVTAAKMQTFSSPNNGRPAATLKYCKICQQGFPNKWELSAHAESHNLNKTFECDLCKRTFEKKFQLLYHLQTHDGAEELIKKKLQPELKREANVEIKEEEKNANQQAQKQKLNDRVCVEECNESDDDKPIVQRRRRGRPKGYKVKKKRKRPVSEFDTESNDSEDVNCDDGENVEYCEKPTEKAAHKKKSATDASQFSKARSKRENLKSLRSAGNVIKCHICDAFFTHPTSLKTHMLIHSGERPFKCEDCGKAFARKTVLNIHRRLHTGEKPYQCPLCSMASVTKEALMRHMSKDHDDEREADRIRFTCGICHKAMGTKYSLQAHMKLHEQQQKEGGPNEESVPIQFSCKTCGETFDSKEDYSKHMHVHDRHQNFQCDICQMTFEKKFKLLFHLQTHKLEDMPCKKCGETFSIREELIQHTKLHFDKKNLDFQCPECDVGLYDTRDLKLHMSNIHDVAMGNLNACDMCGESYGTAGEYYKHMYDKHDVINKTCNECEKYFDSRKAFDKHILTHYMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -